RNA–Protein interactions for RNA: ENST00000630907.2

UBE3A-222, Transcript of ubiquitin protein ligase E3A, human

TSL 5

Gene UBE3A, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3A-222	ENST00000630907	SOX3	P41225	446 aa		24.04	■■□□□ 1.44
UBE3A-222	ENST00000630907	CDKN2C	P42773	168 aa		24.04	■■□□□ 1.44
UBE3A-222	ENST00000630907	CYB561	P49447	251 aa		24.04	■■□□□ 1.44
UBE3A-222	ENST00000630907	PRIM2	P49643	509 aa		24.04	■■□□□ 1.44
UBE3A-222	ENST00000630907	NRG3	P56975	720 aa		24.04	■■□□□ 1.44
UBE3A-222	ENST00000630907	TP53BP2	Q13625	1128 aa		24.04	■■□□□ 1.44
UBE3A-222	ENST00000630907	NNAT	Q16517	81 aa		24.04	■■□□□ 1.44
UBE3A-222	ENST00000630907	MFSD12	Q6NUT3	480 aa		24.04	■■□□□ 1.44
UBE3A-222	ENST00000630907	ZCCHC12	Q6PEW1	402 aa		24.04	■■□□□ 1.44
UBE3A-222	ENST00000630907	SLC2A7	Q6PXP3	512 aa		24.04	■■□□□ 1.44
UBE3A-222	ENST00000630907	ZNF621	Q6ZSS3	439 aa		24.04	■■□□□ 1.44
UBE3A-222	ENST00000630907	TRIML2	Q8N7C3	387 aa		24.04	■■□□□ 1.44
UBE3A-222	ENST00000630907	RBMXL3	Q8N7X1	1067 aa	Known RBP	24.04	■■□□□ 1.44
UBE3A-222	ENST00000630907	CDRT4	Q8N9R6	151 aa		24.04	■■□□□ 1.44
UBE3A-222	ENST00000630907	TSPEAR	Q8WU66	669 aa		24.04	■■□□□ 1.44
UBE3A-222	ENST00000630907	LMF2	Q9BU23	707 aa	Known RBP	24.04	■■□□□ 1.44
UBE3A-222	ENST00000630907	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	24.04	■■□□□ 1.44	7e-10	■□□□□ 11.1
UBE3A-222	ENST00000630907	TNRC6A	Q8NDV7	1962 aa	Known RBP	24.03	■■□□□ 1.44
UBE3A-222	ENST00000630907	CPAMD8	Q8IZJ3	1885 aa		24.03	■■□□□ 1.44
UBE3A-222	ENST00000630907	OR6B1	O95007	311 aa		24.03	■■□□□ 1.44
UBE3A-222	ENST00000630907	HMGN2	P05204	90 aa	Known RBP	24.03	■■□□□ 1.44
UBE3A-222	ENST00000630907	GSN	P06396	782 aa		24.03	■■□□□ 1.44
UBE3A-222	ENST00000630907	SNRPB2	P08579	225 aa	Known RBP	24.03	■■□□□ 1.44
UBE3A-222	ENST00000630907	CT45A8	P0DMV1	189 aa		24.03	■■□□□ 1.44
UBE3A-222	ENST00000630907	CT45A9	P0DMV2	189 aa		24.03	■■□□□ 1.44
UBE3A-222	ENST00000630907	CD97	P48960	835 aa		24.03	■■□□□ 1.44
UBE3A-222	ENST00000630907	TRPC1	P48995	793 aa		24.03	■■□□□ 1.44
UBE3A-222	ENST00000630907	CORO7	P57737	925 aa		24.03	■■□□□ 1.44
UBE3A-222	ENST00000630907	TLR1	Q15399	786 aa		24.03	■■□□□ 1.44
UBE3A-222	ENST00000630907	CT45A2	Q5DJT8	189 aa		24.03	■■□□□ 1.44
UBE3A-222	ENST00000630907	C6orf10	Q5SRN2	563 aa		24.03	■■□□□ 1.44
UBE3A-222	ENST00000630907	NPSR1	Q6W5P4	371 aa		24.03	■■□□□ 1.44
UBE3A-222	ENST00000630907	C6orf120	Q7Z4R8	191 aa		24.03	■■□□□ 1.44
UBE3A-222	ENST00000630907	WDR53	Q7Z5U6	358 aa	Predicted RBP	24.03	■■□□□ 1.44
UBE3A-222	ENST00000630907	MTDH	Q86UE4	582 aa	Known RBP	24.03	■■□□□ 1.44
UBE3A-222	ENST00000630907	SLC44A2	Q8IWA5	706 aa	Predicted RBP	24.03	■■□□□ 1.44
UBE3A-222	ENST00000630907	GPALPP1	Q8IXQ4	340 aa		24.03	■■□□□ 1.44
UBE3A-222	ENST00000630907	CLEC4F	Q8N1N0	589 aa		24.03	■■□□□ 1.44
UBE3A-222	ENST00000630907	CATSPER1	Q8NEC5	780 aa		24.03	■■□□□ 1.44
UBE3A-222	ENST00000630907	GTF2H4	Q92759	462 aa		24.03	■■□□□ 1.44
UBE3A-222	ENST00000630907	C16orf58	Q96GQ5	468 aa		24.03	■■□□□ 1.44
UBE3A-222	ENST00000630907	TRIM45	Q9H8W5	580 aa	Predicted RBP	24.03	■■□□□ 1.44
UBE3A-222	ENST00000630907	ARL2BP	Q9Y2Y0	163 aa		24.03	■■□□□ 1.44
UBE3A-222	ENST00000630907	CAPN7	Q9Y6W3	813 aa		24.03	■■□□□ 1.44
UBE3A-222	ENST00000630907	PIEZO2	Q9H5I5	2752 aa		24.03	■■□□□ 1.44
UBE3A-222	ENST00000630907	ASPDH	A6ND91	283 aa		24.02	■■□□□ 1.44
UBE3A-222	ENST00000630907		A8MVJ9	347 aa		24.02	■■□□□ 1.44
UBE3A-222	ENST00000630907	T	O15178	435 aa		24.02	■■□□□ 1.44
UBE3A-222	ENST00000630907	SLC22A2	O15244	555 aa		24.02	■■□□□ 1.44
UBE3A-222	ENST00000630907	ANP32D	O95626	131 aa		24.02	■■□□□ 1.44
UBE3A-222	ENST00000630907	PSG6	Q00889	435 aa		24.02	■■□□□ 1.44
UBE3A-222	ENST00000630907	GAB1	Q13480	694 aa		24.02	■■□□□ 1.44
UBE3A-222	ENST00000630907	LASP1	Q14847	261 aa	Known RBP	24.02	■■□□□ 1.44
UBE3A-222	ENST00000630907	OR1C1	Q15619	314 aa		24.02	■■□□□ 1.44
UBE3A-222	ENST00000630907	IL20RB	Q6UXL0	311 aa		24.02	■■□□□ 1.44
UBE3A-222	ENST00000630907	HOXB13	Q92826	284 aa	Predicted RBP	24.02	■■□□□ 1.44
UBE3A-222	ENST00000630907	SLC35A5	Q9BS91	424 aa		24.02	■■□□□ 1.44
UBE3A-222	ENST00000630907	MFRP	Q9BY79	579 aa		24.02	■■□□□ 1.44
UBE3A-222	ENST00000630907	GPATCH2	Q9NW75	528 aa		24.02	■■□□□ 1.44
UBE3A-222	ENST00000630907	HPF1	Q9NWY4	346 aa		24.02	■■□□□ 1.44
UBE3A-222	ENST00000630907	LRFN1	Q9P244	771 aa		24.02	■■□□□ 1.44
UBE3A-222	ENST00000630907	ARMCX1	Q9P291	453 aa		24.02	■■□□□ 1.44
UBE3A-222	ENST00000630907	FAF1	Q9UNN5	650 aa	Predicted RBP	24.02	■■□□□ 1.44
UBE3A-222	ENST00000630907	CSAG2	Q9Y5P2	127 aa		24.02	■■□□□ 1.44
UBE3A-222	ENST00000630907	NPFFR2	Q9Y5X5	522 aa		24.02	■■□□□ 1.44
UBE3A-222	ENST00000630907	NUP214	P35658	2090 aa	Predicted RBP	24.01	■■□□□ 1.43
UBE3A-222	ENST00000630907	CHI3L1	P36222	383 aa	Predicted RBP	24.01	■■□□□ 1.43
UBE3A-222	ENST00000630907	TNFSF10	P50591	281 aa		24.01	■■□□□ 1.43
UBE3A-222	ENST00000630907	PSPH	P78330	225 aa		24.01	■■□□□ 1.43
UBE3A-222	ENST00000630907	MAPRE2	Q15555	327 aa		24.01	■■□□□ 1.43
UBE3A-222	ENST00000630907	SPINK14	Q6IE38	97 aa		24.01	■■□□□ 1.43
UBE3A-222	ENST00000630907	LYPD8	Q6UX82	237 aa		24.01	■■□□□ 1.43
UBE3A-222	ENST00000630907	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	24.01	■■□□□ 1.43
UBE3A-222	ENST00000630907		Q6ZS92	163 aa		24.01	■■□□□ 1.43
UBE3A-222	ENST00000630907	PRR22	Q8IZ63	422 aa		24.01	■■□□□ 1.43
UBE3A-222	ENST00000630907	CYP4Z2P	Q8N1L4	340 aa		24.01	■■□□□ 1.43
UBE3A-222	ENST00000630907	HORMAD2	Q8N7B1	307 aa		24.01	■■□□□ 1.43
UBE3A-222	ENST00000630907	SLC9A6	Q92581	669 aa		24.01	■■□□□ 1.43
UBE3A-222	ENST00000630907	JADE3	Q92613	823 aa		24.01	■■□□□ 1.43
UBE3A-222	ENST00000630907	YIPF4	Q9BSR8	244 aa		24.01	■■□□□ 1.43
UBE3A-222	ENST00000630907	ACTRT3	Q9BYD9	372 aa		24.01	■■□□□ 1.43
UBE3A-222	ENST00000630907		Q9N2J8	555 aa		24.01	■■□□□ 1.43
UBE3A-222	ENST00000630907	LEF1	Q9UJU2	399 aa	Predicted RBP	24.01	■■□□□ 1.43
UBE3A-222	ENST00000630907	NDUFAF1	Q9Y375	327 aa		24.01	■■□□□ 1.43
UBE3A-222	ENST00000630907	OR10H1	Q9Y4A9	318 aa		24.01	■■□□□ 1.43
UBE3A-222	ENST00000630907	CAPN14	A8MX76	684 aa		24	■■□□□ 1.43
UBE3A-222	ENST00000630907	ANGPT2	O15123	496 aa		24	■■□□□ 1.43
UBE3A-222	ENST00000630907	KRT16	P08779	473 aa		24	■■□□□ 1.43
UBE3A-222	ENST00000630907	ALOX5	P09917	674 aa		24	■■□□□ 1.43
UBE3A-222	ENST00000630907	FBXO45	P0C2W1	286 aa		24	■■□□□ 1.43
UBE3A-222	ENST00000630907	ZCCHC18	P0CG32	403 aa		24	■■□□□ 1.43
UBE3A-222	ENST00000630907	ACP2	P11117	423 aa		24	■■□□□ 1.43
UBE3A-222	ENST00000630907	GABRA3	P34903	492 aa		24	■■□□□ 1.43
UBE3A-222	ENST00000630907	MAP3K8	P41279	467 aa		24	■■□□□ 1.43
UBE3A-222	ENST00000630907	PAGE3	Q5JUK9	113 aa		24	■■□□□ 1.43
UBE3A-222	ENST00000630907	GKAP1	Q5VSY0	366 aa	Predicted RBP	24	■■□□□ 1.43
UBE3A-222	ENST00000630907	SAXO2	Q658L1	398 aa		24	■■□□□ 1.43
UBE3A-222	ENST00000630907	DND1	Q8IYX4	353 aa	Known RBP	24	■■□□□ 1.43
UBE3A-222	ENST00000630907	SLC34A3	Q8N130	599 aa		24	■■□□□ 1.43
UBE3A-222	ENST00000630907	TEX19	Q8NA77	164 aa		24	■■□□□ 1.43

Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms