RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 UBE2E3Q969T4 207 aa17.82■□□□□ 0.44
SNX4-201ENST00000251775 RAD51AP1Q96B01 352 aa17.82■□□□□ 0.44
SNX4-201ENST00000251775 GPR137Q96N19 417 aa17.82■□□□□ 0.44
SNX4-201ENST00000251775 MIEF1Q9NQG6 463 aa17.82■□□□□ 0.44
SNX4-201ENST00000251775 ELF5Q9UKW6 265 aaPredicted RBP17.82■□□□□ 0.44
SNX4-201ENST00000251775 OR5K3A6NET4 321 aa17.82■□□□□ 0.44
SNX4-201ENST00000251775 RTCAO00442 366 aaKnown RBP17.82■□□□□ 0.44
SNX4-201ENST00000251775 FABP7O15540 132 aa17.82■□□□□ 0.44
SNX4-201ENST00000251775 RFPL3O75679 317 aa17.82■□□□□ 0.44
SNX4-201ENST00000251775 SLC22A5O76082 557 aa17.82■□□□□ 0.44
SNX4-201ENST00000251775 H1F0P07305 194 aaKnown RBP17.82■□□□□ 0.44
SNX4-201ENST00000251775 FGF9P31371 208 aaPredicted RBP17.82■□□□□ 0.44
SNX4-201ENST00000251775 ANKRD54Q6NXT1 300 aa17.82■□□□□ 0.44
SNX4-201ENST00000251775 FGF11Q92914 225 aa17.82■□□□□ 0.44
SNX4-201ENST00000251775 CCDC120Q96HB5 630 aa17.82■□□□□ 0.44
SNX4-201ENST00000251775 CXorf36Q9H7Y0 433 aa17.82■□□□□ 0.44
SNX4-201ENST00000251775 NUP50Q9UKX7 468 aa17.82■□□□□ 0.44
SNX4-201ENST00000251775 AUP1Q9Y679 476 aa17.82■□□□□ 0.44
SNX4-201ENST00000251775 NUMA1Q14980 2115 aa17.82■□□□□ 0.44
SNX4-201ENST00000251775 PLPP1O14494 284 aa17.81■□□□□ 0.44
SNX4-201ENST00000251775 GABRA5P31644 462 aa17.81■□□□□ 0.44
SNX4-201ENST00000251775 AVPR1BP47901 424 aa17.81■□□□□ 0.44
SNX4-201ENST00000251775 SLC25A30Q5SVS4 291 aa17.81■□□□□ 0.44
SNX4-201ENST00000251775 FAM205BPQ63HN1 556 aa17.81■□□□□ 0.44
SNX4-201ENST00000251775 CD200R1LQ6Q8B3 271 aa17.81■□□□□ 0.44
SNX4-201ENST00000251775 ADGRF3Q8IZF5 1079 aa17.81■□□□□ 0.44
SNX4-201ENST00000251775 OR4D11Q8NGI4 311 aa17.81■□□□□ 0.44
SNX4-201ENST00000251775 SLC7A13Q8TCU3 470 aa17.81■□□□□ 0.44
SNX4-201ENST00000251775 TFGQ92734 400 aaPredicted RBP17.81■□□□□ 0.44
SNX4-201ENST00000251775 BADQ92934 168 aa17.81■□□□□ 0.44
SNX4-201ENST00000251775 PPP1R16AQ96I34 528 aa17.81■□□□□ 0.44
SNX4-201ENST00000251775 WFDC6Q9BQY6 131 aa17.81■□□□□ 0.44
SNX4-201ENST00000251775 FUZQ9BT04 418 aa17.81■□□□□ 0.44
SNX4-201ENST00000251775 TM7SF3Q9NS93 570 aa17.81■□□□□ 0.44
SNX4-201ENST00000251775 LINC01553A4QN01 128 aa17.81■□□□□ 0.44
SNX4-201ENST00000251775 NCR1O76036 304 aa17.81■□□□□ 0.44
SNX4-201ENST00000251775 PDGFAP04085 211 aa17.81■□□□□ 0.44
SNX4-201ENST00000251775 KELP23276 732 aa17.81■□□□□ 0.44
SNX4-201ENST00000251775 PTBP1P26599 531 aaKnown RBP eCLIP17.81■□□□□ 0.442e-7■■■■■ 28.3
SNX4-201ENST00000251775 KLHL22Q53GT1 634 aa17.81■□□□□ 0.44
SNX4-201ENST00000251775 FAM78AQ5JUQ0 283 aa17.81■□□□□ 0.44
SNX4-201ENST00000251775 TMEM240Q5SV17 173 aa17.81■□□□□ 0.44
SNX4-201ENST00000251775 ACSM5Q6NUN0 579 aa17.81■□□□□ 0.44
SNX4-201ENST00000251775 DEF8Q6ZN54 512 aa17.81■□□□□ 0.44
SNX4-201ENST00000251775 SLC51BQ86UW2 128 aa17.81■□□□□ 0.44
SNX4-201ENST00000251775 ZFP41Q8N8Y5 198 aa17.81■□□□□ 0.44
SNX4-201ENST00000251775 LRRC20Q8TCA0 184 aa17.81■□□□□ 0.44
SNX4-201ENST00000251775 SMG7Q92540 1137 aaKnown RBP17.81■□□□□ 0.44
SNX4-201ENST00000251775 UFD1Q92890 307 aa17.81■□□□□ 0.44
SNX4-201ENST00000251775 CREB3L1Q96BA8 519 aa17.81■□□□□ 0.44
SNX4-201ENST00000251775 PDXPQ96GD0 296 aa17.81■□□□□ 0.44
SNX4-201ENST00000251775 WACQ9BTA9 647 aa17.81■□□□□ 0.44
SNX4-201ENST00000251775 ABCG4Q9H172 646 aa17.81■□□□□ 0.44
SNX4-201ENST00000251775 SLC28A3Q9HAS3 691 aa17.81■□□□□ 0.44
SNX4-201ENST00000251775 TAC3Q9UHF0 121 aa17.81■□□□□ 0.44
SNX4-201ENST00000251775 TMEM129A0AVI4 362 aa17.8■□□□□ 0.44
SNX4-201ENST00000251775 CD79BP40259 229 aa17.8■□□□□ 0.44
SNX4-201ENST00000251775 P2RY2P41231 377 aa17.8■□□□□ 0.44
SNX4-201ENST00000251775 CTBP2P56545 445 aa17.8■□□□□ 0.44
SNX4-201ENST00000251775 RPS26P62854 115 aaKnown RBP17.8■□□□□ 0.44
SNX4-201ENST00000251775 TEX261Q6UWH6 196 aa17.8■□□□□ 0.44
SNX4-201ENST00000251775 IKBIPQ70UQ0 350 aa17.8■□□□□ 0.44
SNX4-201ENST00000251775 AMZ2Q86W34 360 aa17.8■□□□□ 0.44
SNX4-201ENST00000251775 SLC30A8Q8IWU4 369 aa17.8■□□□□ 0.44
SNX4-201ENST00000251775 KRT78Q8N1N4 520 aa17.8■□□□□ 0.44
SNX4-201ENST00000251775 GHDCQ8N2G8 530 aa17.8■□□□□ 0.44
SNX4-201ENST00000251775 ANKRD53Q8N9V6 530 aa17.8■□□□□ 0.44
SNX4-201ENST00000251775 CXorf40AQ8TE69 158 aa17.8■□□□□ 0.44
SNX4-201ENST00000251775 SLC38A5Q8WUX1 472 aa17.8■□□□□ 0.44
SNX4-201ENST00000251775 COX14Q96I36 57 aa17.8■□□□□ 0.44
SNX4-201ENST00000251775 LGR4Q9BXB1 951 aa17.8■□□□□ 0.44
SNX4-201ENST00000251775 MVB12BQ9H7P6 319 aa17.8■□□□□ 0.44
SNX4-201ENST00000251775 C12orf10Q9HB07 376 aa17.8■□□□□ 0.44
SNX4-201ENST00000251775 SLAMF7Q9NQ25 335 aa17.8■□□□□ 0.44
SNX4-201ENST00000251775 CUEDC1Q9NWM3 386 aaPredicted RBP17.8■□□□□ 0.44
SNX4-201ENST00000251775 U3KQ87 197 aa17.8■□□□□ 0.44
SNX4-201ENST00000251775 TRPM6Q9BX84 2022 aa17.8■□□□□ 0.44
SNX4-201ENST00000251775 SHISA3A0PJX4 238 aa17.8■□□□□ 0.44
SNX4-201ENST00000251775 BCHEP06276 602 aa17.8■□□□□ 0.44
SNX4-201ENST00000251775 RB1P06400 928 aa17.8■□□□□ 0.44
SNX4-201ENST00000251775 INPP1P49441 399 aa17.8■□□□□ 0.44
SNX4-201ENST00000251775 EFNB1P98172 346 aa17.8■□□□□ 0.44
SNX4-201ENST00000251775 LRRC32Q14392 662 aa17.8■□□□□ 0.44
SNX4-201ENST00000251775 GINS1Q14691 196 aa17.8■□□□□ 0.44
SNX4-201ENST00000251775 ANGPT1Q15389 498 aa17.8■□□□□ 0.44
SNX4-201ENST00000251775 ZNF57Q68EA5 555 aaPredicted RBP17.8■□□□□ 0.44
SNX4-201ENST00000251775 DCUN1D3Q8IWE4 304 aa17.8■□□□□ 0.44
SNX4-201ENST00000251775 TIGD4Q8IY51 512 aa17.8■□□□□ 0.44
SNX4-201ENST00000251775 F2RL3Q96RI0 385 aa17.8■□□□□ 0.44
SNX4-201ENST00000251775 PPIL3Q9H2H8 161 aaKnown RBP17.8■□□□□ 0.44
SNX4-201ENST00000251775 ISYNA1Q9NPH2 558 aa17.8■□□□□ 0.44
SNX4-201ENST00000251775 ICKQ9UPZ9 632 aa17.8■□□□□ 0.44
SNX4-201ENST00000251775 TRDV1A0A1B0GX56 115 aa17.79■□□□□ 0.44
SNX4-201ENST00000251775 GTPBP1O00178 669 aaKnown RBP17.79■□□□□ 0.44
SNX4-201ENST00000251775 CHP2O43745 196 aa17.79■□□□□ 0.44
SNX4-201ENST00000251775 NFATC1O95644 943 aa17.79■□□□□ 0.44
SNX4-201ENST00000251775 OR12D1P0DN82 309 aa17.79■□□□□ 0.44
SNX4-201ENST00000251775 UQCRC2P22695 453 aa17.79■□□□□ 0.44
SNX4-201ENST00000251775 ALDH6A1Q02252 535 aaKnown RBP17.79■□□□□ 0.44
SNX4-201ENST00000251775 UBE3AQ05086 875 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms