RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 ABHD13Q7L211 337 aa20.17■□□□□ 0.82
CLN6-224ENST00000638076 SLC46A3Q7Z3Q1 461 aa20.17■□□□□ 0.82
CLN6-224ENST00000638076 EGFL6Q8IUX8 553 aa20.17■□□□□ 0.82
CLN6-224ENST00000638076 SLC16A11Q8NCK7 471 aa20.17■□□□□ 0.82
CLN6-224ENST00000638076 CRELD1Q96HD1 420 aa20.17■□□□□ 0.82
CLN6-224ENST00000638076 ZNF576Q9H609 170 aa20.17■□□□□ 0.82
CLN6-224ENST00000638076 ZBTB20Q9HC78 741 aaPredicted RBP20.17■□□□□ 0.82
CLN6-224ENST00000638076 PALMDQ9NP74 551 aa20.17■□□□□ 0.82
CLN6-224ENST00000638076 EVA1BQ9NVM1 165 aa20.17■□□□□ 0.82
CLN6-224ENST00000638076 SLC13A4Q9UKG4 626 aa20.17■□□□□ 0.82
CLN6-224ENST00000638076 GPR55Q9Y2T6 319 aaPredicted RBP20.17■□□□□ 0.82
CLN6-224ENST00000638076 BRWD1Q9NSI6 2320 aa20.17■□□□□ 0.82
CLN6-224ENST00000638076 ANKRD33BA6NCL7 494 aa20.16■□□□□ 0.82
CLN6-224ENST00000638076 SYT5O00445 386 aa20.16■□□□□ 0.82
CLN6-224ENST00000638076 FRS3O43559 492 aa20.16■□□□□ 0.82
CLN6-224ENST00000638076 CNOT3O75175 753 aaKnown RBP20.16■□□□□ 0.82
CLN6-224ENST00000638076 CELA2BP08218 269 aaPredicted RBP20.16■□□□□ 0.82
CLN6-224ENST00000638076 GADD45AP24522 165 aa20.16■□□□□ 0.82
CLN6-224ENST00000638076 TLX1P31314 330 aaPredicted RBP20.16■□□□□ 0.82
CLN6-224ENST00000638076 SLC15A1P46059 708 aa20.16■□□□□ 0.82
CLN6-224ENST00000638076 TMEFF1Q8IYR6 380 aa20.16■□□□□ 0.82
CLN6-224ENST00000638076 LINC00471Q8N535 108 aa20.16■□□□□ 0.82
CLN6-224ENST00000638076 TMCO5AQ8N6Q1 288 aa20.16■□□□□ 0.82
CLN6-224ENST00000638076 SIMC1Q8NDZ2 872 aa20.16■□□□□ 0.82
CLN6-224ENST00000638076 ZFPM2Q8WW38 1151 aa20.16■□□□□ 0.82
CLN6-224ENST00000638076 RERGQ96A58 199 aaPredicted RBP20.16■□□□□ 0.82
CLN6-224ENST00000638076 MS4A4EQ96PG1 132 aa20.16■□□□□ 0.82
CLN6-224ENST00000638076 CDCA4Q9BXL8 241 aa20.16■□□□□ 0.82
CLN6-224ENST00000638076 SLC25A19Q9HC21 320 aa20.16■□□□□ 0.82
CLN6-224ENST00000638076 POT1Q9NUX5 634 aa20.16■□□□□ 0.82
CLN6-224ENST00000638076 GALNT8Q9NY28 637 aa20.16■□□□□ 0.82
CLN6-224ENST00000638076 DNAJC27Q9NZQ0 273 aa20.16■□□□□ 0.82
CLN6-224ENST00000638076 MRPS2Q9Y399 296 aaKnown RBP20.16■□□□□ 0.82
CLN6-224ENST00000638076 C2orf74A8MZ97 194 aa20.16■□□□□ 0.82
CLN6-224ENST00000638076 CLDN25C9JDP6 229 aa20.16■□□□□ 0.82
CLN6-224ENST00000638076 H0YGG7 62 aa20.16■□□□□ 0.82
CLN6-224ENST00000638076 FCMRO60667 390 aa20.16■□□□□ 0.82
CLN6-224ENST00000638076 ZIC2O95409 532 aaPredicted RBP20.16■□□□□ 0.82
CLN6-224ENST00000638076 HSMCR30P0CW71 290 aa20.16■□□□□ 0.82
CLN6-224ENST00000638076 IDUAP35475 653 aa20.16■□□□□ 0.82
CLN6-224ENST00000638076 PDX1P52945 283 aa20.16■□□□□ 0.82
CLN6-224ENST00000638076 TAS2R41P59536 307 aa20.16■□□□□ 0.82
CLN6-224ENST00000638076 ARF3P61204 181 aaPredicted RBP20.16■□□□□ 0.82
CLN6-224ENST00000638076 COX10Q12887 443 aa20.16■□□□□ 0.82
CLN6-224ENST00000638076 INAVAQ3KP66 663 aa20.16■□□□□ 0.82
CLN6-224ENST00000638076 ARMCX4Q5H9R4 360 aa20.16■□□□□ 0.82
CLN6-224ENST00000638076 PLAG1Q6DJT9 500 aa20.16■□□□□ 0.82
CLN6-224ENST00000638076 MFSD12Q6NUT3 480 aa20.16■□□□□ 0.82
CLN6-224ENST00000638076 SAMD14Q8IZD0 417 aaPredicted RBP20.16■□□□□ 0.82
CLN6-224ENST00000638076 IQCF1Q8N6M8 205 aa20.16■□□□□ 0.82
CLN6-224ENST00000638076 C9orf43Q8TAL5 461 aaPredicted RBP20.16■□□□□ 0.82
CLN6-224ENST00000638076 GPA33Q99795 319 aa20.16■□□□□ 0.82
CLN6-224ENST00000638076 NTMQ9P121 344 aa20.16■□□□□ 0.82
CLN6-224ENST00000638076 CHST2Q9Y4C5 530 aa20.16■□□□□ 0.82
CLN6-224ENST00000638076 SLC22A7Q9Y694 548 aa20.16■□□□□ 0.82
CLN6-224ENST00000638076 LRP4O75096 1905 aa20.15■□□□□ 0.82
CLN6-224ENST00000638076 ALOX12P18054 663 aa20.15■□□□□ 0.82
CLN6-224ENST00000638076 ZNF10P21506 573 aaPredicted RBP20.15■□□□□ 0.82
CLN6-224ENST00000638076 ALDH6A1Q02252 535 aaKnown RBP20.15■□□□□ 0.82
CLN6-224ENST00000638076 FAM214AQ32MH5 1076 aa20.15■□□□□ 0.82
CLN6-224ENST00000638076 C1orf94Q6P1W5 598 aa20.15■□□□□ 0.82
CLN6-224ENST00000638076 CD300LDQ6UXZ3 194 aa20.15■□□□□ 0.82
CLN6-224ENST00000638076 SLC9A6Q92581 669 aa20.15■□□□□ 0.82
CLN6-224ENST00000638076 Q96MT0 163 aa20.15■□□□□ 0.82
CLN6-224ENST00000638076 ARHGDIGQ99819 225 aa20.15■□□□□ 0.82
CLN6-224ENST00000638076 GSDMCQ9BYG8 508 aa20.15■□□□□ 0.82
CLN6-224ENST00000638076 POLMQ9NP87 494 aaPredicted RBP20.15■□□□□ 0.82
CLN6-224ENST00000638076 HRASLS2Q9NWW9 162 aa20.15■□□□□ 0.82
CLN6-224ENST00000638076 NDRG2Q9UN36 371 aaKnown RBP20.15■□□□□ 0.82
CLN6-224ENST00000638076 CYP8B1Q9UNU6 501 aa20.15■□□□□ 0.82
CLN6-224ENST00000638076 ENTPD2Q9Y5L3 495 aa20.15■□□□□ 0.82
CLN6-224ENST00000638076 DUXAA6NLW8 204 aa20.15■□□□□ 0.82
CLN6-224ENST00000638076 C10orf142B7Z368 130 aa20.15■□□□□ 0.82
CLN6-224ENST00000638076 PFDN1O60925 122 aa20.15■□□□□ 0.82
CLN6-224ENST00000638076 UBE2IP63279 158 aaKnown RBP20.15■□□□□ 0.82
CLN6-224ENST00000638076 ZNF846Q147U1 533 aa20.15■□□□□ 0.82
CLN6-224ENST00000638076 CDC73Q6P1J9 531 aa20.15■□□□□ 0.82
CLN6-224ENST00000638076 Q6ZNX1 250 aa20.15■□□□□ 0.82
CLN6-224ENST00000638076 PRSS41Q7RTY9 318 aa20.15■□□□□ 0.82
CLN6-224ENST00000638076 IGFN1Q86VF2 1251 aa20.15■□□□□ 0.82
CLN6-224ENST00000638076 SHISA5Q8N114 240 aa20.15■□□□□ 0.82
CLN6-224ENST00000638076 TCEANCQ8N8B7 351 aa20.15■□□□□ 0.82
CLN6-224ENST00000638076 BAHD1Q8TBE0 780 aaPredicted RBP20.15■□□□□ 0.82
CLN6-224ENST00000638076 SLC37A2Q8TED4 501 aa20.15■□□□□ 0.82
CLN6-224ENST00000638076 CDS1Q92903 461 aa20.15■□□□□ 0.82
CLN6-224ENST00000638076 ABTB1Q969K4 478 aaPredicted RBP20.15■□□□□ 0.82
CLN6-224ENST00000638076 DCSTAMPQ9H295 470 aa20.15■□□□□ 0.82
CLN6-224ENST00000638076 HMG20AQ9NP66 347 aa20.15■□□□□ 0.82
CLN6-224ENST00000638076 AKIP1Q9NQ31 210 aa20.15■□□□□ 0.82
CLN6-224ENST00000638076 TVP23BQ9NYZ1 205 aa20.15■□□□□ 0.82
CLN6-224ENST00000638076 OSGIN1Q9UJX0 560 aa20.15■□□□□ 0.82
CLN6-224ENST00000638076 PIPP12273 146 aaPredicted RBP20.14■□□□□ 0.82
CLN6-224ENST00000638076 GRK5P34947 590 aa20.14■□□□□ 0.82
CLN6-224ENST00000638076 ID2Q02363 134 aa20.14■□□□□ 0.82
CLN6-224ENST00000638076 EIF2B5Q13144 721 aaKnown RBP20.14■□□□□ 0.82
CLN6-224ENST00000638076 MED22Q15528 200 aa20.14■□□□□ 0.82
CLN6-224ENST00000638076 NDUFA9Q16795 377 aa20.14■□□□□ 0.82
CLN6-224ENST00000638076 TMEM201Q5SNT2 666 aa20.14■□□□□ 0.82
CLN6-224ENST00000638076 HEPHL1Q6MZM0 1159 aa20.14■□□□□ 0.82
CLN6-224ENST00000638076 Q6ZS52 159 aa20.14■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms