RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 SHC2P98077 582 aa13.76□□□□□ -0.21
TRAFD1-201ENST00000257604 MICAQ29983 383 aa13.76□□□□□ -0.21
TRAFD1-201ENST00000257604 EOGTQ5NDL2 527 aa13.76□□□□□ -0.21
TRAFD1-201ENST00000257604 DCST1Q5T197 706 aa13.76□□□□□ -0.21
TRAFD1-201ENST00000257604 FAM92BQ6ZTR7 304 aa13.76□□□□□ -0.21
TRAFD1-201ENST00000257604 ADAMTS15Q8TE58 950 aa13.76□□□□□ -0.21
TRAFD1-201ENST00000257604 APH1BQ8WW43 257 aa13.76□□□□□ -0.21
TRAFD1-201ENST00000257604 ZNF566Q969W8 418 aa13.76□□□□□ -0.21
TRAFD1-201ENST00000257604 ITPAQ9BY32 194 aa13.76□□□□□ -0.21
TRAFD1-201ENST00000257604 KIR3DX1Q9H7L2 352 aa13.76□□□□□ -0.21
TRAFD1-201ENST00000257604 DDX31Q9H8H2 851 aaKnown RBP13.76□□□□□ -0.21
TRAFD1-201ENST00000257604 P2RX2Q9UBL9 471 aa13.76□□□□□ -0.21
TRAFD1-201ENST00000257604 IFT52Q9Y366 437 aa13.76□□□□□ -0.21
TRAFD1-201ENST00000257604 MTCH2Q9Y6C9 303 aa13.76□□□□□ -0.21
TRAFD1-201ENST00000257604 ENPP4Q9Y6X5 453 aa13.76□□□□□ -0.21
TRAFD1-201ENST00000257604 DSCR3O14972 297 aa13.75□□□□□ -0.21
TRAFD1-201ENST00000257604 HYAL3O43820 417 aaPredicted RBP13.75□□□□□ -0.21
TRAFD1-201ENST00000257604 GMFGO60234 142 aa13.75□□□□□ -0.21
TRAFD1-201ENST00000257604 NR2F6P10588 404 aa13.75□□□□□ -0.21
TRAFD1-201ENST00000257604 S100A5P33763 92 aa13.75□□□□□ -0.21
TRAFD1-201ENST00000257604 MPIP34949 423 aa13.75□□□□□ -0.21
TRAFD1-201ENST00000257604 CNR2P34972 360 aa13.75□□□□□ -0.21
TRAFD1-201ENST00000257604 LSSP48449 732 aa13.75□□□□□ -0.21
TRAFD1-201ENST00000257604 EXOSC7Q15024 291 aaKnown RBP13.75□□□□□ -0.21
TRAFD1-201ENST00000257604 MED22Q15528 200 aa13.75□□□□□ -0.21
TRAFD1-201ENST00000257604 ZMAT1Q5H9K5 638 aa13.75□□□□□ -0.21
TRAFD1-201ENST00000257604 ARMC6Q6NXE6 501 aa13.75□□□□□ -0.21
TRAFD1-201ENST00000257604 RRM2BQ7LG56 351 aa13.75□□□□□ -0.21
TRAFD1-201ENST00000257604 FBLIM1Q8WUP2 373 aa13.75□□□□□ -0.21
TRAFD1-201ENST00000257604 SLC38A4Q969I6 547 aa13.75□□□□□ -0.21
TRAFD1-201ENST00000257604 MTERF3Q96E29 417 aa13.75□□□□□ -0.21
TRAFD1-201ENST00000257604 LMAN1LQ9HAT1 526 aa13.75□□□□□ -0.21
TRAFD1-201ENST00000257604 MS4A12Q9NXJ0 267 aa13.75□□□□□ -0.21
TRAFD1-201ENST00000257604 TVP23BQ9NYZ1 205 aa13.75□□□□□ -0.21
TRAFD1-201ENST00000257604 CASC3O15234 703 aaKnown RBP13.75□□□□□ -0.21
TRAFD1-201ENST00000257604 UGT2B17O75795 530 aa13.75□□□□□ -0.21
TRAFD1-201ENST00000257604 CHRM4P08173 479 aa13.75□□□□□ -0.21
TRAFD1-201ENST00000257604 ERGP11308 486 aa13.75□□□□□ -0.21
TRAFD1-201ENST00000257604 HNRNPFP52597 415 aaKnown RBP13.75□□□□□ -0.21
TRAFD1-201ENST00000257604 PTGES3Q15185 160 aaKnown RBP13.75□□□□□ -0.21
TRAFD1-201ENST00000257604 IQCCQ4KMZ1 466 aa13.75□□□□□ -0.21
TRAFD1-201ENST00000257604 TRMT12Q53H54 448 aaKnown RBP13.75□□□□□ -0.21
TRAFD1-201ENST00000257604 FIGNL1Q6PIW4 674 aa13.75□□□□□ -0.21
TRAFD1-201ENST00000257604 TMEM184AQ6ZMB5 413 aa13.75□□□□□ -0.21
TRAFD1-201ENST00000257604 GPR155Q7Z3F1 870 aa13.75□□□□□ -0.21
TRAFD1-201ENST00000257604 PRSS58Q8IYP2 241 aa13.75□□□□□ -0.21
TRAFD1-201ENST00000257604 TSTD1Q8NFU3 115 aa13.75□□□□□ -0.21
TRAFD1-201ENST00000257604 OR6T1Q8NGN1 323 aa13.75□□□□□ -0.21
TRAFD1-201ENST00000257604 EFHD2Q96C19 240 aaPredicted RBP13.75□□□□□ -0.21
TRAFD1-201ENST00000257604 RAB11FIP5Q9BXF6 653 aa13.75□□□□□ -0.21
TRAFD1-201ENST00000257604 CPNE5Q9HCH3 593 aa13.75□□□□□ -0.21
TRAFD1-201ENST00000257604 RABL2AQ9UBK7 228 aaPredicted RBP13.75□□□□□ -0.21
TRAFD1-201ENST00000257604 METTL15A6NJ78 407 aa13.75□□□□□ -0.21
TRAFD1-201ENST00000257604 GNB5O14775 395 aa13.75□□□□□ -0.21
TRAFD1-201ENST00000257604 SEMA7AO75326 666 aa13.75□□□□□ -0.21
TRAFD1-201ENST00000257604 KRT8P05787 483 aa13.75□□□□□ -0.21
TRAFD1-201ENST00000257604 FHP07954 510 aa13.75□□□□□ -0.21
TRAFD1-201ENST00000257604 PCBP4P57723 403 aaKnown RBP13.75□□□□□ -0.21
TRAFD1-201ENST00000257604 IL18R1Q13478 541 aa13.75□□□□□ -0.21
TRAFD1-201ENST00000257604 E2F2Q14209 437 aa13.75□□□□□ -0.21
TRAFD1-201ENST00000257604 SAXO2Q658L1 398 aa13.75□□□□□ -0.21
TRAFD1-201ENST00000257604 TCTN3Q6NUS6 607 aa13.75□□□□□ -0.21
TRAFD1-201ENST00000257604 PRSS48Q7RTY5 328 aa13.75□□□□□ -0.21
TRAFD1-201ENST00000257604 IQCHQ86VS3 1027 aa13.75□□□□□ -0.21
TRAFD1-201ENST00000257604 KRT73Q86Y46 540 aa13.75□□□□□ -0.21
TRAFD1-201ENST00000257604 OR52E4Q8NGH9 312 aa13.75□□□□□ -0.21
TRAFD1-201ENST00000257604 GOT1L1Q8NHS2 421 aaPredicted RBP13.75□□□□□ -0.21
TRAFD1-201ENST00000257604 TXNDC15Q96J42 360 aa13.75□□□□□ -0.21
TRAFD1-201ENST00000257604 CDADC1Q9BWV3 514 aa13.75□□□□□ -0.21
TRAFD1-201ENST00000257604 EHD3Q9NZN3 535 aa13.75□□□□□ -0.21
TRAFD1-201ENST00000257604 NDRG4Q9ULP0 352 aaKnown RBP13.75□□□□□ -0.21
TRAFD1-201ENST00000257604 PADI2Q9Y2J8 665 aa13.75□□□□□ -0.21
TRAFD1-201ENST00000257604 ASB4Q9Y574 426 aa13.75□□□□□ -0.21
TRAFD1-201ENST00000257604 H0YGG7 62 aa13.74□□□□□ -0.21
TRAFD1-201ENST00000257604 TNFP01375 233 aa13.74□□□□□ -0.21
TRAFD1-201ENST00000257604 CKMT1AP12532 417 aa13.74□□□□□ -0.21
TRAFD1-201ENST00000257604 ARF3P61204 181 aaPredicted RBP13.74□□□□□ -0.21
TRAFD1-201ENST00000257604 HHEXQ03014 270 aa13.74□□□□□ -0.21
TRAFD1-201ENST00000257604 RBBP4Q09028 425 aa13.74□□□□□ -0.21
TRAFD1-201ENST00000257604 ZNF311Q5JNZ3 666 aa13.74□□□□□ -0.21
TRAFD1-201ENST00000257604 USP43Q70EL4 1123 aa13.74□□□□□ -0.21
TRAFD1-201ENST00000257604 PIK3R3Q92569 461 aa13.74□□□□□ -0.21
TRAFD1-201ENST00000257604 OR6C2Q9NZP2 312 aa13.74□□□□□ -0.21
TRAFD1-201ENST00000257604 CNIH4Q9P003 139 aa13.74□□□□□ -0.21
TRAFD1-201ENST00000257604 HCN3Q9P1Z3 774 aa13.74□□□□□ -0.21
TRAFD1-201ENST00000257604 FBXL21Q9UKT6 434 aa13.74□□□□□ -0.21
TRAFD1-201ENST00000257604 GPR52Q9Y2T5 361 aa13.74□□□□□ -0.21
TRAFD1-201ENST00000257604 HCN4Q9Y3Q4 1203 aa13.74□□□□□ -0.21
TRAFD1-201ENST00000257604 DYRK3O43781 588 aa13.74□□□□□ -0.21
TRAFD1-201ENST00000257604 IDH3BO43837 385 aa13.74□□□□□ -0.21
TRAFD1-201ENST00000257604 CSF2P04141 144 aa13.74□□□□□ -0.21
TRAFD1-201ENST00000257604 MAT1AQ00266 395 aaKnown RBP13.74□□□□□ -0.21
TRAFD1-201ENST00000257604 C10orf62Q5T681 223 aaPredicted RBP13.74□□□□□ -0.21
TRAFD1-201ENST00000257604 AVL9Q8NBF6 648 aa13.74□□□□□ -0.21
TRAFD1-201ENST00000257604 TTLQ8NG68 377 aa13.74□□□□□ -0.21
TRAFD1-201ENST00000257604 NACC2Q96BF6 587 aa13.74□□□□□ -0.21
TRAFD1-201ENST00000257604 DNAJA3Q96EY1 480 aa13.74□□□□□ -0.21
TRAFD1-201ENST00000257604 TMEM38AQ9H6F2 299 aa13.74□□□□□ -0.21
TRAFD1-201ENST00000257604 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.74□□□□□ -0.21
TRAFD1-201ENST00000257604 AP1M2Q9Y6Q5 423 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms