RNA–Protein interactions for RNA: ENST00000229387.6

RFX4-201, Transcript of regulatory factor X4, humanhuman

TSL 1 (best) BASIC

Gene RFX4, Length 3,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-201ENST00000229387 TBX18O95935 607 aa5.39□□□□□ -1.55
RFX4-201ENST00000229387 LGI1O95970 557 aa5.39□□□□□ -1.55
RFX4-201ENST00000229387 HMBSP08397 361 aa5.39□□□□□ -1.55
RFX4-201ENST00000229387 HNF1AP20823 631 aa5.39□□□□□ -1.55
RFX4-201ENST00000229387 FMO3P31513 532 aa5.39□□□□□ -1.55
RFX4-201ENST00000229387 MAGEA2P43356 314 aa5.39□□□□□ -1.55
RFX4-201ENST00000229387 GLRBP48167 497 aa5.39□□□□□ -1.55
RFX4-201ENST00000229387 RAB5CP51148 216 aa5.39□□□□□ -1.55
RFX4-201ENST00000229387 CTSCP53634 463 aa5.39□□□□□ -1.55
RFX4-201ENST00000229387 POU4F2Q12837 409 aa5.39□□□□□ -1.55
RFX4-201ENST00000229387 BOP1Q14137 746 aaKnown RBP5.39□□□□□ -1.55
RFX4-201ENST00000229387 FSCN1Q16658 493 aaKnown RBP5.39□□□□□ -1.55
RFX4-201ENST00000229387 CAPN13Q6MZZ7 669 aaPredicted RBP5.39□□□□□ -1.55
RFX4-201ENST00000229387 PROSER1Q86XN7 944 aa5.39□□□□□ -1.55
RFX4-201ENST00000229387 DOCK3Q8IZD9 2030 aa5.39□□□□□ -1.55
RFX4-201ENST00000229387 ACVR1CQ8NER5 493 aa5.39□□□□□ -1.55
RFX4-201ENST00000229387 OR11H7Q8NGC8 314 aa5.39□□□□□ -1.55
RFX4-201ENST00000229387 OSTF1Q92882 214 aa5.39□□□□□ -1.55
RFX4-201ENST00000229387 FOXRED1Q96CU9 486 aaPredicted RBP5.39□□□□□ -1.55
RFX4-201ENST00000229387 FCRL4Q96PJ5 515 aa5.39□□□□□ -1.55
RFX4-201ENST00000229387 OR2M2Q96R28 347 aa5.39□□□□□ -1.55
RFX4-201ENST00000229387 PARK7Q99497 189 aaKnown RBP5.39□□□□□ -1.55
RFX4-201ENST00000229387 MAPKAP1Q9BPZ7 522 aa5.39□□□□□ -1.55
RFX4-201ENST00000229387 NUDT16L1Q9BRJ7 211 aaKnown RBP5.39□□□□□ -1.55
RFX4-201ENST00000229387 MESP1Q9BRJ9 268 aa5.39□□□□□ -1.55
RFX4-201ENST00000229387 IL22Q9GZX6 179 aa5.39□□□□□ -1.55
RFX4-201ENST00000229387 SLC26A1Q9H2B4 701 aa5.39□□□□□ -1.55
RFX4-201ENST00000229387 SLC25A32Q9H2D1 315 aa5.39□□□□□ -1.55
RFX4-201ENST00000229387 ASB8Q9H765 288 aa5.39□□□□□ -1.55
RFX4-201ENST00000229387 BCO1Q9HAY6 547 aa5.39□□□□□ -1.55
RFX4-201ENST00000229387 NT5MQ9NPB1 228 aa5.39□□□□□ -1.55
RFX4-201ENST00000229387 SIRT7Q9NRC8 400 aa5.39□□□□□ -1.55
RFX4-201ENST00000229387 FAM120CQ9NX05 1096 aaKnown RBP5.39□□□□□ -1.55
RFX4-201ENST00000229387 NFKBIL1Q9UBC1 381 aaPredicted RBP5.39□□□□□ -1.55
RFX4-201ENST00000229387 HCSTQ9UBK5 93 aa5.39□□□□□ -1.55
RFX4-201ENST00000229387 GABRQQ9UN88 632 aa5.39□□□□□ -1.55
RFX4-201ENST00000229387 PPIEQ9UNP9 301 aaKnown RBP5.39□□□□□ -1.55
RFX4-201ENST00000229387 FNDC3AQ9Y2H6 1198 aaKnown RBP5.39□□□□□ -1.55
RFX4-201ENST00000229387 USP34Q70CQ2 3546 aa5.39□□□□□ -1.55
RFX4-201ENST00000229387 C17orf102A2RUQ5 167 aa5.39□□□□□ -1.55
RFX4-201ENST00000229387 AHRRA9YTQ3 701 aa5.39□□□□□ -1.55
RFX4-201ENST00000229387 SGK494L7N484 410 aa5.39□□□□□ -1.55
RFX4-201ENST00000229387 FOXE1O00358 373 aaPredicted RBP5.39□□□□□ -1.55
RFX4-201ENST00000229387 TPST1O60507 370 aa5.39□□□□□ -1.55
RFX4-201ENST00000229387 KERAO60938 352 aa5.39□□□□□ -1.55
RFX4-201ENST00000229387 NR2F1P10589 423 aa5.39□□□□□ -1.55
RFX4-201ENST00000229387 HAPLN1P10915 354 aaPredicted RBP5.39□□□□□ -1.55
RFX4-201ENST00000229387 ERCC2P18074 760 aa5.39□□□□□ -1.55
RFX4-201ENST00000229387 NPR2P20594 1047 aa5.39□□□□□ -1.55
RFX4-201ENST00000229387 CSNK1DP48730 415 aa5.39□□□□□ -1.55
RFX4-201ENST00000229387 NAE1Q13564 534 aa5.39□□□□□ -1.55
RFX4-201ENST00000229387 OR8G1Q15617 311 aa5.39□□□□□ -1.55
RFX4-201ENST00000229387 PKDCCQ504Y2 493 aa5.39□□□□□ -1.55
RFX4-201ENST00000229387 ZNF805Q5CZA5 627 aa5.39□□□□□ -1.55
RFX4-201ENST00000229387 CERCAMQ5T4B2 595 aa5.39□□□□□ -1.55
RFX4-201ENST00000229387 GDF6Q6KF10 455 aaPredicted RBP5.39□□□□□ -1.55
RFX4-201ENST00000229387 CASP12Q6UXS9 341 aa5.39□□□□□ -1.55
RFX4-201ENST00000229387 MEX3BQ6ZN04 569 aaKnown RBP5.39□□□□□ -1.55
RFX4-201ENST00000229387 CLEC20AQ6ZU45 233 aa5.39□□□□□ -1.55
RFX4-201ENST00000229387 C16orf59Q7L2K0 433 aa5.39□□□□□ -1.55
RFX4-201ENST00000229387 KANSL1Q7Z3B3 1105 aa5.39□□□□□ -1.55
RFX4-201ENST00000229387 PIWIL4Q7Z3Z4 852 aaKnown RBP5.39□□□□□ -1.55
RFX4-201ENST00000229387 DCUN1D3Q8IWE4 304 aa5.39□□□□□ -1.55
RFX4-201ENST00000229387 NPWQ8N729 165 aa5.39□□□□□ -1.55
RFX4-201ENST00000229387 TMEM145Q8NBT3 493 aa5.39□□□□□ -1.55
RFX4-201ENST00000229387 NAXEQ8NCW5 288 aa5.39□□□□□ -1.55
RFX4-201ENST00000229387 DENND6BQ8NEG7 585 aa5.39□□□□□ -1.55
RFX4-201ENST00000229387 OR56A3Q8NH54 315 aa5.39□□□□□ -1.55
RFX4-201ENST00000229387 HMGCLL1Q8TB92 370 aa5.39□□□□□ -1.55
RFX4-201ENST00000229387 XAGE5Q8WWM1 108 aa5.39□□□□□ -1.55
RFX4-201ENST00000229387 SCRN2Q96FV2 425 aa5.39□□□□□ -1.55
RFX4-201ENST00000229387 SF3B5Q9BWJ5 86 aaKnown RBP5.39□□□□□ -1.55
RFX4-201ENST00000229387 POPDC2Q9HBU9 364 aa5.39□□□□□ -1.55
RFX4-201ENST00000229387 TREM1Q9NP99 234 aa5.39□□□□□ -1.55
RFX4-201ENST00000229387 TMEM184BQ9Y519 407 aaPredicted RBP5.39□□□□□ -1.55
RFX4-201ENST00000229387 CHADO15335 359 aa5.39□□□□□ -1.55
RFX4-201ENST00000229387 LYRM1O43325 122 aa5.39□□□□□ -1.55
RFX4-201ENST00000229387 TLR5O60602 858 aa5.39□□□□□ -1.55
RFX4-201ENST00000229387 TRIM13O60858 407 aa5.39□□□□□ -1.55
RFX4-201ENST00000229387 ICOSLGO75144 302 aa5.39□□□□□ -1.55
RFX4-201ENST00000229387 RECQL5O94762 991 aaPredicted RBP5.39□□□□□ -1.55
RFX4-201ENST00000229387 RPP14O95059 124 aaKnown RBP5.39□□□□□ -1.55
RFX4-201ENST00000229387 NXPH2O95156 264 aa5.39□□□□□ -1.55
RFX4-201ENST00000229387 JCHAINP01591 159 aa5.39□□□□□ -1.55
RFX4-201ENST00000229387 ZNF865P0CJ78 1059 aaPredicted RBP5.39□□□□□ -1.55
RFX4-201ENST00000229387 ZNF44P15621 663 aa5.39□□□□□ -1.55
RFX4-201ENST00000229387 LAG3P18627 525 aa5.39□□□□□ -1.55
RFX4-201ENST00000229387 SSTR2P30874 369 aa5.39□□□□□ -1.55
RFX4-201ENST00000229387 OR1E1P30953 314 aa5.39□□□□□ -1.55
RFX4-201ENST00000229387 GPR15P49685 360 aa5.39□□□□□ -1.55
RFX4-201ENST00000229387 MMP16P51512 607 aa5.39□□□□□ -1.55
RFX4-201ENST00000229387 TRAM1Q15629 374 aa5.39□□□□□ -1.55
RFX4-201ENST00000229387 ZBTB6Q15916 424 aa5.39□□□□□ -1.55
RFX4-201ENST00000229387 FAM187BQ17R55 369 aa5.39□□□□□ -1.55
RFX4-201ENST00000229387 TIGD5Q53EQ6 642 aa5.39□□□□□ -1.55
RFX4-201ENST00000229387 COQ5Q5HYK3 327 aa5.39□□□□□ -1.55
RFX4-201ENST00000229387 OTUD3Q5T2D3 398 aaPredicted RBP5.39□□□□□ -1.55
RFX4-201ENST00000229387 ZNF470Q6ECI4 717 aa5.39□□□□□ -1.55
RFX4-201ENST00000229387 RAB12Q6IQ22 244 aa5.39□□□□□ -1.55
RFX4-201ENST00000229387 METAP1DQ6UB28 335 aaPredicted RBP5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms