RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 RBMXP38159 391 aaKnown RBP17.96■□□□□ 0.47
PTPRE-201ENST00000254667 EFR3AQ14156 821 aa17.96■□□□□ 0.47
PTPRE-201ENST00000254667 KIAA0895LQ68EN5 471 aa17.96■□□□□ 0.47
PTPRE-201ENST00000254667 ZNF761Q86XN6 746 aaPredicted RBP17.96■□□□□ 0.47
PTPRE-201ENST00000254667 ASB11Q8WXH4 323 aa17.96■□□□□ 0.47
PTPRE-201ENST00000254667 LGALS12Q96DT0 336 aa17.96■□□□□ 0.47
PTPRE-201ENST00000254667 MYH8P13535 1937 aa17.96■□□□□ 0.47
PTPRE-201ENST00000254667 C17orf113A0A1B0GUU1 675 aa17.96■□□□□ 0.47
PTPRE-201ENST00000254667 SCGB1D2O95969 90 aa17.96■□□□□ 0.47
PTPRE-201ENST00000254667 ATXN1LP0C7T5 689 aaKnown RBP17.96■□□□□ 0.47
PTPRE-201ENST00000254667 OTX2P32243 289 aa17.96■□□□□ 0.47
PTPRE-201ENST00000254667 CTSCP53634 463 aa17.96■□□□□ 0.47
PTPRE-201ENST00000254667 NR0B2Q15466 257 aa17.96■□□□□ 0.47
PTPRE-201ENST00000254667 TMEM69Q5SWH9 247 aa17.96■□□□□ 0.47
PTPRE-201ENST00000254667 LYSMD4Q5XG99 296 aa17.96■□□□□ 0.47
PTPRE-201ENST00000254667 KLBQ86Z14 1044 aa17.96■□□□□ 0.47
PTPRE-201ENST00000254667 SFXN5Q8TD22 340 aa17.96■□□□□ 0.47
PTPRE-201ENST00000254667 AKAP1Q92667 903 aaKnown RBP eCLIP17.96■□□□□ 0.47
PTPRE-201ENST00000254667 LIN28AQ9H9Z2 209 aaKnown RBP17.96■□□□□ 0.47
PTPRE-201ENST00000254667 DNMT3BQ9UBC3 853 aaKnown RBP17.96■□□□□ 0.47
PTPRE-201ENST00000254667 ISPDA4D126 451 aa17.96■□□□□ 0.47
PTPRE-201ENST00000254667 ADAM12O43184 909 aa17.96■□□□□ 0.47
PTPRE-201ENST00000254667 NFATC4Q14934 902 aa17.96■□□□□ 0.47
PTPRE-201ENST00000254667 ZNF181Q2M3W8 571 aa17.96■□□□□ 0.47
PTPRE-201ENST00000254667 PAGE3Q5JUK9 113 aa17.96■□□□□ 0.47
PTPRE-201ENST00000254667 CST9Q5W186 159 aa17.96■□□□□ 0.47
PTPRE-201ENST00000254667 PRSS48Q7RTY5 328 aa17.96■□□□□ 0.47
PTPRE-201ENST00000254667 NAXEQ8NCW5 288 aa17.96■□□□□ 0.47
PTPRE-201ENST00000254667 TMEM121BQ9BXQ6 578 aaPredicted RBP17.96■□□□□ 0.47
PTPRE-201ENST00000254667 ENY2Q9NPA8 101 aa17.96■□□□□ 0.47
PTPRE-201ENST00000254667 TMEM181Q9P2C4 612 aa17.96■□□□□ 0.47
PTPRE-201ENST00000254667 KCNIP3Q9Y2W7 256 aa17.96■□□□□ 0.47
PTPRE-201ENST00000254667 GGT2P36268 569 aa17.96■□□□□ 0.47
PTPRE-201ENST00000254667 FOXA1P55317 472 aa17.96■□□□□ 0.47
PTPRE-201ENST00000254667 PSMA6P60900 246 aaKnown RBP17.96■□□□□ 0.47
PTPRE-201ENST00000254667 CD83Q01151 205 aa17.96■□□□□ 0.47
PTPRE-201ENST00000254667 CHRFAM7AQ494W8 412 aa17.96■□□□□ 0.47
PTPRE-201ENST00000254667 AIFM2Q9BRQ8 373 aa17.96■□□□□ 0.47
PTPRE-201ENST00000254667 ACOT13Q9NPJ3 140 aa17.96■□□□□ 0.47
PTPRE-201ENST00000254667 INMT-MINDY4F8WBC2 141 aa17.96■□□□□ 0.46
PTPRE-201ENST00000254667 UBL4AP11441 157 aa17.96■□□□□ 0.46
PTPRE-201ENST00000254667 CD6P30203 668 aa17.96■□□□□ 0.46
PTPRE-201ENST00000254667 GJA8P48165 433 aa17.96■□□□□ 0.46
PTPRE-201ENST00000254667 SHFQ7M4L6 423 aa17.96■□□□□ 0.46
PTPRE-201ENST00000254667 TMPRSS12Q86WS5 348 aa17.96■□□□□ 0.46
PTPRE-201ENST00000254667 CRB3Q9BUF7 120 aa17.96■□□□□ 0.46
PTPRE-201ENST00000254667 POTEKPQ9BYX7 375 aa17.96■□□□□ 0.46
PTPRE-201ENST00000254667 SLC5A7Q9GZV3 580 aa17.96■□□□□ 0.46
PTPRE-201ENST00000254667 APOL3O95236 402 aa17.95■□□□□ 0.46
PTPRE-201ENST00000254667 C1orf105O95561 183 aa17.95■□□□□ 0.46
PTPRE-201ENST00000254667 CD3GP09693 182 aa17.95■□□□□ 0.46
PTPRE-201ENST00000254667 PET100P0DJ07 73 aa17.95■□□□□ 0.46
PTPRE-201ENST00000254667 MC3RP41968 323 aa17.95■□□□□ 0.46
PTPRE-201ENST00000254667 LEG1Q6P5S2 330 aa17.95■□□□□ 0.46
PTPRE-201ENST00000254667 UEVLDQ8IX04 471 aa17.95■□□□□ 0.46
PTPRE-201ENST00000254667 OR9A2Q8NGT5 310 aa17.95■□□□□ 0.46
PTPRE-201ENST00000254667 GATAD2BQ8WXI9 593 aa17.95■□□□□ 0.46
PTPRE-201ENST00000254667 ATOH8Q96SQ7 321 aa17.95■□□□□ 0.46
PTPRE-201ENST00000254667 ACPTQ9BZG2 426 aa17.95■□□□□ 0.46
PTPRE-201ENST00000254667 ATG5Q9H1Y0 275 aa17.95■□□□□ 0.46
PTPRE-201ENST00000254667 C13orf42A0A1B0GVH6 325 aa17.95■□□□□ 0.46
PTPRE-201ENST00000254667 C17orf105B2RV13 164 aa17.95■□□□□ 0.46
PTPRE-201ENST00000254667 HRGP04196 525 aa17.95■□□□□ 0.46
PTPRE-201ENST00000254667 GJA4P35212 333 aa17.95■□□□□ 0.46
PTPRE-201ENST00000254667 GTDC1Q4AE62 458 aa17.95■□□□□ 0.46
PTPRE-201ENST00000254667 ABHD17BQ5VST6 288 aa17.95■□□□□ 0.46
PTPRE-201ENST00000254667 NADSYN1Q6IA69 706 aa17.95■□□□□ 0.46
PTPRE-201ENST00000254667 DTWD1Q8N5C7 304 aa17.95■□□□□ 0.46
PTPRE-201ENST00000254667 C2orf42Q9NWW7 574 aa17.95■□□□□ 0.46
PTPRE-201ENST00000254667 RIMS3Q9UJD0 308 aa17.95■□□□□ 0.46
PTPRE-201ENST00000254667 PCDHGA3Q9Y5H0 932 aa17.95■□□□□ 0.46
PTPRE-201ENST00000254667 SMIM30A4D0T7 59 aa17.95■□□□□ 0.46
PTPRE-201ENST00000254667 FOLR3P41439 243 aa17.95■□□□□ 0.46
PTPRE-201ENST00000254667 DCDC5Q6ZRR9 648 aa17.95■□□□□ 0.46
PTPRE-201ENST00000254667 DOK4Q8TEW6 326 aa17.95■□□□□ 0.46
PTPRE-201ENST00000254667 HHIPQ96QV1 700 aa17.95■□□□□ 0.46
PTPRE-201ENST00000254667 BCL7BQ9BQE9 202 aa17.95■□□□□ 0.46
PTPRE-201ENST00000254667 PRSS21Q9Y6M0 314 aa17.95■□□□□ 0.46
PTPRE-201ENST00000254667 PIGBOS1A0A0B4J2F0 54 aa17.95■□□□□ 0.46
PTPRE-201ENST00000254667 RGRP47804 291 aa17.95■□□□□ 0.46
PTPRE-201ENST00000254667 ENTPD1P49961 510 aa17.95■□□□□ 0.46
PTPRE-201ENST00000254667 CTXN1P60606 82 aa17.95■□□□□ 0.46
PTPRE-201ENST00000254667 YPEL5P62699 121 aa17.95■□□□□ 0.46
PTPRE-201ENST00000254667 RUNDC3AQ59EK9 446 aa17.95■□□□□ 0.46
PTPRE-201ENST00000254667 SYCE2Q6PIF2 218 aa17.95■□□□□ 0.46
PTPRE-201ENST00000254667 TMEM173Q86WV6 379 aaPredicted RBP17.95■□□□□ 0.46
PTPRE-201ENST00000254667 MMP2P08253 660 aa17.94■□□□□ 0.46
PTPRE-201ENST00000254667 CDKN2CP42773 168 aa17.94■□□□□ 0.46
PTPRE-201ENST00000254667 EMP2P54851 167 aa17.94■□□□□ 0.46
PTPRE-201ENST00000254667 CLDN2P57739 230 aa17.94■□□□□ 0.46
PTPRE-201ENST00000254667 DUS1LQ6P1R4 473 aaKnown RBP17.94■□□□□ 0.46
PTPRE-201ENST00000254667 MCATQ8IVS2 390 aaKnown RBP17.94■□□□□ 0.46
PTPRE-201ENST00000254667 OR13C3Q8NGS6 347 aa17.94■□□□□ 0.46
PTPRE-201ENST00000254667 NAT6Q93015 286 aa17.94■□□□□ 0.46
PTPRE-201ENST00000254667 CIDECQ96AQ7 238 aaPredicted RBP17.94■□□□□ 0.46
PTPRE-201ENST00000254667 PITX2Q99697 317 aa17.94■□□□□ 0.46
PTPRE-201ENST00000254667 C5AR2Q9P296 337 aa17.94■□□□□ 0.46
PTPRE-201ENST00000254667 MAGED1Q9Y5V3 778 aaPredicted RBP17.94■□□□□ 0.46
PTPRE-201ENST00000254667 KIAA0513O60268 411 aa17.94■□□□□ 0.46
PTPRE-201ENST00000254667 UCHL1P09936 223 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms