RNA–Protein interactions for RNA: ENST00000244020.4

SRSF6-201, Transcript of serine and arginine rich splicing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF6, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-201ENST00000244020 NT5DC2Q9H857 520 aa8.76□□□□□ -1.01
SRSF6-201ENST00000244020 RC3H2Q9HBD1 1191 aaKnown RBP8.76□□□□□ -1.01
SRSF6-201ENST00000244020 SPATA6Q9NWH7 488 aaPredicted RBP8.76□□□□□ -1.01
SRSF6-201ENST00000244020 TVP23AA6NH52 213 aa8.76□□□□□ -1.01
SRSF6-201ENST00000244020 NPIPB15A6NHN6 443 aaPredicted RBP8.76□□□□□ -1.01
SRSF6-201ENST00000244020 FZD6O60353 706 aa8.76□□□□□ -1.01
SRSF6-201ENST00000244020 SLC19A2O60779 497 aa8.76□□□□□ -1.01
SRSF6-201ENST00000244020 ZNF254O75437 659 aa8.76□□□□□ -1.01
SRSF6-201ENST00000244020 APOC1P02654 83 aa8.76□□□□□ -1.01
SRSF6-201ENST00000244020 DRD5P21918 477 aa8.76□□□□□ -1.01
SRSF6-201ENST00000244020 ELAVL4P26378 380 aaKnown RBP8.76□□□□□ -1.01
SRSF6-201ENST00000244020 GABRA5P31644 462 aa8.76□□□□□ -1.01
SRSF6-201ENST00000244020 GIPRP48546 466 aa8.76□□□□□ -1.01
SRSF6-201ENST00000244020 SLC3A1Q07837 685 aa8.76□□□□□ -1.01
SRSF6-201ENST00000244020 POU4F2Q12837 409 aa8.76□□□□□ -1.01
SRSF6-201ENST00000244020 MAP2K5Q13163 448 aa8.76□□□□□ -1.01
SRSF6-201ENST00000244020 GPR176Q14439 515 aa8.76□□□□□ -1.01
SRSF6-201ENST00000244020 RFLNAQ6ZTI6 216 aa8.76□□□□□ -1.01
SRSF6-201ENST00000244020 HMGN2P46Q86SG4 172 aa8.76□□□□□ -1.01
SRSF6-201ENST00000244020 RBM45Q8IUH3 476 aaKnown RBP8.76□□□□□ -1.01
SRSF6-201ENST00000244020 PDZD9Q8IXQ8 264 aa8.76□□□□□ -1.01
SRSF6-201ENST00000244020 ARMC10Q8N2F6 343 aa8.76□□□□□ -1.01
SRSF6-201ENST00000244020 SAMD12Q8N8I0 201 aa8.76□□□□□ -1.01
SRSF6-201ENST00000244020 BEST4Q8NFU0 473 aa8.76□□□□□ -1.01
SRSF6-201ENST00000244020 OR7G2Q8NG99 324 aa8.76□□□□□ -1.01
SRSF6-201ENST00000244020 C1orf216Q8TAB5 229 aa8.76□□□□□ -1.01
SRSF6-201ENST00000244020 XAGE5Q8WWM1 108 aa8.76□□□□□ -1.01
SRSF6-201ENST00000244020 MRPS31Q92665 395 aaKnown RBP8.76□□□□□ -1.01
SRSF6-201ENST00000244020 SPNS1Q9H2V7 528 aa8.76□□□□□ -1.01
SRSF6-201ENST00000244020 TMEM38AQ9H6F2 299 aa8.76□□□□□ -1.01
SRSF6-201ENST00000244020 DYRK1BQ9Y463 629 aa8.76□□□□□ -1.01
SRSF6-201ENST00000244020 CCDC88CQ9P219 2028 aa8.76□□□□□ -1.01
SRSF6-201ENST00000244020 BRWD3Q6RI45 1802 aa8.76□□□□□ -1.01
SRSF6-201ENST00000244020 WDR90Q96KV7 1748 aa8.75□□□□□ -1.01
SRSF6-201ENST00000244020 TNS1Q9HBL0 1735 aaKnown RBP8.75□□□□□ -1.01
SRSF6-201ENST00000244020 TEX13CA0A0J9YWL9 993 aa8.75□□□□□ -1.01
SRSF6-201ENST00000244020 MYADML2A6NDP7 307 aa8.75□□□□□ -1.01
SRSF6-201ENST00000244020 F5H0A9 414 aaPredicted RBP8.75□□□□□ -1.01
SRSF6-201ENST00000244020 B4GALT3O60512 393 aa8.75□□□□□ -1.01
SRSF6-201ENST00000244020 PQBP1O60828 265 aaKnown RBP8.75□□□□□ -1.01
SRSF6-201ENST00000244020 GPR37L1O60883 481 aa8.75□□□□□ -1.01
SRSF6-201ENST00000244020 RASGRP1O95267 797 aa8.75□□□□□ -1.01
SRSF6-201ENST00000244020 CELF2O95319 508 aaKnown RBP8.75□□□□□ -1.01
SRSF6-201ENST00000244020 ACADMP11310 421 aa8.75□□□□□ -1.01
SRSF6-201ENST00000244020 HSD3B1P14060 373 aa8.75□□□□□ -1.01
SRSF6-201ENST00000244020 HSD3B2P26439 372 aa8.75□□□□□ -1.01
SRSF6-201ENST00000244020 BUD31P41223 144 aaPredicted RBP8.75□□□□□ -1.01
SRSF6-201ENST00000244020 SMAD3P84022 425 aaKnown RBP8.75□□□□□ -1.01
SRSF6-201ENST00000244020 HSPB3Q12988 150 aa8.75□□□□□ -1.01
SRSF6-201ENST00000244020 ZNF425Q6IV72 752 aa8.75□□□□□ -1.01
SRSF6-201ENST00000244020 COMMD6Q7Z4G1 85 aa8.75□□□□□ -1.01
SRSF6-201ENST00000244020 WDR53Q7Z5U6 358 aaPredicted RBP8.75□□□□□ -1.01
SRSF6-201ENST00000244020 WDR20Q8TBZ3 569 aa8.75□□□□□ -1.01
SRSF6-201ENST00000244020 MRPL48Q96GC5 212 aaKnown RBP8.75□□□□□ -1.01
SRSF6-201ENST00000244020 ZC3HAV1LQ96H79 300 aaKnown RBP8.75□□□□□ -1.01
SRSF6-201ENST00000244020 ZNF582Q96NG8 517 aaPredicted RBP8.75□□□□□ -1.01
SRSF6-201ENST00000244020 ZNF416Q9BWM5 594 aa8.75□□□□□ -1.01
SRSF6-201ENST00000244020 TMEM185BQ9H7F4 350 aa8.75□□□□□ -1.01
SRSF6-201ENST00000244020 PPP1R3EQ9H7J1 279 aa8.75□□□□□ -1.01
SRSF6-201ENST00000244020 ELL3Q9HB65 397 aaPredicted RBP8.75□□□□□ -1.01
SRSF6-201ENST00000244020 ZFR2Q9UPR6 939 aaKnown RBP8.75□□□□□ -1.01
SRSF6-201ENST00000244020 CA5BQ9Y2D0 317 aa8.75□□□□□ -1.01
SRSF6-201ENST00000244020 CDH10Q9Y6N8 788 aa8.75□□□□□ -1.01
SRSF6-201ENST00000244020 MYO16Q9Y6X6 1858 aa8.75□□□□□ -1.01
SRSF6-201ENST00000244020 F8W036 122 aa8.75□□□□□ -1.01
SRSF6-201ENST00000244020 CHST10O43529 356 aa8.75□□□□□ -1.01
SRSF6-201ENST00000244020 PIP5K1CO60331 668 aa8.75□□□□□ -1.01
SRSF6-201ENST00000244020 UGDHO60701 494 aa8.75□□□□□ -1.01
SRSF6-201ENST00000244020 HLA-DQA2P01906 255 aa8.75□□□□□ -1.01
SRSF6-201ENST00000244020 ARAFP10398 606 aa8.75□□□□□ -1.01
SRSF6-201ENST00000244020 ACSL1P33121 698 aa8.75□□□□□ -1.01
SRSF6-201ENST00000244020 BDKRB1P46663 353 aa8.75□□□□□ -1.01
SRSF6-201ENST00000244020 BLOC1S1P78537 153 aa8.75□□□□□ -1.01
SRSF6-201ENST00000244020 MEF2AQ02078 507 aaPredicted RBP8.75□□□□□ -1.01
SRSF6-201ENST00000244020 TAF13Q15543 124 aa8.75□□□□□ -1.01
SRSF6-201ENST00000244020 COL28A1Q2UY09 1125 aa8.75□□□□□ -1.01
SRSF6-201ENST00000244020 HES5Q5TA89 166 aa8.75□□□□□ -1.01
SRSF6-201ENST00000244020 GRHL2Q6ISB3 625 aa8.75□□□□□ -1.01
SRSF6-201ENST00000244020 WDSUB1Q8N9V3 476 aa8.75□□□□□ -1.01
SRSF6-201ENST00000244020 TCTEX1D2Q8WW35 142 aa8.75□□□□□ -1.01
SRSF6-201ENST00000244020 AUTS2Q8WXX7 1259 aa8.75□□□□□ -1.01
SRSF6-201ENST00000244020 MED18Q9BUE0 208 aa8.75□□□□□ -1.01
SRSF6-201ENST00000244020 OR51J1Q9H342 316 aa8.75□□□□□ -1.01
SRSF6-201ENST00000244020 WASH6PQ9NQA3 447 aa8.75□□□□□ -1.01
SRSF6-201ENST00000244020 OR10H1Q9Y4A9 318 aa8.75□□□□□ -1.01
SRSF6-201ENST00000244020 PRRG1O14668 218 aa8.75□□□□□ -1.01
SRSF6-201ENST00000244020 SYN3O14994 580 aa8.75□□□□□ -1.01
SRSF6-201ENST00000244020 CHP2O43745 196 aa8.75□□□□□ -1.01
SRSF6-201ENST00000244020 SPDEFO95238 335 aa8.75□□□□□ -1.01
SRSF6-201ENST00000244020 CD160O95971 181 aa8.75□□□□□ -1.01
SRSF6-201ENST00000244020 PAHP00439 452 aa8.75□□□□□ -1.01
SRSF6-201ENST00000244020 EPHX1P07099 455 aa8.75□□□□□ -1.01
SRSF6-201ENST00000244020 NR2F1P10589 423 aa8.75□□□□□ -1.01
SRSF6-201ENST00000244020 ETV3P41162 512 aa8.75□□□□□ -1.01
SRSF6-201ENST00000244020 RGS19P49795 217 aa8.75□□□□□ -1.01
SRSF6-201ENST00000244020 RAE1P78406 368 aaKnown RBP8.75□□□□□ -1.01
SRSF6-201ENST00000244020 SP140Q13342 867 aa8.75□□□□□ -1.01
SRSF6-201ENST00000244020 PUM1Q14671 1186 aaKnown RBP eCLIP8.75□□□□□ -1.013e-8■■□□□ 13.5
SRSF6-201ENST00000244020 ZNF791Q3KP31 576 aaPredicted RBP8.75□□□□□ -1.01
SRSF6-201ENST00000244020 RAET1GQ6H3X3 334 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms