RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 SPDYE7PQ495Y7 208 aa10.4□□□□□ -0.74
SF3B6-201ENST00000233468 SLC9B1Q4ZJI4 515 aa10.4□□□□□ -0.74
SF3B6-201ENST00000233468 PDCD4Q53EL6 469 aaKnown RBP10.4□□□□□ -0.74
SF3B6-201ENST00000233468 ZNF385BQ569K4 471 aa10.4□□□□□ -0.74
SF3B6-201ENST00000233468 ZNF468Q5VIY5 522 aaPredicted RBP10.4□□□□□ -0.74
SF3B6-201ENST00000233468 SLC22A10Q63ZE4 541 aa10.4□□□□□ -0.74
SF3B6-201ENST00000233468 ZNF787Q6DD87 383 aa10.4□□□□□ -0.74
SF3B6-201ENST00000233468 C16orf47Q6ZP98 133 aaPredicted RBP10.4□□□□□ -0.74
SF3B6-201ENST00000233468 GK5Q6ZS86 529 aa10.4□□□□□ -0.74
SF3B6-201ENST00000233468 FAM47EQ6ZV65 393 aa10.4□□□□□ -0.74
SF3B6-201ENST00000233468 ZNF551Q7Z340 670 aaPredicted RBP10.4□□□□□ -0.74
SF3B6-201ENST00000233468 SZRD1Q7Z422 152 aa10.4□□□□□ -0.74
SF3B6-201ENST00000233468 GALNTL5Q7Z4T8 443 aa10.4□□□□□ -0.74
SF3B6-201ENST00000233468 SLC34A3Q8N130 599 aa10.4□□□□□ -0.74
SF3B6-201ENST00000233468 KRTCAP2Q8N6L1 136 aa10.4□□□□□ -0.74
SF3B6-201ENST00000233468 CDRT4Q8N9R6 151 aa10.4□□□□□ -0.74
SF3B6-201ENST00000233468 PSD4Q8NDX1 1056 aa10.4□□□□□ -0.74
SF3B6-201ENST00000233468 FAM13CQ8NE31 585 aa10.4□□□□□ -0.74
SF3B6-201ENST00000233468 OR56A1Q8NGH5 318 aa10.4□□□□□ -0.74
SF3B6-201ENST00000233468 FAR1Q8WVX9 515 aa10.4□□□□□ -0.74
SF3B6-201ENST00000233468 STON2Q8WXE9 905 aa10.4□□□□□ -0.74
SF3B6-201ENST00000233468 TMCO6Q96DC7 493 aa10.4□□□□□ -0.74
SF3B6-201ENST00000233468 DTNBP1Q96EV8 351 aa10.4□□□□□ -0.74
SF3B6-201ENST00000233468 MAGED4Q96JG8 741 aa10.4□□□□□ -0.74
SF3B6-201ENST00000233468 BTBD9Q96Q07 612 aa10.4□□□□□ -0.74
SF3B6-201ENST00000233468 ITPAQ9BY32 194 aa10.4□□□□□ -0.74
SF3B6-201ENST00000233468 FOLH1BQ9HBA9 442 aa10.4□□□□□ -0.74
SF3B6-201ENST00000233468 Q9N2J8 555 aa10.4□□□□□ -0.74
SF3B6-201ENST00000233468 OLAHQ9NV23 265 aa10.4□□□□□ -0.74
SF3B6-201ENST00000233468 MRGBPQ9NV56 204 aa10.4□□□□□ -0.74
SF3B6-201ENST00000233468 ZIM2Q9NZV7 527 aa10.4□□□□□ -0.74
SF3B6-201ENST00000233468 TRIM33Q9UPN9 1127 aa10.4□□□□□ -0.74
SF3B6-201ENST00000233468 GPR55Q9Y2T6 319 aaPredicted RBP10.4□□□□□ -0.74
SF3B6-201ENST00000233468 SNX8Q9Y5X2 465 aa10.4□□□□□ -0.74
SF3B6-201ENST00000233468 DOPEY1Q5JWR5 2465 aa10.4□□□□□ -0.75
SF3B6-201ENST00000233468 DIDO1Q9BTC0 2240 aaKnown RBP10.39□□□□□ -0.75
SF3B6-201ENST00000233468 PRSS51A0A1B0GVH4 220 aa10.39□□□□□ -0.75
SF3B6-201ENST00000233468 ASPDHA6ND91 283 aa10.39□□□□□ -0.75
SF3B6-201ENST00000233468 J3QL48 77 aa10.39□□□□□ -0.75
SF3B6-201ENST00000233468 ACOT7O00154 380 aa10.39□□□□□ -0.75
SF3B6-201ENST00000233468 ZNF195O14628 629 aa10.39□□□□□ -0.75
SF3B6-201ENST00000233468 PEX1O43933 1283 aa10.39□□□□□ -0.75
SF3B6-201ENST00000233468 HS6ST1O60243 411 aa10.39□□□□□ -0.75
SF3B6-201ENST00000233468 EDF1O60869 148 aaKnown RBP10.39□□□□□ -0.75
SF3B6-201ENST00000233468 PPM1BO75688 479 aa10.39□□□□□ -0.75
SF3B6-201ENST00000233468 SLC22A3O75751 556 aa10.39□□□□□ -0.75
SF3B6-201ENST00000233468 NADKO95544 446 aaPredicted RBP10.39□□□□□ -0.75
SF3B6-201ENST00000233468 CLDN1O95832 211 aa10.39□□□□□ -0.75
SF3B6-201ENST00000233468 IL6P05231 212 aa10.39□□□□□ -0.75
SF3B6-201ENST00000233468 CNR1P21554 472 aa10.39□□□□□ -0.75
SF3B6-201ENST00000233468 ABCD3P28288 659 aa10.39□□□□□ -0.75
SF3B6-201ENST00000233468 IL12BP29460 328 aa10.39□□□□□ -0.75
SF3B6-201ENST00000233468 PTGER1P34995 402 aa10.39□□□□□ -0.75
SF3B6-201ENST00000233468 IDH3AP50213 366 aa10.39□□□□□ -0.75
SF3B6-201ENST00000233468 PRKAG1P54619 331 aa10.39□□□□□ -0.75
SF3B6-201ENST00000233468 TP53BP2Q13625 1128 aa10.39□□□□□ -0.75
SF3B6-201ENST00000233468 EFR3AQ14156 821 aa10.39□□□□□ -0.75
SF3B6-201ENST00000233468 NTRK2Q16620 822 aa10.39□□□□□ -0.75
SF3B6-201ENST00000233468 PRSS53Q2L4Q9 553 aa10.39□□□□□ -0.75
SF3B6-201ENST00000233468 CYP27C1Q4G0S4 372 aa10.39□□□□□ -0.75
SF3B6-201ENST00000233468 KRTCAP3Q53RY4 240 aa10.39□□□□□ -0.75
SF3B6-201ENST00000233468 TMEM64Q6YI46 380 aa10.39□□□□□ -0.75
SF3B6-201ENST00000233468 NUP54Q7Z3B4 507 aa10.39□□□□□ -0.75
SF3B6-201ENST00000233468 MIER2Q8N344 545 aa10.39□□□□□ -0.75
SF3B6-201ENST00000233468 TRIML2Q8N7C3 387 aa10.39□□□□□ -0.75
SF3B6-201ENST00000233468 NUP43Q8NFH3 380 aa10.39□□□□□ -0.75
SF3B6-201ENST00000233468 PSMA8Q8TAA3 256 aa10.39□□□□□ -0.75
SF3B6-201ENST00000233468 SFXN5Q8TD22 340 aa10.39□□□□□ -0.75
SF3B6-201ENST00000233468 GRHL3Q8TE85 626 aa10.39□□□□□ -0.75
SF3B6-201ENST00000233468 PAQR8Q8TEZ7 354 aa10.39□□□□□ -0.75
SF3B6-201ENST00000233468 VSTM2LQ96N03 204 aa10.39□□□□□ -0.75
SF3B6-201ENST00000233468 MS4A4EQ96PG1 132 aa10.39□□□□□ -0.75
SF3B6-201ENST00000233468 FAM173AQ9BQD7 235 aa10.39□□□□□ -0.75
SF3B6-201ENST00000233468 NXF5Q9H1B4 397 aaKnown RBP10.39□□□□□ -0.75
SF3B6-201ENST00000233468 RABEP2Q9H5N1 569 aa10.39□□□□□ -0.75
SF3B6-201ENST00000233468 HHATLQ9HCP6 504 aa10.39□□□□□ -0.75
SF3B6-201ENST00000233468 TMEM45AQ9NWC5 275 aa10.39□□□□□ -0.75
SF3B6-201ENST00000233468 FAM120CQ9NX05 1096 aaKnown RBP10.39□□□□□ -0.75
SF3B6-201ENST00000233468 NTMQ9P121 344 aa10.39□□□□□ -0.75
SF3B6-201ENST00000233468 PCDHGB3Q9Y5G1 929 aa10.39□□□□□ -0.75
SF3B6-201ENST00000233468 GPR45Q9Y5Y3 372 aa10.39□□□□□ -0.75
SF3B6-201ENST00000233468 CNTRLQ7Z7A1 2325 aa10.39□□□□□ -0.75
SF3B6-201ENST00000233468 ZGRF1Q86YA3 2104 aa10.39□□□□□ -0.75
SF3B6-201ENST00000233468 SVILO95425 2214 aa10.38□□□□□ -0.75
SF3B6-201ENST00000233468 ANKRD33BA6NCL7 494 aa10.38□□□□□ -0.75
SF3B6-201ENST00000233468 ST8SIA5O15466 376 aa10.38□□□□□ -0.75
SF3B6-201ENST00000233468 REM1O75628 298 aa10.38□□□□□ -0.75
SF3B6-201ENST00000233468 SNX4O95219 450 aa10.38□□□□□ -0.75
SF3B6-201ENST00000233468 KCNH1O95259 989 aa10.38□□□□□ -0.75
SF3B6-201ENST00000233468 PSMG1O95456 288 aa10.38□□□□□ -0.75
SF3B6-201ENST00000233468 C6orf47O95873 294 aa10.38□□□□□ -0.75
SF3B6-201ENST00000233468 VIMP08670 466 aaKnown RBP10.38□□□□□ -0.75
SF3B6-201ENST00000233468 ALDOCP09972 364 aaKnown RBP10.38□□□□□ -0.75
SF3B6-201ENST00000233468 EDN3P14138 238 aa10.38□□□□□ -0.75
SF3B6-201ENST00000233468 ZNF24P17028 368 aa10.38□□□□□ -0.75
SF3B6-201ENST00000233468 CCT3P49368 545 aaKnown RBP10.38□□□□□ -0.75
SF3B6-201ENST00000233468 CLK3P49761 638 aaKnown RBP10.38□□□□□ -0.75
SF3B6-201ENST00000233468 MEOX1P50221 254 aa10.38□□□□□ -0.75
SF3B6-201ENST00000233468 ALDH6A1Q02252 535 aaKnown RBP10.38□□□□□ -0.75
SF3B6-201ENST00000233468 PLGLB1Q02325 96 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms