RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 OR52I1Q8NGK6 324 aa19.34■□□□□ 0.69
SNX3-201ENST00000230085 ENKURQ8TC29 256 aa19.34■□□□□ 0.69
SNX3-201ENST00000230085 IL4I1Q96RQ9 567 aa19.34■□□□□ 0.69
SNX3-201ENST00000230085 C6orf106Q9H6K1 298 aaPredicted RBP19.34■□□□□ 0.69
SNX3-201ENST00000230085 BOLA1Q9Y3E2 137 aa19.34■□□□□ 0.69
SNX3-201ENST00000230085 TRPM6Q9BX84 2022 aa19.34■□□□□ 0.69
SNX3-201ENST00000230085 THADAQ6YHU6 1953 aa19.34■□□□□ 0.69
SNX3-201ENST00000230085 CEP192Q8TEP8 1941 aa19.34■□□□□ 0.69
SNX3-201ENST00000230085 FANCMQ8IYD8 2048 aa19.34■□□□□ 0.69
SNX3-201ENST00000230085 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.34■□□□□ 0.69
SNX3-201ENST00000230085 ARHGEF9O43307 516 aa19.34■□□□□ 0.69
SNX3-201ENST00000230085 LILRB5O75023 590 aa19.34■□□□□ 0.69
SNX3-201ENST00000230085 PCDH8O95206 1070 aa19.34■□□□□ 0.69
SNX3-201ENST00000230085 H1F0P07305 194 aaKnown RBP19.34■□□□□ 0.69
SNX3-201ENST00000230085 GALP22466 123 aa19.34■□□□□ 0.69
SNX3-201ENST00000230085 GPC1P35052 558 aa19.34■□□□□ 0.69
SNX3-201ENST00000230085 WNT4P56705 351 aa19.34■□□□□ 0.69
SNX3-201ENST00000230085 HNRNPA0Q13151 305 aaKnown RBP19.34■□□□□ 0.69
SNX3-201ENST00000230085 SF1Q15637 639 aaKnown RBP19.34■□□□□ 0.69
SNX3-201ENST00000230085 PLET1Q6UQ28 207 aa19.34■□□□□ 0.69
SNX3-201ENST00000230085 ANGPTL8Q6UXH0 198 aa19.34■□□□□ 0.69
SNX3-201ENST00000230085 CEACAM20Q6UY09 585 aa19.34■□□□□ 0.69
SNX3-201ENST00000230085 PRICKLE2Q7Z3G6 844 aa19.34■□□□□ 0.69
SNX3-201ENST00000230085 TMEFF1Q8IYR6 380 aa19.34■□□□□ 0.69
SNX3-201ENST00000230085 TRAM1L1Q8N609 369 aa19.34■□□□□ 0.69
SNX3-201ENST00000230085 KATNB1Q9BVA0 655 aa19.34■□□□□ 0.69
SNX3-201ENST00000230085 SGPP1Q9BX95 441 aa19.34■□□□□ 0.69
SNX3-201ENST00000230085 DNAJC27Q9NZQ0 273 aa19.34■□□□□ 0.69
SNX3-201ENST00000230085 CARD8Q9Y2G2 431 aa19.34■□□□□ 0.69
SNX3-201ENST00000230085 FRYLO94915 3013 aa19.33■□□□□ 0.69
SNX3-201ENST00000230085 SPAG17Q6Q759 2223 aa19.33■□□□□ 0.69
SNX3-201ENST00000230085 A0A1W2PRB8 838 aa19.33■□□□□ 0.68
SNX3-201ENST00000230085 A0A1W2PRQ8 180 aa19.33■□□□□ 0.68
SNX3-201ENST00000230085 PLD2O14939 933 aa19.33■□□□□ 0.68
SNX3-201ENST00000230085 TSPAN19P0C672 248 aa19.33■□□□□ 0.68
SNX3-201ENST00000230085 AZGP1P25311 298 aaKnown RBP19.33■□□□□ 0.68
SNX3-201ENST00000230085 GABRA5P31644 462 aa19.33■□□□□ 0.68
SNX3-201ENST00000230085 RAB40BQ12829 278 aa19.33■□□□□ 0.68
SNX3-201ENST00000230085 GANABQ14697 944 aaKnown RBP19.33■□□□□ 0.68
SNX3-201ENST00000230085 SLC36A4Q6YBV0 504 aa19.33■□□□□ 0.68
SNX3-201ENST00000230085 LAPTM4BQ86VI4 370 aa19.33■□□□□ 0.68
SNX3-201ENST00000230085 GPR32P1Q8NGA4 272 aa19.33■□□□□ 0.68
SNX3-201ENST00000230085 POLR2J3Q9H1A7 115 aaKnown RBP19.33■□□□□ 0.68
SNX3-201ENST00000230085 B4GALT6Q9UBX8 382 aa19.33■□□□□ 0.68
SNX3-201ENST00000230085 CCDC88CQ9P219 2028 aa19.33■□□□□ 0.68
SNX3-201ENST00000230085 TRDV1A0A1B0GX56 115 aa19.32■□□□□ 0.68
SNX3-201ENST00000230085 LRRC72A6NJI9 287 aa19.32■□□□□ 0.68
SNX3-201ENST00000230085 A8MV72 311 aaPredicted RBP19.32■□□□□ 0.68
SNX3-201ENST00000230085 TFECO14948 347 aaPredicted RBP19.32■□□□□ 0.68
SNX3-201ENST00000230085 MMP12P39900 470 aa19.32■□□□□ 0.68
SNX3-201ENST00000230085 PPP2CBP62714 309 aa19.32■□□□□ 0.68
SNX3-201ENST00000230085 PPP2CAP67775 309 aa19.32■□□□□ 0.68
SNX3-201ENST00000230085 ACSM1Q08AH1 577 aa19.32■□□□□ 0.68
SNX3-201ENST00000230085 ZNF658BQ4V348 819 aaPredicted RBP19.32■□□□□ 0.68
SNX3-201ENST00000230085 SYT14P1Q58G82 188 aa19.32■□□□□ 0.68
SNX3-201ENST00000230085 LIPKQ5VXJ0 399 aa19.32■□□□□ 0.68
SNX3-201ENST00000230085 RFLNAQ6ZTI6 216 aa19.32■□□□□ 0.68
SNX3-201ENST00000230085 AP2M1Q96CW1 435 aa19.32■□□□□ 0.68
SNX3-201ENST00000230085 ZNF354BQ96LW1 612 aa19.32■□□□□ 0.68
SNX3-201ENST00000230085 PKP4Q99569 1192 aa19.32■□□□□ 0.68
SNX3-201ENST00000230085 NLNQ9BYT8 704 aa19.32■□□□□ 0.68
SNX3-201ENST00000230085 ZFR2Q9UPR6 939 aaKnown RBP19.32■□□□□ 0.68
SNX3-201ENST00000230085 GSTK1Q9Y2Q3 226 aa19.32■□□□□ 0.68
SNX3-201ENST00000230085 SLC30A4O14863 429 aa19.32■□□□□ 0.68
SNX3-201ENST00000230085 TSPAN6O43657 245 aa19.32■□□□□ 0.68
SNX3-201ENST00000230085 MMP20O60882 483 aa19.32■□□□□ 0.68
SNX3-201ENST00000230085 SLC16A8O95907 504 aa19.32■□□□□ 0.68
SNX3-201ENST00000230085 NR2F6P10588 404 aa19.32■□□□□ 0.68
SNX3-201ENST00000230085 MAT2AP31153 395 aaKnown RBP19.32■□□□□ 0.68
SNX3-201ENST00000230085 KCNJ5P48544 419 aa19.32■□□□□ 0.68
SNX3-201ENST00000230085 PRLHRP49683 370 aa19.32■□□□□ 0.68
SNX3-201ENST00000230085 CDK5Q00535 292 aa19.32■□□□□ 0.68
SNX3-201ENST00000230085 C2orf80Q0P641 193 aa19.32■□□□□ 0.68
SNX3-201ENST00000230085 SF3A2Q15428 464 aaKnown RBP19.32■□□□□ 0.68
SNX3-201ENST00000230085 TAB1Q15750 504 aa19.32■□□□□ 0.68
SNX3-201ENST00000230085 TATDN3Q17R31 274 aa19.32■□□□□ 0.68
SNX3-201ENST00000230085 ENTPD8Q5MY95 495 aa19.32■□□□□ 0.68
SNX3-201ENST00000230085 ADNP2Q6IQ32 1131 aa19.32■□□□□ 0.68
SNX3-201ENST00000230085 YIPF7Q8N8F6 280 aa19.32■□□□□ 0.68
SNX3-201ENST00000230085 ZNF485Q8NCK3 441 aa19.32■□□□□ 0.68
SNX3-201ENST00000230085 NEIL2Q969S2 332 aa19.32■□□□□ 0.68
SNX3-201ENST00000230085 UBE2E3Q969T4 207 aa19.32■□□□□ 0.68
SNX3-201ENST00000230085 ZSCAN5AQ9BUG6 496 aa19.32■□□□□ 0.68
SNX3-201ENST00000230085 DUSP15Q9H1R2 295 aaPredicted RBP19.32■□□□□ 0.68
SNX3-201ENST00000230085 GIMAP4Q9NUV9 329 aa19.32■□□□□ 0.68
SNX3-201ENST00000230085 ING3Q9NXR8 418 aa19.32■□□□□ 0.68
SNX3-201ENST00000230085 EXOSC1Q9Y3B2 195 aaKnown RBP19.32■□□□□ 0.68
SNX3-201ENST00000230085 MAP4K5Q9Y4K4 846 aa19.32■□□□□ 0.68
SNX3-201ENST00000230085 LRRK1Q38SD2 2015 aa19.31■□□□□ 0.68
SNX3-201ENST00000230085 A0A0G2JMP0 313 aa19.31■□□□□ 0.68
SNX3-201ENST00000230085 A0A1W2PQU0 124 aa19.31■□□□□ 0.68
SNX3-201ENST00000230085 SNTNA6NMZ2 147 aa19.31■□□□□ 0.68
SNX3-201ENST00000230085 RNGTTO60942 597 aaKnown RBP19.31■□□□□ 0.68
SNX3-201ENST00000230085 SEMA7AO75326 666 aa19.31■□□□□ 0.68
SNX3-201ENST00000230085 CRYZL1O95825 349 aa19.31■□□□□ 0.68
SNX3-201ENST00000230085 C1GALT1C1LP0DN25 315 aa19.31■□□□□ 0.68
SNX3-201ENST00000230085 FRKP42685 505 aaPredicted RBP19.31■□□□□ 0.68
SNX3-201ENST00000230085 BTG1P62324 171 aa19.31■□□□□ 0.68
SNX3-201ENST00000230085 DSG2Q14126 1118 aa19.31■□□□□ 0.68
SNX3-201ENST00000230085 FLYWCH1Q4VC44 716 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms