RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 C1QL3Q5VWW1 255 aa22.34■■□□□ 1.17
SDF2L1-201ENST00000248958 SLC30A6Q6NXT4 461 aa22.34■■□□□ 1.17
SDF2L1-201ENST00000248958 MTFR2Q6P444 385 aa22.34■■□□□ 1.17
SDF2L1-201ENST00000248958 PACS2Q86VP3 889 aa22.34■■□□□ 1.17
SDF2L1-201ENST00000248958 SLC44A2Q8IWA5 706 aaPredicted RBP22.34■■□□□ 1.17
SDF2L1-201ENST00000248958 RIMKLAQ8IXN7 391 aa22.34■■□□□ 1.17
SDF2L1-201ENST00000248958 OR7A2PQ8NGA2 310 aa22.34■■□□□ 1.17
SDF2L1-201ENST00000248958 TMBIM1Q969X1 311 aa22.34■■□□□ 1.17
SDF2L1-201ENST00000248958 COL21A1Q96P44 957 aa22.34■■□□□ 1.17
SDF2L1-201ENST00000248958 BHLHE41Q9C0J9 482 aaPredicted RBP22.34■■□□□ 1.17
SDF2L1-201ENST00000248958 DEFB127Q9H1M4 99 aa22.34■■□□□ 1.17
SDF2L1-201ENST00000248958 METTL7AQ9H8H3 244 aa22.34■■□□□ 1.17
SDF2L1-201ENST00000248958 NTMQ9P121 344 aa22.34■■□□□ 1.17
SDF2L1-201ENST00000248958 MRTO4Q9UKD2 239 aaKnown RBP22.34■■□□□ 1.17
SDF2L1-201ENST00000248958 OR10H1Q9Y4A9 318 aa22.34■■□□□ 1.17
SDF2L1-201ENST00000248958 GTF3C1Q12789 2109 aa22.34■■□□□ 1.17
SDF2L1-201ENST00000248958 HECTD1Q9ULT8 2610 aa22.34■■□□□ 1.17
SDF2L1-201ENST00000248958 A0A1W2PRB8 838 aa22.33■■□□□ 1.17
SDF2L1-201ENST00000248958 PRRG2O14669 202 aa22.33■■□□□ 1.17
SDF2L1-201ENST00000248958 TRIM3O75382 744 aaPredicted RBP22.33■■□□□ 1.17
SDF2L1-201ENST00000248958 REM1O75628 298 aa22.33■■□□□ 1.17
SDF2L1-201ENST00000248958 IGHG3P01860 377 aa22.33■■□□□ 1.17
SDF2L1-201ENST00000248958 IL12BP29460 328 aa22.33■■□□□ 1.17
SDF2L1-201ENST00000248958 PNLIPRP2P54317 469 aa22.33■■□□□ 1.17
SDF2L1-201ENST00000248958 CORO7P57737 925 aa22.33■■□□□ 1.17
SDF2L1-201ENST00000248958 OCRLQ01968 901 aa22.33■■□□□ 1.17
SDF2L1-201ENST00000248958 SLC10A1Q14973 349 aa22.33■■□□□ 1.17
SDF2L1-201ENST00000248958 LSM12Q3MHD2 195 aaKnown RBP22.33■■□□□ 1.17
SDF2L1-201ENST00000248958 TTMPQ5BVD1 217 aa22.33■■□□□ 1.17
SDF2L1-201ENST00000248958 NPSR1Q6W5P4 371 aa22.33■■□□□ 1.17
SDF2L1-201ENST00000248958 CAMKMTQ7Z624 323 aa22.33■■□□□ 1.17
SDF2L1-201ENST00000248958 FJX1Q86VR8 437 aa22.33■■□□□ 1.17
SDF2L1-201ENST00000248958 EID3Q8N140 333 aa22.33■■□□□ 1.17
SDF2L1-201ENST00000248958 TMEM41AQ96HV5 264 aa22.33■■□□□ 1.17
SDF2L1-201ENST00000248958 RILPQ96NA2 401 aa22.33■■□□□ 1.17
SDF2L1-201ENST00000248958 LMF2Q9BU23 707 aaKnown RBP22.33■■□□□ 1.17
SDF2L1-201ENST00000248958 Q9N2J8 555 aa22.33■■□□□ 1.17
SDF2L1-201ENST00000248958 SUCOQ9UBS9 1254 aaKnown RBP22.33■■□□□ 1.17
SDF2L1-201ENST00000248958 MAST4O15021 2626 aa22.33■■□□□ 1.16
SDF2L1-201ENST00000248958 A0A1B0GTH9 108 aa22.32■■□□□ 1.16
SDF2L1-201ENST00000248958 EMC8O43402 210 aa22.32■■□□□ 1.16
SDF2L1-201ENST00000248958 TSPAN2O60636 221 aa22.32■■□□□ 1.16
SDF2L1-201ENST00000248958 UGT2B11O75310 529 aa22.32■■□□□ 1.16
SDF2L1-201ENST00000248958 PTGS2P35354 604 aa22.32■■□□□ 1.16
SDF2L1-201ENST00000248958 MAGEA5P43359 124 aa22.32■■□□□ 1.16
SDF2L1-201ENST00000248958 MASP1P48740 699 aa22.32■■□□□ 1.16
SDF2L1-201ENST00000248958 HSF1Q00613 529 aa22.32■■□□□ 1.16
SDF2L1-201ENST00000248958 VPS26BQ4G0F5 336 aa22.32■■□□□ 1.16
SDF2L1-201ENST00000248958 OGFOD2Q6N063 350 aa22.32■■□□□ 1.16
SDF2L1-201ENST00000248958 ZCCHC12Q6PEW1 402 aa22.32■■□□□ 1.16
SDF2L1-201ENST00000248958 LARP4Q71RC2 724 aaKnown RBP eCLIP22.32■■□□□ 1.162e-10■■■■■ 46.8
SDF2L1-201ENST00000248958 NUP43Q8NFH3 380 aa22.32■■□□□ 1.16
SDF2L1-201ENST00000248958 OR5P2Q8WZ92 322 aa22.32■■□□□ 1.16
SDF2L1-201ENST00000248958 ZNF75CPQ92670 426 aaPredicted RBP22.32■■□□□ 1.16
SDF2L1-201ENST00000248958 JSRP1Q96MG2 331 aaPredicted RBP22.32■■□□□ 1.16
SDF2L1-201ENST00000248958 ZNF703Q9H7S9 590 aaPredicted RBP22.32■■□□□ 1.16
SDF2L1-201ENST00000248958 LAMP1P11279 417 aa22.31■■□□□ 1.16
SDF2L1-201ENST00000248958 ELAVL4P26378 380 aaKnown RBP22.31■■□□□ 1.16
SDF2L1-201ENST00000248958 CDK9P50750 372 aaKnown RBP22.31■■□□□ 1.16
SDF2L1-201ENST00000248958 PSMD4P55036 377 aaKnown RBP22.31■■□□□ 1.16
SDF2L1-201ENST00000248958 PRR5P85299 388 aa22.31■■□□□ 1.16
SDF2L1-201ENST00000248958 C3AR1Q16581 482 aa22.31■■□□□ 1.16
SDF2L1-201ENST00000248958 CHERPQ8IWX8 916 aaKnown RBP22.31■■□□□ 1.16
SDF2L1-201ENST00000248958 KRTCAP2Q8N6L1 136 aa22.31■■□□□ 1.16
SDF2L1-201ENST00000248958 CDRT4Q8N9R6 151 aa22.31■■□□□ 1.16
SDF2L1-201ENST00000248958 PIWIL2Q8TC59 973 aaKnown RBP22.31■■□□□ 1.16
SDF2L1-201ENST00000248958 NTNG2Q96CW9 530 aa22.31■■□□□ 1.16
SDF2L1-201ENST00000248958 MS4A4EQ96PG1 132 aa22.31■■□□□ 1.16
SDF2L1-201ENST00000248958 NODALQ96S42 347 aa22.31■■□□□ 1.16
SDF2L1-201ENST00000248958 DUSP26Q9BV47 211 aa22.31■■□□□ 1.16
SDF2L1-201ENST00000248958 OSBPL11Q9BXB4 747 aa22.31■■□□□ 1.16
SDF2L1-201ENST00000248958 DPY30Q9C005 99 aa22.31■■□□□ 1.16
SDF2L1-201ENST00000248958 ACBD3Q9H3P7 528 aa22.31■■□□□ 1.16
SDF2L1-201ENST00000248958 NEUROD4Q9HD90 331 aa22.31■■□□□ 1.16
SDF2L1-201ENST00000248958 CBLCQ9ULV8 474 aa22.31■■□□□ 1.16
SDF2L1-201ENST00000248958 A0A1B0GVC2 190 aa22.3■■□□□ 1.16
SDF2L1-201ENST00000248958 OR14I1A6ND48 311 aa22.3■■□□□ 1.16
SDF2L1-201ENST00000248958 LRRC3CA6NJW4 275 aa22.3■■□□□ 1.16
SDF2L1-201ENST00000248958 CYSRT1A8MQ03 144 aa22.3■■□□□ 1.16
SDF2L1-201ENST00000248958 CCL21O00585 134 aa22.3■■□□□ 1.16
SDF2L1-201ENST00000248958 SDHDO14521 159 aa22.3■■□□□ 1.16
SDF2L1-201ENST00000248958 SUSD5O60279 629 aa22.3■■□□□ 1.16
SDF2L1-201ENST00000248958 HCN1O60741 890 aa22.3■■□□□ 1.16
SDF2L1-201ENST00000248958 NME6O75414 186 aaPredicted RBP22.3■■□□□ 1.16
SDF2L1-201ENST00000248958 DIO3P55073 304 aa22.3■■□□□ 1.16
SDF2L1-201ENST00000248958 DECR1Q16698 335 aa22.3■■□□□ 1.16
SDF2L1-201ENST00000248958 TRILQ7L0X0 811 aa22.3■■□□□ 1.16
SDF2L1-201ENST00000248958 SPATA19Q7Z5L4 167 aa22.3■■□□□ 1.16
SDF2L1-201ENST00000248958 WDR75Q8IWA0 830 aaKnown RBP22.3■■□□□ 1.16
SDF2L1-201ENST00000248958 PSMA8Q8TAA3 256 aa22.3■■□□□ 1.16
SDF2L1-201ENST00000248958 FAM57AQ8TBR7 257 aa22.3■■□□□ 1.16
SDF2L1-201ENST00000248958 HOXB13Q92826 284 aaPredicted RBP22.3■■□□□ 1.16
SDF2L1-201ENST00000248958 DTNBP1Q96EV8 351 aa22.3■■□□□ 1.16
SDF2L1-201ENST00000248958 PSMG3-AS1Q96PY0 264 aa22.3■■□□□ 1.16
SDF2L1-201ENST00000248958 ADOQ96SZ5 270 aa22.3■■□□□ 1.16
SDF2L1-201ENST00000248958 LDAHQ9H6V9 325 aa22.3■■□□□ 1.16
SDF2L1-201ENST00000248958 ACKR4Q9NPB9 350 aa22.3■■□□□ 1.16
SDF2L1-201ENST00000248958 KLRF1Q9NZS2 232 aa22.3■■□□□ 1.16
SDF2L1-201ENST00000248958 PRAMEF25A6NGN4 478 aa22.29■■□□□ 1.16
SDF2L1-201ENST00000248958 PDE9AO76083 593 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms