RNA–Protein interactions for RNA: ENST00000639857.1

PTPN11-207, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 5 BASIC

Gene PTPN11, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-207ENST00000639857 TWIST2Q8WVJ9 160 aa16.23■□□□□ 0.19
PTPN11-207ENST00000639857 HGDQ93099 445 aa16.23■□□□□ 0.19
PTPN11-207ENST00000639857 SLC35A4Q96G79 324 aa16.23■□□□□ 0.19
PTPN11-207ENST00000639857 VSTM2LQ96N03 204 aa16.23■□□□□ 0.19
PTPN11-207ENST00000639857 MECRQ9BV79 373 aa16.23■□□□□ 0.19
PTPN11-207ENST00000639857 TUBB1Q9H4B7 451 aa16.23■□□□□ 0.19
PTPN11-207ENST00000639857 RUBCNLQ9H714 662 aa16.23■□□□□ 0.19
PTPN11-207ENST00000639857 TRAF6Q9Y4K3 522 aa16.23■□□□□ 0.19
PTPN11-207ENST00000639857 NPIPA2E9PIF3 369 aa16.22■□□□□ 0.19
PTPN11-207ENST00000639857 NPIPA3F8WFD2 350 aa16.22■□□□□ 0.19
PTPN11-207ENST00000639857 LSM1O15116 133 aaKnown RBP16.22■□□□□ 0.19
PTPN11-207ENST00000639857 RGS16O15492 202 aaPredicted RBP16.22■□□□□ 0.19
PTPN11-207ENST00000639857 ZNHIT1O43257 154 aa16.22■□□□□ 0.19
PTPN11-207ENST00000639857 WDR1O75083 606 aa16.22■□□□□ 0.19
PTPN11-207ENST00000639857 ERN1O75460 977 aaKnown RBP16.22■□□□□ 0.19
PTPN11-207ENST00000639857 CHRNGP07510 517 aa16.22■□□□□ 0.19
PTPN11-207ENST00000639857 BPGMP07738 259 aa16.22■□□□□ 0.19
PTPN11-207ENST00000639857 HOXD4P09016 255 aaPredicted RBP16.22■□□□□ 0.19
PTPN11-207ENST00000639857 CELA3AP09093 270 aa16.22■□□□□ 0.19
PTPN11-207ENST00000639857 RFPL3SP0C7P2 107 aa16.22■□□□□ 0.19
PTPN11-207ENST00000639857 CT45A8P0DMV1 189 aa16.22■□□□□ 0.19
PTPN11-207ENST00000639857 CT45A9P0DMV2 189 aa16.22■□□□□ 0.19
PTPN11-207ENST00000639857 DDX5P17844 614 aaKnown RBP16.22■□□□□ 0.19
PTPN11-207ENST00000639857 HTR1EP28566 365 aa16.22■□□□□ 0.19
PTPN11-207ENST00000639857 MASP1P48740 699 aa16.22■□□□□ 0.19
PTPN11-207ENST00000639857 NCBP2P52298 156 aaKnown RBP eCLIP16.22■□□□□ 0.19
PTPN11-207ENST00000639857 NNATQ16517 81 aa16.22■□□□□ 0.19
PTPN11-207ENST00000639857 UGT3A2Q3SY77 523 aa16.22■□□□□ 0.19
PTPN11-207ENST00000639857 GXYLT1Q4G148 440 aa16.22■□□□□ 0.19
PTPN11-207ENST00000639857 CT45A2Q5DJT8 189 aa16.22■□□□□ 0.19
PTPN11-207ENST00000639857 WLSQ5T9L3 541 aa16.22■□□□□ 0.19
PTPN11-207ENST00000639857 ACAD11Q709F0 780 aa16.22■□□□□ 0.19
PTPN11-207ENST00000639857 PRR22Q8IZ63 422 aa16.22■□□□□ 0.19
PTPN11-207ENST00000639857 SIMC1Q8NDZ2 872 aa16.22■□□□□ 0.19
PTPN11-207ENST00000639857 OR7G2Q8NG99 324 aa16.22■□□□□ 0.19
PTPN11-207ENST00000639857 OR6Y1Q8NGX8 325 aa16.22■□□□□ 0.19
PTPN11-207ENST00000639857 OR2T11Q8NH01 316 aa16.22■□□□□ 0.19
PTPN11-207ENST00000639857 NEIL3Q8TAT5 605 aa16.22■□□□□ 0.19
PTPN11-207ENST00000639857 KAT2AQ92830 837 aa16.22■□□□□ 0.19
PTPN11-207ENST00000639857 DTNBP1Q96EV8 351 aa16.22■□□□□ 0.19
PTPN11-207ENST00000639857 JSRP1Q96MG2 331 aaPredicted RBP16.22■□□□□ 0.19
PTPN11-207ENST00000639857 UBQLN3Q9H347 655 aa16.22■□□□□ 0.19
PTPN11-207ENST00000639857 EXO5Q9H790 373 aa16.22■□□□□ 0.19
PTPN11-207ENST00000639857 METTL7AQ9H8H3 244 aa16.22■□□□□ 0.19
PTPN11-207ENST00000639857 C19orf53Q9UNZ5 99 aaPredicted RBP16.22■□□□□ 0.19
PTPN11-207ENST00000639857 EXO1Q9UQ84 846 aaKnown RBP16.22■□□□□ 0.19
PTPN11-207ENST00000639857 C15orf41Q9Y2V0 281 aa16.22■□□□□ 0.19
PTPN11-207ENST00000639857 TM9SF1O15321 606 aa16.21■□□□□ 0.19
PTPN11-207ENST00000639857 SNUPNO95149 360 aaKnown RBP16.21■□□□□ 0.19
PTPN11-207ENST00000639857 PSMG1O95456 288 aa16.21■□□□□ 0.19
PTPN11-207ENST00000639857 JUNP05412 331 aaKnown RBP16.21■□□□□ 0.19
PTPN11-207ENST00000639857 HPNP05981 417 aa16.21■□□□□ 0.19
PTPN11-207ENST00000639857 GABRA1P14867 456 aa16.21■□□□□ 0.19
PTPN11-207ENST00000639857 SDC1P18827 310 aa16.21■□□□□ 0.19
PTPN11-207ENST00000639857 ACVR2AP27037 513 aa16.21■□□□□ 0.19
PTPN11-207ENST00000639857 GDF1P27539 372 aa16.21■□□□□ 0.19
PTPN11-207ENST00000639857 PTGER4P35408 488 aa16.21■□□□□ 0.19
PTPN11-207ENST00000639857 ASMTP46597 345 aa16.21■□□□□ 0.19
PTPN11-207ENST00000639857 RPL38P63173 70 aaKnown RBP16.21■□□□□ 0.19
PTPN11-207ENST00000639857 MRPS22P82650 360 aaKnown RBP16.21■□□□□ 0.19
PTPN11-207ENST00000639857 EFR3AQ14156 821 aa16.21■□□□□ 0.19
PTPN11-207ENST00000639857 XKR7Q5GH72 579 aa16.21■□□□□ 0.19
PTPN11-207ENST00000639857 FNDC7Q5VTL7 733 aa16.21■□□□□ 0.19
PTPN11-207ENST00000639857 SP5Q6BEB4 398 aaPredicted RBP16.21■□□□□ 0.19
PTPN11-207ENST00000639857 C3P1Q6ZMU1 363 aa16.21■□□□□ 0.19
PTPN11-207ENST00000639857 OR2L13Q8N349 312 aa16.21■□□□□ 0.19
PTPN11-207ENST00000639857 LIX1Q8N485 282 aa16.21■□□□□ 0.19
PTPN11-207ENST00000639857 ASB5Q8WWX0 329 aa16.21■□□□□ 0.19
PTPN11-207ENST00000639857 RND1Q92730 232 aa16.21■□□□□ 0.19
PTPN11-207ENST00000639857 TMCO6Q96DC7 493 aa16.21■□□□□ 0.19
PTPN11-207ENST00000639857 MTERF3Q96E29 417 aa16.21■□□□□ 0.19
PTPN11-207ENST00000639857 PPP3R2Q96LZ3 170 aa16.21■□□□□ 0.19
PTPN11-207ENST00000639857 AMDHD1Q96NU7 426 aa16.21■□□□□ 0.19
PTPN11-207ENST00000639857 COL21A1Q96P44 957 aa16.21■□□□□ 0.19
PTPN11-207ENST00000639857 OSBPL11Q9BXB4 747 aa16.21■□□□□ 0.19
PTPN11-207ENST00000639857 FOLH1BQ9HBA9 442 aa16.21■□□□□ 0.19
PTPN11-207ENST00000639857 PNPLA3Q9NST1 481 aa16.21■□□□□ 0.19
PTPN11-207ENST00000639857 FIS1Q9Y3D6 152 aa16.21■□□□□ 0.19
PTPN11-207ENST00000639857 HRH3Q9Y5N1 445 aa16.21■□□□□ 0.19
PTPN11-207ENST00000639857 PTGDR2Q9Y5Y4 395 aa16.21■□□□□ 0.19
PTPN11-207ENST00000639857 ACTL7BQ9Y614 415 aa16.21■□□□□ 0.19
PTPN11-207ENST00000639857 CELSR2Q9HCU4 2923 aa16.21■□□□□ 0.18
PTPN11-207ENST00000639857 NBPF19A0A087WUL8 3843 aa16.2■□□□□ 0.18
PTPN11-207ENST00000639857 TTC36A6NLP5 189 aa16.2■□□□□ 0.18
PTPN11-207ENST00000639857 TMEM114B3SHH9 223 aa16.2■□□□□ 0.18
PTPN11-207ENST00000639857 FAM47E-STBD1D6RA91 191 aa16.2■□□□□ 0.18
PTPN11-207ENST00000639857 CTIFO43310 598 aaKnown RBP16.2■□□□□ 0.18
PTPN11-207ENST00000639857 UGT2B11O75310 529 aa16.2■□□□□ 0.18
PTPN11-207ENST00000639857 LRATO95237 230 aa16.2■□□□□ 0.18
PTPN11-207ENST00000639857 LINC00032P0C843 101 aa16.2■□□□□ 0.18
PTPN11-207ENST00000639857 CREB1P16220 341 aa16.2■□□□□ 0.18
PTPN11-207ENST00000639857 ENDOUP21128 410 aaKnown RBP16.2■□□□□ 0.18
PTPN11-207ENST00000639857 TACR1P25103 407 aa16.2■□□□□ 0.18
PTPN11-207ENST00000639857 MAPK1P28482 360 aa16.2■□□□□ 0.18
PTPN11-207ENST00000639857 KRT20P35900 424 aa16.2■□□□□ 0.18
PTPN11-207ENST00000639857 PDE7AQ13946 482 aa16.2■□□□□ 0.18
PTPN11-207ENST00000639857 RFTN2Q52LD8 501 aaPredicted RBP16.2■□□□□ 0.18
PTPN11-207ENST00000639857 TNFAIP8L3Q5GJ75 292 aa16.2■□□□□ 0.18
PTPN11-207ENST00000639857 SH2D4BQ5SQS7 431 aa16.2■□□□□ 0.18
PTPN11-207ENST00000639857 BICRALQ6AI39 1079 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 413.4 ms