RNA–Protein interactions for RNA: ENST00000244360.6

RNF39-201, Transcript of ring finger protein 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF39, Length 2,206 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39-201ENST00000244360 OR8J1Q8NGP2 316 aa20.57■□□□□ 0.88
RNF39-201ENST00000244360 OR9Q1Q8NGQ5 310 aa20.57■□□□□ 0.88
RNF39-201ENST00000244360 IL4I1Q96RQ9 567 aa20.57■□□□□ 0.88
RNF39-201ENST00000244360 ASPNQ9BXN1 380 aa20.57■□□□□ 0.88
RNF39-201ENST00000244360 SLC38A1Q9H2H9 487 aa20.57■□□□□ 0.88
RNF39-201ENST00000244360 SRMSQ9H3Y6 488 aa20.57■□□□□ 0.88
RNF39-201ENST00000244360 SLC28A3Q9HAS3 691 aa20.57■□□□□ 0.88
RNF39-201ENST00000244360 ZNF780BQ9Y6R6 833 aa20.57■□□□□ 0.88
RNF39-201ENST00000244360 GIMAP1-GIMAP5A0A087WTJ2 511 aa20.56■□□□□ 0.88
RNF39-201ENST00000244360 GSTT2P0CG29 244 aa20.56■□□□□ 0.88
RNF39-201ENST00000244360 GSTT2BP0CG30 244 aa20.56■□□□□ 0.88
RNF39-201ENST00000244360 KIR2DS3Q14952 304 aa20.56■□□□□ 0.88
RNF39-201ENST00000244360 RAB30Q15771 203 aa20.56■□□□□ 0.88
RNF39-201ENST00000244360 OCLNQ16625 522 aa20.56■□□□□ 0.88
RNF39-201ENST00000244360 ZER1Q7Z7L7 766 aa20.56■□□□□ 0.88
RNF39-201ENST00000244360 NUP43Q8NFH3 380 aa20.56■□□□□ 0.88
RNF39-201ENST00000244360 TM4SF19Q96DZ7 209 aa20.56■□□□□ 0.88
RNF39-201ENST00000244360 GIMAP5Q96F15 307 aa20.56■□□□□ 0.88
RNF39-201ENST00000244360 MRGPRX1Q96LB2 322 aa20.56■□□□□ 0.88
RNF39-201ENST00000244360 HOXD1Q9GZZ0 328 aa20.56■□□□□ 0.88
RNF39-201ENST00000244360 NTMQ9P121 344 aa20.56■□□□□ 0.88
RNF39-201ENST00000244360 STUB1Q9UNE7 303 aa20.56■□□□□ 0.88
RNF39-201ENST00000244360 LIPT1Q9Y234 373 aa20.56■□□□□ 0.88
RNF39-201ENST00000244360 H3BN98 237 aa20.55■□□□□ 0.88
RNF39-201ENST00000244360 TNFRSF10CO14798 259 aa20.55■□□□□ 0.88
RNF39-201ENST00000244360 TNFSF14O43557 240 aa20.55■□□□□ 0.88
RNF39-201ENST00000244360 MMP11P24347 488 aa20.55■□□□□ 0.88
RNF39-201ENST00000244360 C1DQ13901 141 aaKnown RBP20.55■□□□□ 0.88
RNF39-201ENST00000244360 SPHARQ15513 63 aa20.55■□□□□ 0.88
RNF39-201ENST00000244360 GPAT3Q53EU6 434 aa20.55■□□□□ 0.88
RNF39-201ENST00000244360 C1orf94Q6P1W5 598 aa20.55■□□□□ 0.88
RNF39-201ENST00000244360 CCL4L1Q8NHW4 92 aa20.55■□□□□ 0.88
RNF39-201ENST00000244360 ARHGDIGQ99819 225 aa20.55■□□□□ 0.88
RNF39-201ENST00000244360 MCOLN1Q9GZU1 580 aa20.55■□□□□ 0.88
RNF39-201ENST00000244360 GRIP1Q9Y3R0 1128 aa20.55■□□□□ 0.88
RNF39-201ENST00000244360 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.55■□□□□ 0.88
RNF39-201ENST00000244360 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.55■□□□□ 0.88
RNF39-201ENST00000244360 CSO75390 466 aaKnown RBP20.55■□□□□ 0.88
RNF39-201ENST00000244360 ZNF888P0CJ79 500 aaPredicted RBP20.55■□□□□ 0.88
RNF39-201ENST00000244360 BUD31P41223 144 aaPredicted RBP20.55■□□□□ 0.88
RNF39-201ENST00000244360 RORCP51449 518 aa20.55■□□□□ 0.88
RNF39-201ENST00000244360 COPZ1P61923 177 aa20.55■□□□□ 0.88
RNF39-201ENST00000244360 DLX2Q07687 328 aaPredicted RBP20.55■□□□□ 0.88
RNF39-201ENST00000244360 NDUFA5Q16718 116 aa20.55■□□□□ 0.88
RNF39-201ENST00000244360 MFSD4BQ5TF39 518 aa20.55■□□□□ 0.88
RNF39-201ENST00000244360 WDR53Q7Z5U6 358 aaPredicted RBP20.55■□□□□ 0.88
RNF39-201ENST00000244360 NR4A3Q92570 626 aa20.55■□□□□ 0.88
RNF39-201ENST00000244360 TSACCQ96A04 125 aaPredicted RBP20.55■□□□□ 0.88
RNF39-201ENST00000244360 FCRL4Q96PJ5 515 aa20.55■□□□□ 0.88
RNF39-201ENST00000244360 SDHCQ99643 169 aaPredicted RBP20.55■□□□□ 0.88
RNF39-201ENST00000244360 KCNS3Q9BQ31 491 aa20.55■□□□□ 0.88
RNF39-201ENST00000244360 CNPPD1Q9BV87 410 aa20.55■□□□□ 0.88
RNF39-201ENST00000244360 EXOSC4Q9NPD3 245 aaKnown RBP20.55■□□□□ 0.88
RNF39-201ENST00000244360 CD93Q9NPY3 652 aa20.55■□□□□ 0.88
RNF39-201ENST00000244360 CALML5Q9NZT1 146 aa20.55■□□□□ 0.88
RNF39-201ENST00000244360 SMIM10L1P0DMW3 83 aa20.54■□□□□ 0.88
RNF39-201ENST00000244360 ACTR1BP42025 376 aa20.54■□□□□ 0.88
RNF39-201ENST00000244360 ACTR1AP61163 376 aa20.54■□□□□ 0.88
RNF39-201ENST00000244360 TNFRSF17Q02223 184 aa20.54■□□□□ 0.88
RNF39-201ENST00000244360 MLLT11Q13015 90 aaPredicted RBP20.54■□□□□ 0.88
RNF39-201ENST00000244360 ENTPD8Q5MY95 495 aa20.54■□□□□ 0.88
RNF39-201ENST00000244360 SLC25A30Q5SVS4 291 aa20.54■□□□□ 0.88
RNF39-201ENST00000244360 AGAP6Q5VW22 663 aa20.54■□□□□ 0.88
RNF39-201ENST00000244360 FBXO42Q6P3S6 717 aa20.54■□□□□ 0.88
RNF39-201ENST00000244360 HMGN2P46Q86SG4 172 aa20.54■□□□□ 0.88
RNF39-201ENST00000244360 SLC34A3Q8N130 599 aa20.54■□□□□ 0.88
RNF39-201ENST00000244360 PROKR2Q8NFJ6 384 aa20.54■□□□□ 0.88
RNF39-201ENST00000244360 SMIM10Q96HG1 83 aa20.54■□□□□ 0.88
RNF39-201ENST00000244360 SLC6A18Q96N87 628 aa20.54■□□□□ 0.88
RNF39-201ENST00000244360 WDFY2Q96P53 400 aa20.54■□□□□ 0.88
RNF39-201ENST00000244360 AGAP4Q96P64 663 aa20.54■□□□□ 0.88
RNF39-201ENST00000244360 OR2A14Q96R47 310 aa20.54■□□□□ 0.88
RNF39-201ENST00000244360 NDUFB11Q9NX14 153 aa20.54■□□□□ 0.88
RNF39-201ENST00000244360 CAB39Q9Y376 341 aaPredicted RBP20.54■□□□□ 0.88
RNF39-201ENST00000244360 COL4A2P08572 1712 aa20.54■□□□□ 0.88
RNF39-201ENST00000244360 ZNF670-ZNF695F2Z2N8 137 aa20.54■□□□□ 0.88
RNF39-201ENST00000244360 NARSO43776 548 aaKnown RBP20.54■□□□□ 0.88
RNF39-201ENST00000244360 HNRNPA2B1P22626 353 aaKnown RBP20.54■□□□□ 0.88
RNF39-201ENST00000244360 TNFSF8P32971 234 aa20.54■□□□□ 0.88
RNF39-201ENST00000244360 SNRPNP63162 240 aaKnown RBP20.54■□□□□ 0.88
RNF39-201ENST00000244360 ZNF544Q6NX49 715 aa20.54■□□□□ 0.88
RNF39-201ENST00000244360 PRR23CQ6ZRP0 262 aa20.54■□□□□ 0.88
RNF39-201ENST00000244360 RD3Q7Z3Z2 195 aa20.54■□□□□ 0.88
RNF39-201ENST00000244360 NANOGP1Q8N7R0 232 aa20.54■□□□□ 0.88
RNF39-201ENST00000244360 IL17RDQ8NFM7 739 aa20.54■□□□□ 0.88
RNF39-201ENST00000244360 OR2A5Q96R48 311 aa20.54■□□□□ 0.88
RNF39-201ENST00000244360 POLDIP3Q9BY77 421 aaKnown RBP20.54■□□□□ 0.88
RNF39-201ENST00000244360 ACTRT3Q9BYD9 372 aa20.54■□□□□ 0.88
RNF39-201ENST00000244360 TMEM168Q9H0V1 697 aa20.54■□□□□ 0.88
RNF39-201ENST00000244360 DNAJC27Q9NZQ0 273 aa20.54■□□□□ 0.88
RNF39-201ENST00000244360 KCMF1Q9P0J7 381 aa20.54■□□□□ 0.88
RNF39-201ENST00000244360 POU2F3Q9UKI9 436 aa20.54■□□□□ 0.88
RNF39-201ENST00000244360 CTDSP2O14595 271 aa20.53■□□□□ 0.88
RNF39-201ENST00000244360 SLC35G6P0C7Q6 338 aa20.53■□□□□ 0.88
RNF39-201ENST00000244360 ACSL1P33121 698 aa20.53■□□□□ 0.88
RNF39-201ENST00000244360 MRPS21P82921 87 aaKnown RBP20.53■□□□□ 0.88
RNF39-201ENST00000244360 ZNF91Q05481 1191 aa20.53■□□□□ 0.88
RNF39-201ENST00000244360 RUNX1T1Q06455 604 aa20.53■□□□□ 0.88
RNF39-201ENST00000244360 DOC2BQ14184 412 aa20.53■□□□□ 0.88
RNF39-201ENST00000244360 LTB4RQ15722 352 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms