RNA–Protein interactions for RNA: ENST00000640554.1

SDHD-209, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 5

Gene SDHD, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-209ENST00000640554 C21orf58P58505 322 aa13.11□□□□□ -0.31
SDHD-209ENST00000640554 PLCXD2Q0VAA5 305 aa13.11□□□□□ -0.31
SDHD-209ENST00000640554 DUSP8Q13202 625 aa13.11□□□□□ -0.31
SDHD-209ENST00000640554 EFR3AQ14156 821 aa13.11□□□□□ -0.31
SDHD-209ENST00000640554 SLC10A1Q14973 349 aa13.11□□□□□ -0.31
SDHD-209ENST00000640554 VPS26BQ4G0F5 336 aa13.11□□□□□ -0.31
SDHD-209ENST00000640554 CYP27C1Q4G0S4 372 aa13.11□□□□□ -0.31
SDHD-209ENST00000640554 CT45A2Q5DJT8 189 aa13.11□□□□□ -0.31
SDHD-209ENST00000640554 CMPK2Q5EBM0 449 aa13.11□□□□□ -0.31
SDHD-209ENST00000640554 CPTPQ5TA50 214 aa13.11□□□□□ -0.31
SDHD-209ENST00000640554 CES4AQ5XG92 561 aa13.11□□□□□ -0.31
SDHD-209ENST00000640554 SLC30A6Q6NXT4 461 aa13.11□□□□□ -0.31
SDHD-209ENST00000640554 ZCCHC12Q6PEW1 402 aa13.11□□□□□ -0.31
SDHD-209ENST00000640554 LIX1Q8N485 282 aa13.11□□□□□ -0.31
SDHD-209ENST00000640554 FAM109AQ8N4B1 249 aa13.11□□□□□ -0.31
SDHD-209ENST00000640554 OR7G2Q8NG99 324 aa13.11□□□□□ -0.31
SDHD-209ENST00000640554 GFM2Q969S9 779 aaKnown RBP13.11□□□□□ -0.31
SDHD-209ENST00000640554 TMCO6Q96DC7 493 aa13.11□□□□□ -0.31
SDHD-209ENST00000640554 ATP6V1G3Q96LB4 118 aa13.11□□□□□ -0.31
SDHD-209ENST00000640554 DOHHQ9BU89 302 aa13.11□□□□□ -0.31
SDHD-209ENST00000640554 C20orf27Q9GZN8 174 aa13.11□□□□□ -0.31
SDHD-209ENST00000640554 MANSC1Q9H8J5 431 aa13.11□□□□□ -0.31
SDHD-209ENST00000640554 FOLH1BQ9HBA9 442 aa13.11□□□□□ -0.31
SDHD-209ENST00000640554 C3orf14Q9HBI5 128 aa13.11□□□□□ -0.31
SDHD-209ENST00000640554 NTMQ9P121 344 aa13.11□□□□□ -0.31
SDHD-209ENST00000640554 SUCOQ9UBS9 1254 aaKnown RBP13.11□□□□□ -0.31
SDHD-209ENST00000640554 ERRFI1Q9UJM3 462 aaPredicted RBP13.11□□□□□ -0.31
SDHD-209ENST00000640554 MRTO4Q9UKD2 239 aaKnown RBP13.11□□□□□ -0.31
SDHD-209ENST00000640554 DTX4Q9Y2E6 619 aa13.11□□□□□ -0.31
SDHD-209ENST00000640554 TRGV8A0A0C4DH27 118 aa13.1□□□□□ -0.31
SDHD-209ENST00000640554 OR14I1A6ND48 311 aa13.1□□□□□ -0.31
SDHD-209ENST00000640554 TRPC5OSA6NMA1 111 aa13.1□□□□□ -0.31
SDHD-209ENST00000640554 UPK1AO00322 258 aa13.1□□□□□ -0.31
SDHD-209ENST00000640554 PRRG2O14669 202 aa13.1□□□□□ -0.31
SDHD-209ENST00000640554 SCAMP2O15127 329 aaKnown RBP13.1□□□□□ -0.31
SDHD-209ENST00000640554 SUSD5O60279 629 aa13.1□□□□□ -0.31
SDHD-209ENST00000640554 HCN1O60741 890 aa13.1□□□□□ -0.31
SDHD-209ENST00000640554 SNNO75324 88 aaPredicted RBP13.1□□□□□ -0.31
SDHD-209ENST00000640554 LRATO95237 230 aa13.1□□□□□ -0.31
SDHD-209ENST00000640554 PSMG1O95456 288 aa13.1□□□□□ -0.31
SDHD-209ENST00000640554 LDLRP01130 860 aa13.1□□□□□ -0.31
SDHD-209ENST00000640554 IGHG3P01860 377 aa13.1□□□□□ -0.31
SDHD-209ENST00000640554 ABOP16442 354 aa13.1□□□□□ -0.31
SDHD-209ENST00000640554 GPC1P35052 558 aa13.1□□□□□ -0.31
SDHD-209ENST00000640554 PIGAP37287 484 aa13.1□□□□□ -0.31
SDHD-209ENST00000640554 MC3RP41968 323 aa13.1□□□□□ -0.31
SDHD-209ENST00000640554 CASP3P42574 277 aa13.1□□□□□ -0.31
SDHD-209ENST00000640554 DNASE1L1P49184 302 aa13.1□□□□□ -0.31
SDHD-209ENST00000640554 PNLIPRP2P54317 469 aa13.1□□□□□ -0.31
SDHD-209ENST00000640554 PSMD4P55036 377 aaKnown RBP13.1□□□□□ -0.31
SDHD-209ENST00000640554 CLDN8P56748 225 aa13.1□□□□□ -0.31
SDHD-209ENST00000640554 FBXW4P57775 412 aa13.1□□□□□ -0.31
SDHD-209ENST00000640554 PRSS53Q2L4Q9 553 aa13.1□□□□□ -0.31
SDHD-209ENST00000640554 LSM12Q3MHD2 195 aaKnown RBP13.1□□□□□ -0.31
SDHD-209ENST00000640554 TMEM107Q6UX40 140 aa13.1□□□□□ -0.31
SDHD-209ENST00000640554 COQ8BQ96D53 544 aa13.1□□□□□ -0.31
SDHD-209ENST00000640554 OMA1Q96E52 524 aa13.1□□□□□ -0.31
SDHD-209ENST00000640554 SLC35A4Q96G79 324 aa13.1□□□□□ -0.31
SDHD-209ENST00000640554 COL21A1Q96P44 957 aa13.1□□□□□ -0.31
SDHD-209ENST00000640554 PSMG3-AS1Q96PY0 264 aa13.1□□□□□ -0.31
SDHD-209ENST00000640554 TSPAN10Q9H1Z9 355 aaPredicted RBP13.1□□□□□ -0.31
SDHD-209ENST00000640554 ZNF395Q9H8N7 513 aaPredicted RBP13.1□□□□□ -0.31
SDHD-209ENST00000640554 AKTIPQ9H8T0 292 aa13.1□□□□□ -0.31
SDHD-209ENST00000640554 MEAF6Q9HAF1 191 aa13.1□□□□□ -0.31
SDHD-209ENST00000640554 HHATLQ9HCP6 504 aa13.1□□□□□ -0.31
SDHD-209ENST00000640554 ACKR4Q9NPB9 350 aa13.1□□□□□ -0.31
SDHD-209ENST00000640554 TUBA8Q9NY65 449 aaPredicted RBP13.1□□□□□ -0.31
SDHD-209ENST00000640554 A0A1B0GVC2 190 aa13.09□□□□□ -0.31
SDHD-209ENST00000640554 HMGB1P1B2RPK0 211 aaPredicted RBP13.09□□□□□ -0.31
SDHD-209ENST00000640554 HDAC3O15379 428 aa13.09□□□□□ -0.31
SDHD-209ENST00000640554 TRIM3O75382 744 aaPredicted RBP13.09□□□□□ -0.31
SDHD-209ENST00000640554 REM1O75628 298 aa13.09□□□□□ -0.31
SDHD-209ENST00000640554 ZIC2O95409 532 aaPredicted RBP13.09□□□□□ -0.31
SDHD-209ENST00000640554 LBPP18428 481 aa13.09□□□□□ -0.31
SDHD-209ENST00000640554 ELAVL4P26378 380 aaKnown RBP13.09□□□□□ -0.31
SDHD-209ENST00000640554 PTGER1P34995 402 aa13.09□□□□□ -0.31
SDHD-209ENST00000640554 PTGS2P35354 604 aa13.09□□□□□ -0.31
SDHD-209ENST00000640554 RFC3P40938 356 aa13.09□□□□□ -0.31
SDHD-209ENST00000640554 PRR5P85299 388 aa13.09□□□□□ -0.31
SDHD-209ENST00000640554 PDCD2Q16342 344 aaPredicted RBP13.09□□□□□ -0.31
SDHD-209ENST00000640554 TMEM64Q6YI46 380 aa13.09□□□□□ -0.31
SDHD-209ENST00000640554 SLC44A2Q8IWA5 706 aaPredicted RBP13.09□□□□□ -0.31
SDHD-209ENST00000640554 RIMKLAQ8IXN7 391 aa13.09□□□□□ -0.31
SDHD-209ENST00000640554 TMEM251Q8N6I4 163 aa13.09□□□□□ -0.31
SDHD-209ENST00000640554 SIMC1Q8NDZ2 872 aa13.09□□□□□ -0.31
SDHD-209ENST00000640554 OR5M3Q8NGP4 307 aa13.09□□□□□ -0.31
SDHD-209ENST00000640554 CLHC1Q8NHS4 586 aa13.09□□□□□ -0.31
SDHD-209ENST00000640554 MGARPQ8TDB4 240 aa13.09□□□□□ -0.31
SDHD-209ENST00000640554 OR5P2Q8WZ92 322 aa13.09□□□□□ -0.31
SDHD-209ENST00000640554 NTNG2Q96CW9 530 aa13.09□□□□□ -0.31
SDHD-209ENST00000640554 TMEM41AQ96HV5 264 aa13.09□□□□□ -0.31
SDHD-209ENST00000640554 ZNF597Q96LX8 424 aa13.09□□□□□ -0.31
SDHD-209ENST00000640554 BHLHE41Q9C0J9 482 aaPredicted RBP13.09□□□□□ -0.31
SDHD-209ENST00000640554 METTL7AQ9H8H3 244 aa13.09□□□□□ -0.31
SDHD-209ENST00000640554 PROK2Q9HC23 129 aa13.09□□□□□ -0.31
SDHD-209ENST00000640554 Q9N2J8 555 aa13.09□□□□□ -0.31
SDHD-209ENST00000640554 OR10H1Q9Y4A9 318 aa13.09□□□□□ -0.31
SDHD-209ENST00000640554 SPENQ96T58 3664 aaKnown RBP13.09□□□□□ -0.31
SDHD-209ENST00000640554 A0A1W2PRB8 838 aa13.08□□□□□ -0.32
SDHD-209ENST00000640554 PINLYPA6NC86 204 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms