RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 RIT1Q92963 219 aa20.85■□□□□ 0.93
SIX3-201ENST00000260653 YIPF2Q9BWQ6 316 aa20.85■□□□□ 0.93
SIX3-201ENST00000260653 PIGUQ9H490 435 aa20.85■□□□□ 0.93
SIX3-201ENST00000260653 PDP2Q9P2J9 529 aa20.85■□□□□ 0.93
SIX3-201ENST00000260653 A6NHS1 94 aa20.85■□□□□ 0.93
SIX3-201ENST00000260653 MSL3P1P0C860 447 aa20.85■□□□□ 0.93
SIX3-201ENST00000260653 S1PR1P21453 382 aa20.85■□□□□ 0.93
SIX3-201ENST00000260653 MAP4K2Q12851 820 aa20.85■□□□□ 0.93
SIX3-201ENST00000260653 VRK2Q86Y07 508 aa20.85■□□□□ 0.93
SIX3-201ENST00000260653 ZNF786Q8N393 782 aa20.85■□□□□ 0.93
SIX3-201ENST00000260653 CDRT4Q8N9R6 151 aa20.85■□□□□ 0.93
SIX3-201ENST00000260653 PIK3R3Q92569 461 aa20.85■□□□□ 0.93
SIX3-201ENST00000260653 RMND5BQ96G75 393 aaPredicted RBP20.85■□□□□ 0.93
SIX3-201ENST00000260653 NDC1Q9BTX1 674 aa20.85■□□□□ 0.93
SIX3-201ENST00000260653 SERTAD3Q9UJW9 196 aa20.85■□□□□ 0.93
SIX3-201ENST00000260653 KCND3Q9UK17 655 aa20.85■□□□□ 0.93
SIX3-201ENST00000260653 GADD45GO95257 159 aa20.84■□□□□ 0.93
SIX3-201ENST00000260653 IFI6P09912 130 aa20.84■□□□□ 0.93
SIX3-201ENST00000260653 PABPC4LP0CB38 370 aaKnown RBP20.84■□□□□ 0.93
SIX3-201ENST00000260653 HSD17B7P56937 341 aa20.84■□□□□ 0.93
SIX3-201ENST00000260653 SQSTM1Q13501 440 aa20.84■□□□□ 0.93
SIX3-201ENST00000260653 TTC23Q5W5X9 447 aa20.84■□□□□ 0.93
SIX3-201ENST00000260653 PIK3C3Q8NEB9 887 aa20.84■□□□□ 0.93
SIX3-201ENST00000260653 ZNF555Q8NEP9 628 aa20.84■□□□□ 0.93
SIX3-201ENST00000260653 GIPC3Q8TF64 312 aa20.84■□□□□ 0.93
SIX3-201ENST00000260653 KRT84Q9NSB2 600 aa20.84■□□□□ 0.93
SIX3-201ENST00000260653 PCDH17O14917 1159 aa20.84■□□□□ 0.93
SIX3-201ENST00000260653 ALPPP05187 535 aa20.84■□□□□ 0.93
SIX3-201ENST00000260653 ALOX5P09917 674 aa20.84■□□□□ 0.93
SIX3-201ENST00000260653 CYP4B1P13584 511 aa20.84■□□□□ 0.93
SIX3-201ENST00000260653 LIMS1P48059 325 aa20.84■□□□□ 0.93
SIX3-201ENST00000260653 MAPK10P53779 464 aa20.84■□□□□ 0.93
SIX3-201ENST00000260653 ARHGAP11BQ3KRB8 267 aa20.84■□□□□ 0.93
SIX3-201ENST00000260653 ZNF311Q5JNZ3 666 aa20.84■□□□□ 0.93
SIX3-201ENST00000260653 TTC33Q6PID6 262 aaPredicted RBP20.84■□□□□ 0.93
SIX3-201ENST00000260653 PRR23CQ6ZRP0 262 aa20.84■□□□□ 0.93
SIX3-201ENST00000260653 OR10G2Q8NGC3 310 aa20.84■□□□□ 0.93
SIX3-201ENST00000260653 MVB12AQ96EY5 273 aa20.84■□□□□ 0.93
SIX3-201ENST00000260653 DGAT2Q96PD7 388 aa20.84■□□□□ 0.93
SIX3-201ENST00000260653 FEVQ99581 238 aa20.84■□□□□ 0.93
SIX3-201ENST00000260653 RIBC2Q9H4K1 309 aa20.84■□□□□ 0.93
SIX3-201ENST00000260653 NECTIN3Q9NQS3 549 aa20.84■□□□□ 0.93
SIX3-201ENST00000260653 LANCL2Q9NS86 450 aa20.84■□□□□ 0.93
SIX3-201ENST00000260653 RLIMQ9NVW2 624 aa20.84■□□□□ 0.93
SIX3-201ENST00000260653 MYRFQ9Y2G1 1151 aa20.84■□□□□ 0.93
SIX3-201ENST00000260653 H3BNH8 94 aa20.83■□□□□ 0.93
SIX3-201ENST00000260653 TOX3O15405 576 aaPredicted RBP20.83■□□□□ 0.93
SIX3-201ENST00000260653 LGI1O95970 557 aa20.83■□□□□ 0.93
SIX3-201ENST00000260653 SSTR4P31391 388 aa20.83■□□□□ 0.93
SIX3-201ENST00000260653 ZNF155Q12901 538 aaPredicted RBP20.83■□□□□ 0.93
SIX3-201ENST00000260653 TYW3Q6IPR3 259 aaKnown RBP20.83■□□□□ 0.93
SIX3-201ENST00000260653 PHF10Q8WUB8 498 aaKnown RBP20.83■□□□□ 0.93
SIX3-201ENST00000260653 NAT6Q93015 286 aa20.83■□□□□ 0.93
SIX3-201ENST00000260653 SDF2Q99470 211 aa20.83■□□□□ 0.93
SIX3-201ENST00000260653 PINK1Q9BXM7 581 aa20.83■□□□□ 0.93
SIX3-201ENST00000260653 DUSP22Q9NRW4 184 aa20.83■□□□□ 0.93
SIX3-201ENST00000260653 WDR45Q9Y484 360 aa20.83■□□□□ 0.93
SIX3-201ENST00000260653 MAP3K8P41279 467 aa20.83■□□□□ 0.92
SIX3-201ENST00000260653 ANGPT1Q15389 498 aa20.83■□□□□ 0.92
SIX3-201ENST00000260653 MICAQ29983 383 aa20.83■□□□□ 0.92
SIX3-201ENST00000260653 SLC5A8Q8N695 610 aa20.83■□□□□ 0.92
SIX3-201ENST00000260653 COX18Q8N8Q8 333 aa20.83■□□□□ 0.92
SIX3-201ENST00000260653 OR9Q2Q8NGE9 314 aa20.83■□□□□ 0.92
SIX3-201ENST00000260653 GPR151Q8TDV0 419 aa20.83■□□□□ 0.92
SIX3-201ENST00000260653 LRRN3Q9H3W5 708 aa20.83■□□□□ 0.92
SIX3-201ENST00000260653 SLC9A8Q9Y2E8 581 aa20.83■□□□□ 0.92
SIX3-201ENST00000260653 LOC100130705A0A1B0GUX0 176 aa20.82■□□□□ 0.92
SIX3-201ENST00000260653 STT3AP46977 705 aa20.82■□□□□ 0.92
SIX3-201ENST00000260653 HMGA2P52926 109 aa20.82■□□□□ 0.92
SIX3-201ENST00000260653 ZNF528Q3MIS6 628 aa20.82■□□□□ 0.92
SIX3-201ENST00000260653 DCST2Q5T1A1 773 aa20.82■□□□□ 0.92
SIX3-201ENST00000260653 C1orf189Q5VU69 101 aa20.82■□□□□ 0.92
SIX3-201ENST00000260653 OR6T1Q8NGN1 323 aa20.82■□□□□ 0.92
SIX3-201ENST00000260653 NMNAT1Q9HAN9 279 aaPredicted RBP20.82■□□□□ 0.92
SIX3-201ENST00000260653 FANCEQ9HB96 536 aa20.82■□□□□ 0.92
SIX3-201ENST00000260653 CHST2Q9Y4C5 530 aa20.82■□□□□ 0.92
SIX3-201ENST00000260653 ZNF267Q14586 743 aaPredicted RBP20.82■□□□□ 0.92
SIX3-201ENST00000260653 TCEAL6Q6IPX3 200 aa20.82■□□□□ 0.92
SIX3-201ENST00000260653 ZCCHC12Q6PEW1 402 aa20.82■□□□□ 0.92
SIX3-201ENST00000260653 ARHGAP22Q7Z5H3 698 aa20.82■□□□□ 0.92
SIX3-201ENST00000260653 OR4D9Q8NGE8 314 aa20.82■□□□□ 0.92
SIX3-201ENST00000260653 IFI44Q8TCB0 444 aa20.82■□□□□ 0.92
SIX3-201ENST00000260653 TCEAL3Q969E4 200 aa20.82■□□□□ 0.92
SIX3-201ENST00000260653 STACQ99469 402 aa20.82■□□□□ 0.92
SIX3-201ENST00000260653 FBXO34Q9NWN3 711 aa20.82■□□□□ 0.92
SIX3-201ENST00000260653 CHCHD3Q9NX63 227 aaKnown RBP20.82■□□□□ 0.92
SIX3-201ENST00000260653 IGHV5-10-1A0A0J9YXX1 117 aa20.81■□□□□ 0.92
SIX3-201ENST00000260653 CENPVL1A0A0U1RR11 272 aa20.81■□□□□ 0.92
SIX3-201ENST00000260653 ITGAMP11215 1152 aa20.81■□□□□ 0.92
SIX3-201ENST00000260653 ATP6V1B1P15313 513 aa20.81■□□□□ 0.92
SIX3-201ENST00000260653 EPHA2P29317 976 aa20.81■□□□□ 0.92
SIX3-201ENST00000260653 COLEC12Q5KU26 742 aa20.81■□□□□ 0.92
SIX3-201ENST00000260653 TSPYL5Q86VY4 417 aaPredicted RBP20.81■□□□□ 0.92
SIX3-201ENST00000260653 C8orf59Q8N0T1 100 aaPredicted RBP20.81■□□□□ 0.92
SIX3-201ENST00000260653 TAGAPQ8N103 731 aa20.81■□□□□ 0.92
SIX3-201ENST00000260653 OR52P1PQ8NH57 321 aa20.81■□□□□ 0.92
SIX3-201ENST00000260653 ALPK1Q96QP1 1244 aa20.81■□□□□ 0.92
SIX3-201ENST00000260653 CNPPD1Q9BV87 410 aa20.81■□□□□ 0.92
SIX3-201ENST00000260653 ZNF350Q9GZX5 532 aa20.81■□□□□ 0.92
SIX3-201ENST00000260653 GPR55Q9Y2T6 319 aaPredicted RBP20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms