RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 IZUMO2Q6UXV1 221 aa17.28■□□□□ 0.36
SNX17-201ENST00000233575 ARMC8Q8IUR7 673 aa17.28■□□□□ 0.36
SNX17-201ENST00000233575 OR4N2Q8NGD1 307 aa17.28■□□□□ 0.36
SNX17-201ENST00000233575 BBS10Q8TAM1 723 aa17.28■□□□□ 0.36
SNX17-201ENST00000233575 EME1Q96AY2 570 aa17.28■□□□□ 0.36
SNX17-201ENST00000233575 VPS50Q96JG6 964 aa17.28■□□□□ 0.36
SNX17-201ENST00000233575 TRNT1Q96Q11 434 aaKnown RBP17.28■□□□□ 0.36
SNX17-201ENST00000233575 WFDC6Q9BQY6 131 aa17.28■□□□□ 0.36
SNX17-201ENST00000233575 KLHL4Q9C0H6 718 aa17.28■□□□□ 0.36
SNX17-201ENST00000233575 DUSP22Q9NRW4 184 aa17.28■□□□□ 0.36
SNX17-201ENST00000233575 MKLN1Q9UL63 735 aa17.28■□□□□ 0.36
SNX17-201ENST00000233575 LIPT1Q9Y234 373 aa17.28■□□□□ 0.36
SNX17-201ENST00000233575 SH3GLB1Q9Y371 365 aa17.28■□□□□ 0.36
SNX17-201ENST00000233575 CLCA3PQ9Y6N3 262 aa17.28■□□□□ 0.36
SNX17-201ENST00000233575 RIF1Q5UIP0 2472 aaKnown RBP17.28■□□□□ 0.36
SNX17-201ENST00000233575 NINQ8N4C6 2090 aa17.27■□□□□ 0.36
SNX17-201ENST00000233575 SPAARA0A1B0GVQ0 90 aa17.27■□□□□ 0.36
SNX17-201ENST00000233575 PDLIM1O00151 329 aa17.27■□□□□ 0.36
SNX17-201ENST00000233575 PRAMEF2O60811 474 aa17.27■□□□□ 0.36
SNX17-201ENST00000233575 DDAH2O95865 285 aa17.27■□□□□ 0.36
SNX17-201ENST00000233575 FABP3P05413 133 aa17.27■□□□□ 0.36
SNX17-201ENST00000233575 ELOAQ14241 798 aaKnown RBP17.27■□□□□ 0.36
SNX17-201ENST00000233575 ELAVL1Q15717 326 aaKnown RBP17.27■□□□□ 0.36
SNX17-201ENST00000233575 ARHGAP11BQ3KRB8 267 aa17.27■□□□□ 0.36
SNX17-201ENST00000233575 MRPL14Q6P1L8 145 aaKnown RBP17.27■□□□□ 0.36
SNX17-201ENST00000233575 FIGNL1Q6PIW4 674 aa17.27■□□□□ 0.36
SNX17-201ENST00000233575 NPSR1Q6W5P4 371 aa17.27■□□□□ 0.36
SNX17-201ENST00000233575 FRRS1Q6ZNA5 592 aa17.27■□□□□ 0.36
SNX17-201ENST00000233575 GLRX5Q86SX6 157 aa17.27■□□□□ 0.36
SNX17-201ENST00000233575 COX18Q8N8Q8 333 aa17.27■□□□□ 0.36
SNX17-201ENST00000233575 GALNT6Q8NCL4 622 aa17.27■□□□□ 0.36
SNX17-201ENST00000233575 MR1Q95460 341 aa17.27■□□□□ 0.36
SNX17-201ENST00000233575 ZNF607Q96SK3 696 aa17.27■□□□□ 0.36
SNX17-201ENST00000233575 STACQ99469 402 aa17.27■□□□□ 0.36
SNX17-201ENST00000233575 SDF2Q99470 211 aa17.27■□□□□ 0.36
SNX17-201ENST00000233575 SLC29A1Q99808 456 aa17.27■□□□□ 0.36
SNX17-201ENST00000233575 LMF2Q9BU23 707 aaKnown RBP17.27■□□□□ 0.36
SNX17-201ENST00000233575 ITPAQ9BY32 194 aa17.27■□□□□ 0.36
SNX17-201ENST00000233575 COQ10BQ9H8M1 238 aa17.27■□□□□ 0.36
SNX17-201ENST00000233575 C14orf105Q9NVL8 296 aa17.27■□□□□ 0.36
SNX17-201ENST00000233575 VNN3Q9NY84 501 aa17.27■□□□□ 0.36
SNX17-201ENST00000233575 SEC14L3Q9UDX4 400 aa17.27■□□□□ 0.36
SNX17-201ENST00000233575 OAZ3Q9UMX2 235 aa17.27■□□□□ 0.36
SNX17-201ENST00000233575 ZNF451Q9Y4E5 1061 aa17.27■□□□□ 0.36
SNX17-201ENST00000233575 DSPPQ9NZW4 1301 aa17.27■□□□□ 0.35
SNX17-201ENST00000233575 A0A0G2JPF8 293 aa17.26■□□□□ 0.35
SNX17-201ENST00000233575 HNRNPCL2B2RXH8 293 aa17.26■□□□□ 0.35
SNX17-201ENST00000233575 HNRNPCL3B7ZW38 293 aa17.26■□□□□ 0.35
SNX17-201ENST00000233575 PDE9AO76083 593 aa17.26■□□□□ 0.35
SNX17-201ENST00000233575 NKX2-2O95096 273 aa17.26■□□□□ 0.35
SNX17-201ENST00000233575 IFNA14P01570 189 aa17.26■□□□□ 0.35
SNX17-201ENST00000233575 HEXBP07686 556 aa17.26■□□□□ 0.35
SNX17-201ENST00000233575 HNRNPCL4P0DMR1 293 aa17.26■□□□□ 0.35
SNX17-201ENST00000233575 AGXTP21549 392 aa17.26■□□□□ 0.35
SNX17-201ENST00000233575 AQP4P55087 323 aa17.26■□□□□ 0.35
SNX17-201ENST00000233575 PUM1Q14671 1186 aaKnown RBP eCLIP17.26■□□□□ 0.35
SNX17-201ENST00000233575 DCST2Q5T1A1 773 aa17.26■□□□□ 0.35
SNX17-201ENST00000233575 DCAF12Q5T6F0 453 aa17.26■□□□□ 0.35
SNX17-201ENST00000233575 TYW3Q6IPR3 259 aaKnown RBP17.26■□□□□ 0.35
SNX17-201ENST00000233575 SLC2A12Q8TD20 617 aa17.26■□□□□ 0.35
SNX17-201ENST00000233575 ZNF721Q8TF20 911 aa17.26■□□□□ 0.35
SNX17-201ENST00000233575 LIN37Q96GY3 246 aaPredicted RBP17.26■□□□□ 0.35
SNX17-201ENST00000233575 FBXL20Q96IG2 436 aa17.26■□□□□ 0.35
SNX17-201ENST00000233575 IRF2BPLQ9H1B7 796 aa17.26■□□□□ 0.35
SNX17-201ENST00000233575 YY1AP1Q9H869 796 aa17.26■□□□□ 0.35
SNX17-201ENST00000233575 DTNAQ9Y4J8 743 aa17.26■□□□□ 0.35
SNX17-201ENST00000233575 MAGED1Q9Y5V3 778 aaPredicted RBP17.26■□□□□ 0.35
SNX17-201ENST00000233575 CENPVL1A0A0U1RR11 272 aa17.26■□□□□ 0.35
SNX17-201ENST00000233575 DEAF1O75398 565 aaPredicted RBP17.26■□□□□ 0.35
SNX17-201ENST00000233575 PRSS23O95084 383 aa17.26■□□□□ 0.35
SNX17-201ENST00000233575 EPPINO95925 133 aa17.26■□□□□ 0.35
SNX17-201ENST00000233575 AGR2O95994 175 aa17.26■□□□□ 0.35
SNX17-201ENST00000233575 IGKV3-11P04433 115 aa17.26■□□□□ 0.35
SNX17-201ENST00000233575 FESP07332 822 aa17.26■□□□□ 0.35
SNX17-201ENST00000233575 ETS2P15036 469 aa17.26■□□□□ 0.35
SNX17-201ENST00000233575 SLC37A1P57057 533 aa17.26■□□□□ 0.35
SNX17-201ENST00000233575 GNA13Q14344 377 aa17.26■□□□□ 0.35
SNX17-201ENST00000233575 IFI44LQ53G44 452 aa17.26■□□□□ 0.35
SNX17-201ENST00000233575 FAM198BQ6UWH4 519 aa17.26■□□□□ 0.35
SNX17-201ENST00000233575 ZAR1Q86SH2 424 aa17.26■□□□□ 0.35
SNX17-201ENST00000233575 GALNT4Q8N4A0 578 aa17.26■□□□□ 0.35
SNX17-201ENST00000233575 APOBEC4Q8WW27 367 aaKnown RBP17.26■□□□□ 0.35
SNX17-201ENST00000233575 LZICQ8WZA0 190 aa17.26■□□□□ 0.35
SNX17-201ENST00000233575 POP5Q969H6 163 aaKnown RBP17.26■□□□□ 0.35
SNX17-201ENST00000233575 RMND5BQ96G75 393 aaPredicted RBP17.26■□□□□ 0.35
SNX17-201ENST00000233575 ZNF578Q96N58 590 aaPredicted RBP17.26■□□□□ 0.35
SNX17-201ENST00000233575 LRFN5Q96NI6 719 aa17.26■□□□□ 0.35
SNX17-201ENST00000233575 NUDT9Q9BW91 350 aa17.26■□□□□ 0.35
SNX17-201ENST00000233575 SLC26A1Q9H2B4 701 aa17.26■□□□□ 0.35
SNX17-201ENST00000233575 DNAJB9Q9UBS3 223 aa17.26■□□□□ 0.35
SNX17-201ENST00000233575 C3orf18Q9UK00 162 aa17.26■□□□□ 0.35
SNX17-201ENST00000233575 PCDHGA8Q9Y5G5 932 aa17.26■□□□□ 0.35
SNX17-201ENST00000233575 SOCS2O14508 198 aa17.25■□□□□ 0.35
SNX17-201ENST00000233575 ACOX3O15254 700 aa17.25■□□□□ 0.35
SNX17-201ENST00000233575 SERPINB7O75635 380 aa17.25■□□□□ 0.35
SNX17-201ENST00000233575 KLK3P07288 261 aaPredicted RBP17.25■□□□□ 0.35
SNX17-201ENST00000233575 JMJD7P0C870 316 aa17.25■□□□□ 0.35
SNX17-201ENST00000233575 CT45A8P0DMV1 189 aa17.25■□□□□ 0.35
SNX17-201ENST00000233575 CT45A9P0DMV2 189 aa17.25■□□□□ 0.35
SNX17-201ENST00000233575 ZNF26P17031 533 aaPredicted RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms