RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 ABATP80404 500 aa11.28□□□□□ -0.6
USHBP1-201ENST00000252597 KLHL22Q53GT1 634 aa11.28□□□□□ -0.6
USHBP1-201ENST00000252597 FAM26DQ5JW98 314 aa11.28□□□□□ -0.6
USHBP1-201ENST00000252597 SFRP4Q6FHJ7 346 aaPredicted RBP11.28□□□□□ -0.6
USHBP1-201ENST00000252597 VN1R5Q7Z5H4 357 aa11.28□□□□□ -0.6
USHBP1-201ENST00000252597 ADGRD2Q7Z7M1 963 aa11.28□□□□□ -0.6
USHBP1-201ENST00000252597 OR51A7Q8NH64 312 aa11.28□□□□□ -0.6
USHBP1-201ENST00000252597 SETD6Q8TBK2 473 aa11.28□□□□□ -0.6
USHBP1-201ENST00000252597 ORAI1Q96D31 301 aa11.28□□□□□ -0.6
USHBP1-201ENST00000252597 ISG20L2Q9H9L3 353 aaKnown RBP11.28□□□□□ -0.6
USHBP1-201ENST00000252597 CACYBPQ9HB71 228 aaKnown RBP11.28□□□□□ -0.6
USHBP1-201ENST00000252597 EVA1BQ9NVM1 165 aa11.28□□□□□ -0.6
USHBP1-201ENST00000252597 NCKAP1Q9Y2A7 1128 aa11.28□□□□□ -0.6
USHBP1-201ENST00000252597 SLC16A5O15375 505 aa11.27□□□□□ -0.6
USHBP1-201ENST00000252597 TGM5O43548 720 aa11.27□□□□□ -0.6
USHBP1-201ENST00000252597 FGBP02675 491 aa11.27□□□□□ -0.6
USHBP1-201ENST00000252597 ACP5P13686 325 aa11.27□□□□□ -0.6
USHBP1-201ENST00000252597 CCNJQ5T5M9 372 aa11.27□□□□□ -0.6
USHBP1-201ENST00000252597 PXDC1Q5TGL8 231 aa11.27□□□□□ -0.6
USHBP1-201ENST00000252597 SLC9B2Q86UD5 537 aa11.27□□□□□ -0.6
USHBP1-201ENST00000252597 GDPD1Q8N9F7 314 aa11.27□□□□□ -0.6
USHBP1-201ENST00000252597 ZNF354BQ96LW1 612 aa11.27□□□□□ -0.6
USHBP1-201ENST00000252597 FKBP14Q9NWM8 211 aa11.27□□□□□ -0.6
USHBP1-201ENST00000252597 PRELID1Q9Y255 219 aa11.27□□□□□ -0.6
USHBP1-201ENST00000252597 KCNK6Q9Y257 313 aa11.27□□□□□ -0.6
USHBP1-201ENST00000252597 GABRPO00591 440 aa11.27□□□□□ -0.61
USHBP1-201ENST00000252597 LANCL1O43813 399 aa11.27□□□□□ -0.61
USHBP1-201ENST00000252597 PIP5K1CO60331 668 aa11.27□□□□□ -0.61
USHBP1-201ENST00000252597 CTSLP07711 333 aa11.27□□□□□ -0.61
USHBP1-201ENST00000252597 SAGP10523 405 aaPredicted RBP11.27□□□□□ -0.61
USHBP1-201ENST00000252597 HOXB3P14651 431 aaPredicted RBP11.27□□□□□ -0.61
USHBP1-201ENST00000252597 RPL3P39023 403 aaKnown RBP11.27□□□□□ -0.61
USHBP1-201ENST00000252597 CCR6P51684 374 aa11.27□□□□□ -0.61
USHBP1-201ENST00000252597 VSX2P58304 361 aaPredicted RBP11.27□□□□□ -0.61
USHBP1-201ENST00000252597 NDUFAF5Q5TEU4 345 aa11.27□□□□□ -0.61
USHBP1-201ENST00000252597 BHLHB9Q6PI77 547 aa11.27□□□□□ -0.61
USHBP1-201ENST00000252597 LIPIQ6XZB0 460 aa11.27□□□□□ -0.61
USHBP1-201ENST00000252597 FAM83HQ6ZRV2 1179 aaPredicted RBP11.27□□□□□ -0.61
USHBP1-201ENST00000252597 FAM92BQ6ZTR7 304 aa11.27□□□□□ -0.61
USHBP1-201ENST00000252597 SERPINA12Q8IW75 414 aa11.27□□□□□ -0.61
USHBP1-201ENST00000252597 OR56A3Q8NH54 315 aa11.27□□□□□ -0.61
USHBP1-201ENST00000252597 SAMD8Q96LT4 415 aa11.27□□□□□ -0.61
USHBP1-201ENST00000252597 AIF1LQ9BQI0 150 aa11.27□□□□□ -0.61
USHBP1-201ENST00000252597 DPH7Q9BTV6 452 aa11.27□□□□□ -0.61
USHBP1-201ENST00000252597 TAPBPLQ9BX59 468 aa11.27□□□□□ -0.61
USHBP1-201ENST00000252597 ZCCHC2Q9C0B9 1178 aaKnown RBP11.27□□□□□ -0.61
USHBP1-201ENST00000252597 SLA2Q9H6Q3 261 aa11.27□□□□□ -0.61
USHBP1-201ENST00000252597 TNFRSF10DQ9UBN6 386 aa11.27□□□□□ -0.61
USHBP1-201ENST00000252597 IL36AQ9UHA7 158 aa11.27□□□□□ -0.61
USHBP1-201ENST00000252597 MAP1BP46821 2468 aaKnown RBP11.27□□□□□ -0.61
USHBP1-201ENST00000252597 PI15O43692 258 aa11.27□□□□□ -0.61
USHBP1-201ENST00000252597 SCO2O43819 266 aa11.27□□□□□ -0.61
USHBP1-201ENST00000252597 CXCL14O95715 111 aa11.27□□□□□ -0.61
USHBP1-201ENST00000252597 SOD2P04179 222 aa11.27□□□□□ -0.61
USHBP1-201ENST00000252597 HSD3B1P14060 373 aa11.27□□□□□ -0.61
USHBP1-201ENST00000252597 ELK1P19419 428 aa11.27□□□□□ -0.61
USHBP1-201ENST00000252597 PRPH2P23942 346 aa11.27□□□□□ -0.61
USHBP1-201ENST00000252597 HSD3B2P26439 372 aa11.27□□□□□ -0.61
USHBP1-201ENST00000252597 CHRNEQ04844 493 aa11.27□□□□□ -0.61
USHBP1-201ENST00000252597 SUZ12Q15022 739 aaKnown RBP11.27□□□□□ -0.61
USHBP1-201ENST00000252597 METTL2BQ6P1Q9 378 aaKnown RBP11.27□□□□□ -0.61
USHBP1-201ENST00000252597 PRSS45Q7RTY3 260 aa11.27□□□□□ -0.61
USHBP1-201ENST00000252597 NKAIN4Q8IVV8 208 aa11.27□□□□□ -0.61
USHBP1-201ENST00000252597 ADGRF3Q8IZF5 1079 aa11.27□□□□□ -0.61
USHBP1-201ENST00000252597 PGBD3Q8N328 593 aa11.27□□□□□ -0.61
USHBP1-201ENST00000252597 KCT2Q8NC54 265 aa11.27□□□□□ -0.61
USHBP1-201ENST00000252597 SIMC1Q8NDZ2 872 aa11.27□□□□□ -0.61
USHBP1-201ENST00000252597 OR13C5Q8NGS8 318 aa11.27□□□□□ -0.61
USHBP1-201ENST00000252597 TEX12Q9BXU0 123 aa11.27□□□□□ -0.61
USHBP1-201ENST00000252597 RSPO3Q9BXY4 272 aaPredicted RBP11.27□□□□□ -0.61
USHBP1-201ENST00000252597 IL21Q9HBE4 155 aa11.27□□□□□ -0.61
USHBP1-201ENST00000252597 NANSQ9NR45 359 aa11.27□□□□□ -0.61
USHBP1-201ENST00000252597 RBFOX1Q9NWB1 397 aaKnown RBP11.27□□□□□ -0.61
USHBP1-201ENST00000252597 RASD1Q9Y272 281 aa11.27□□□□□ -0.61
USHBP1-201ENST00000252597 A0A087WUU8 490 aa11.26□□□□□ -0.61
USHBP1-201ENST00000252597 SHISA3A0PJX4 238 aa11.26□□□□□ -0.61
USHBP1-201ENST00000252597 ZNF860A6NHJ4 632 aa11.26□□□□□ -0.61
USHBP1-201ENST00000252597 POM121CA8CG34 1229 aa11.26□□□□□ -0.61
USHBP1-201ENST00000252597 UGDHO60701 494 aa11.26□□□□□ -0.61
USHBP1-201ENST00000252597 B4GALT2O60909 372 aa11.26□□□□□ -0.61
USHBP1-201ENST00000252597 GATBO75879 557 aaKnown RBP11.26□□□□□ -0.61
USHBP1-201ENST00000252597 OR5F1O95221 314 aa11.26□□□□□ -0.61
USHBP1-201ENST00000252597 IL1AP01583 271 aa11.26□□□□□ -0.61
USHBP1-201ENST00000252597 GKN3PP0CG01 181 aa11.26□□□□□ -0.61
USHBP1-201ENST00000252597 NTSP30990 170 aa11.26□□□□□ -0.61
USHBP1-201ENST00000252597 GCGRP47871 477 aa11.26□□□□□ -0.61
USHBP1-201ENST00000252597 PLPP4Q5VZY2 271 aa11.26□□□□□ -0.61
USHBP1-201ENST00000252597 TMEM215Q68D42 235 aa11.26□□□□□ -0.61
USHBP1-201ENST00000252597 MZT2AQ6P582 158 aa11.26□□□□□ -0.61
USHBP1-201ENST00000252597 SLC36A4Q6YBV0 504 aa11.26□□□□□ -0.61
USHBP1-201ENST00000252597 PARS2Q7L3T8 475 aaKnown RBP11.26□□□□□ -0.61
USHBP1-201ENST00000252597 VN1R2Q8NFZ6 395 aa11.26□□□□□ -0.61
USHBP1-201ENST00000252597 ZCCHC10Q8TBK6 192 aa11.26□□□□□ -0.61
USHBP1-201ENST00000252597 AKAP1Q92667 903 aaKnown RBP eCLIP11.26□□□□□ -0.61
USHBP1-201ENST00000252597 MAGEB10Q96LZ2 347 aaPredicted RBP11.26□□□□□ -0.61
USHBP1-201ENST00000252597 SPATA9Q9BWV2 254 aa11.26□□□□□ -0.61
USHBP1-201ENST00000252597 TMEM38AQ9H6F2 299 aa11.26□□□□□ -0.61
USHBP1-201ENST00000252597 ING4Q9UNL4 249 aa11.26□□□□□ -0.61
USHBP1-201ENST00000252597 OR1A2Q9Y585 309 aa11.26□□□□□ -0.61
USHBP1-201ENST00000252597 THSD7BQ9C0I4 1608 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms