RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 DUSP22Q9NRW4 184 aa6.25□□□□□ -1.41
UPF3B-205ENST00000636792 ZCCHC3Q9NUD5 404 aaKnown RBP6.25□□□□□ -1.41
UPF3B-205ENST00000636792 ABI3Q9P2A4 366 aa6.25□□□□□ -1.41
UPF3B-205ENST00000636792 TAGLN3Q9UI15 199 aa6.25□□□□□ -1.41
UPF3B-205ENST00000636792 MRTO4Q9UKD2 239 aaKnown RBP6.25□□□□□ -1.41
UPF3B-205ENST00000636792 C19orf53Q9UNZ5 99 aaPredicted RBP6.25□□□□□ -1.41
UPF3B-205ENST00000636792 NUP214P35658 2090 aaPredicted RBP6.25□□□□□ -1.41
UPF3B-205ENST00000636792 APC2O95996 2303 aa6.25□□□□□ -1.41
UPF3B-205ENST00000636792 DOCK10Q96BY6 2186 aa6.24□□□□□ -1.41
UPF3B-205ENST00000636792 TRBV5-3A0A0A0MS03 114 aa6.24□□□□□ -1.41
UPF3B-205ENST00000636792 RNF103-CHMP3A0A140T963 221 aa6.24□□□□□ -1.41
UPF3B-205ENST00000636792 MRASO14807 208 aa6.24□□□□□ -1.41
UPF3B-205ENST00000636792 TO15178 435 aa6.24□□□□□ -1.41
UPF3B-205ENST00000636792 DNAJB6O75190 326 aa6.24□□□□□ -1.41
UPF3B-205ENST00000636792 CEACAM4O75871 244 aa6.24□□□□□ -1.41
UPF3B-205ENST00000636792 ZFAND5O76080 213 aa6.24□□□□□ -1.41
UPF3B-205ENST00000636792 ANP32DO95626 131 aa6.24□□□□□ -1.41
UPF3B-205ENST00000636792 DDAH2O95865 285 aa6.24□□□□□ -1.41
UPF3B-205ENST00000636792 C6orf47O95873 294 aa6.24□□□□□ -1.41
UPF3B-205ENST00000636792 CBX7O95931 251 aa6.24□□□□□ -1.41
UPF3B-205ENST00000636792 COX4I1P13073 169 aa6.24□□□□□ -1.41
UPF3B-205ENST00000636792 NAGAP17050 411 aa6.24□□□□□ -1.41
UPF3B-205ENST00000636792 HOXB9P17482 250 aaPredicted RBP6.24□□□□□ -1.41
UPF3B-205ENST00000636792 TNNI3P19429 210 aa6.24□□□□□ -1.41
UPF3B-205ENST00000636792 OTX2P32243 289 aa6.24□□□□□ -1.41
UPF3B-205ENST00000636792 MC3RP41968 323 aa6.24□□□□□ -1.41
UPF3B-205ENST00000636792 CCT3P49368 545 aaKnown RBP6.24□□□□□ -1.41
UPF3B-205ENST00000636792 KHKP50053 298 aa6.24□□□□□ -1.41
UPF3B-205ENST00000636792 GPR143P51810 404 aa6.24□□□□□ -1.41
UPF3B-205ENST00000636792 EFNA3P52797 238 aa6.24□□□□□ -1.41
UPF3B-205ENST00000636792 PSMD4P55036 377 aaKnown RBP6.24□□□□□ -1.41
UPF3B-205ENST00000636792 SLC37A1P57057 533 aa6.24□□□□□ -1.41
UPF3B-205ENST00000636792 RPS18P62269 152 aaKnown RBP6.24□□□□□ -1.41
UPF3B-205ENST00000636792 MRPS22P82650 360 aaKnown RBP6.24□□□□□ -1.41
UPF3B-205ENST00000636792 TP53BP2Q13625 1128 aa6.24□□□□□ -1.41
UPF3B-205ENST00000636792 GNA13Q14344 377 aa6.24□□□□□ -1.41
UPF3B-205ENST00000636792 EBPQ15125 230 aaKnown RBP6.24□□□□□ -1.41
UPF3B-205ENST00000636792 TGIF1Q15583 401 aa6.24□□□□□ -1.41
UPF3B-205ENST00000636792 BTBD16Q32M84 506 aa6.24□□□□□ -1.41
UPF3B-205ENST00000636792 C6orf10Q5SRN2 563 aa6.24□□□□□ -1.41
UPF3B-205ENST00000636792 FHL5Q5TD97 284 aa6.24□□□□□ -1.41
UPF3B-205ENST00000636792 PRAMEF8Q5VWM4 474 aa6.24□□□□□ -1.41
UPF3B-205ENST00000636792 PRAMEF7Q5VXH5 474 aa6.24□□□□□ -1.41
UPF3B-205ENST00000636792 SAXO2Q658L1 398 aa6.24□□□□□ -1.41
UPF3B-205ENST00000636792 MFSD12Q6NUT3 480 aa6.24□□□□□ -1.41
UPF3B-205ENST00000636792 H3F3CQ6NXT2 135 aa6.24□□□□□ -1.41
UPF3B-205ENST00000636792 CDC73Q6P1J9 531 aa6.24□□□□□ -1.41
UPF3B-205ENST00000636792 HSDL2Q6YN16 418 aa6.24□□□□□ -1.41
UPF3B-205ENST00000636792 GPR155Q7Z3F1 870 aa6.24□□□□□ -1.41
UPF3B-205ENST00000636792 DHDDSQ86SQ9 333 aa6.24□□□□□ -1.41
UPF3B-205ENST00000636792 SNX32Q86XE0 403 aa6.24□□□□□ -1.41
UPF3B-205ENST00000636792 SLC30A8Q8IWU4 369 aa6.24□□□□□ -1.41
UPF3B-205ENST00000636792 PRSS58Q8IYP2 241 aa6.24□□□□□ -1.41
UPF3B-205ENST00000636792 MMP21Q8N119 569 aa6.24□□□□□ -1.41
UPF3B-205ENST00000636792 FITM2Q8N6M3 262 aa6.24□□□□□ -1.41
UPF3B-205ENST00000636792 ZNF615Q8N8J6 731 aa6.24□□□□□ -1.41
UPF3B-205ENST00000636792 OR4A15Q8NGL6 344 aa6.24□□□□□ -1.41
UPF3B-205ENST00000636792 OR9A2Q8NGT5 310 aa6.24□□□□□ -1.41
UPF3B-205ENST00000636792 ZNF721Q8TF20 911 aa6.24□□□□□ -1.41
UPF3B-205ENST00000636792 POP5Q969H6 163 aaKnown RBP6.24□□□□□ -1.41
UPF3B-205ENST00000636792 FAM120BQ96EK7 910 aaKnown RBP6.24□□□□□ -1.41
UPF3B-205ENST00000636792 HSPBAP1Q96EW2 488 aa6.24□□□□□ -1.41
UPF3B-205ENST00000636792 SENP5Q96HI0 755 aaPredicted RBP6.24□□□□□ -1.41
UPF3B-205ENST00000636792 BTBD9Q96Q07 612 aa6.24□□□□□ -1.41
UPF3B-205ENST00000636792 LMF2Q9BU23 707 aaKnown RBP6.24□□□□□ -1.41
UPF3B-205ENST00000636792 LHPPQ9H008 270 aa6.24□□□□□ -1.41
UPF3B-205ENST00000636792 RNF32Q9H0A6 362 aa6.24□□□□□ -1.41
UPF3B-205ENST00000636792 OR10A5Q9H207 317 aa6.24□□□□□ -1.41
UPF3B-205ENST00000636792 Q9N2J8 555 aa6.24□□□□□ -1.41
UPF3B-205ENST00000636792 SERHLQ9NQF3 203 aa6.24□□□□□ -1.41
UPF3B-205ENST00000636792 POLE3Q9NRF9 147 aa6.24□□□□□ -1.41
UPF3B-205ENST00000636792 PNO1Q9NRX1 252 aaKnown RBP6.24□□□□□ -1.41
UPF3B-205ENST00000636792 SIRT3Q9NTG7 399 aaPredicted RBP6.24□□□□□ -1.41
UPF3B-205ENST00000636792 C5AR2Q9P296 337 aa6.24□□□□□ -1.41
UPF3B-205ENST00000636792 IL17BQ9UHF5 180 aa6.24□□□□□ -1.41
UPF3B-205ENST00000636792 TUBD1Q9UJT1 453 aa6.24□□□□□ -1.41
UPF3B-205ENST00000636792 FBXL4Q9UKA2 621 aa6.24□□□□□ -1.41
UPF3B-205ENST00000636792 PRDM4Q9UKN5 801 aa6.24□□□□□ -1.41
UPF3B-205ENST00000636792 ERVK-19Q9WJR5 959 aa6.24□□□□□ -1.41
UPF3B-205ENST00000636792 PCDHGA9Q9Y5G4 932 aaKnown RBP6.24□□□□□ -1.41
UPF3B-205ENST00000636792 URB1O60287 2271 aaKnown RBP6.23□□□□□ -1.41
UPF3B-205ENST00000636792 ASPDHA6ND91 283 aa6.23□□□□□ -1.41
UPF3B-205ENST00000636792 FRG2CA6NGY1 282 aa6.23□□□□□ -1.41
UPF3B-205ENST00000636792 EVPLLA8MZ36 301 aa6.23□□□□□ -1.41
UPF3B-205ENST00000636792 UPK1AO00322 258 aa6.23□□□□□ -1.41
UPF3B-205ENST00000636792 ALPPP05187 535 aa6.23□□□□□ -1.41
UPF3B-205ENST00000636792 C1QTNF9P0C862 333 aa6.23□□□□□ -1.41
UPF3B-205ENST00000636792 ESRRAP11474 423 aaPredicted RBP6.23□□□□□ -1.41
UPF3B-205ENST00000636792 GPX2P18283 190 aa6.23□□□□□ -1.41
UPF3B-205ENST00000636792 S1PR1P21453 382 aa6.23□□□□□ -1.41
UPF3B-205ENST00000636792 DRD5P21918 477 aa6.23□□□□□ -1.41
UPF3B-205ENST00000636792 SOAT1P35610 550 aa6.23□□□□□ -1.41
UPF3B-205ENST00000636792 CHI3L1P36222 383 aaPredicted RBP6.23□□□□□ -1.41
UPF3B-205ENST00000636792 MAP3K8P41279 467 aa6.23□□□□□ -1.41
UPF3B-205ENST00000636792 PPICP45877 212 aa6.23□□□□□ -1.41
UPF3B-205ENST00000636792 CDK9P50750 372 aaKnown RBP6.23□□□□□ -1.41
UPF3B-205ENST00000636792 PGDP52209 483 aa6.23□□□□□ -1.41
UPF3B-205ENST00000636792 DGKQP52824 942 aa6.23□□□□□ -1.41
UPF3B-205ENST00000636792 NRG3P56975 720 aa6.23□□□□□ -1.41
UPF3B-205ENST00000636792 RNF4P78317 190 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms