RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 TRIM64BA6NI03 449 aa20.65■□□□□ 0.9
PNKP-220ENST00000627232 LMO7DNF2Z398 122 aa20.65■□□□□ 0.9
PNKP-220ENST00000627232 RGS10O43665 173 aa20.65■□□□□ 0.9
PNKP-220ENST00000627232 FGF17O60258 216 aa20.65■□□□□ 0.9
PNKP-220ENST00000627232 SOX18P35713 384 aa20.65■□□□□ 0.9
PNKP-220ENST00000627232 UGT2B15P54855 530 aa20.65■□□□□ 0.9
PNKP-220ENST00000627232 MVKQ03426 396 aa20.65■□□□□ 0.9
PNKP-220ENST00000627232 SEC23BQ15437 767 aa20.65■□□□□ 0.9
PNKP-220ENST00000627232 PRSS48Q7RTY5 328 aa20.65■□□□□ 0.9
PNKP-220ENST00000627232 SLC16A11Q8NCK7 471 aa20.65■□□□□ 0.9
PNKP-220ENST00000627232 TMEM52Q8NDY8 209 aa20.65■□□□□ 0.9
PNKP-220ENST00000627232 OR5T3Q8NGG3 340 aa20.65■□□□□ 0.9
PNKP-220ENST00000627232 UBE2FQ969M7 185 aa20.65■□□□□ 0.9
PNKP-220ENST00000627232 HSPA12BQ96MM6 686 aa20.65■□□□□ 0.9
PNKP-220ENST00000627232 CDX2Q99626 313 aaPredicted RBP20.65■□□□□ 0.9
PNKP-220ENST00000627232 UCK2Q9BZX2 261 aa20.65■□□□□ 0.9
PNKP-220ENST00000627232 CCDC90BQ9GZT6 254 aa20.65■□□□□ 0.9
PNKP-220ENST00000627232 MIR1-1HGQ9H1L0 117 aa20.65■□□□□ 0.9
PNKP-220ENST00000627232 TBC1D17Q9HA65 648 aa20.65■□□□□ 0.9
PNKP-220ENST00000627232 SLC13A4Q9UKG4 626 aa20.65■□□□□ 0.9
PNKP-220ENST00000627232 TP53BP1Q12888 1972 aaPredicted RBP20.65■□□□□ 0.9
PNKP-220ENST00000627232 ZAR1LA6NP61 321 aa20.64■□□□□ 0.9
PNKP-220ENST00000627232 ZNF99A8MXY4 864 aaPredicted RBP20.64■□□□□ 0.9
PNKP-220ENST00000627232 H3BMQ9 156 aa20.64■□□□□ 0.9
PNKP-220ENST00000627232 HCRTR1O43613 425 aa20.64■□□□□ 0.9
PNKP-220ENST00000627232 MPZL2O60487 215 aa20.64■□□□□ 0.9
PNKP-220ENST00000627232 OSMP13725 252 aa20.64■□□□□ 0.9
PNKP-220ENST00000627232 EMX1Q04741 257 aaPredicted RBP20.64■□□□□ 0.9
PNKP-220ENST00000627232 NDUFA9Q16795 377 aa20.64■□□□□ 0.9
PNKP-220ENST00000627232 OR6T1Q8NGN1 323 aa20.64■□□□□ 0.9
PNKP-220ENST00000627232 FAR1Q8WVX9 515 aa20.64■□□□□ 0.9
PNKP-220ENST00000627232 CDS1Q92903 461 aa20.64■□□□□ 0.9
PNKP-220ENST00000627232 COG8Q96MW5 612 aa20.64■□□□□ 0.9
PNKP-220ENST00000627232 SIGLEC11Q96RL6 698 aa20.64■□□□□ 0.9
PNKP-220ENST00000627232 PIGUQ9H490 435 aa20.64■□□□□ 0.9
PNKP-220ENST00000627232 MTHFD2LQ9H903 347 aaPredicted RBP20.64■□□□□ 0.9
PNKP-220ENST00000627232 STARD5Q9NSY2 213 aa20.64■□□□□ 0.9
PNKP-220ENST00000627232 IFT52Q9Y366 437 aa20.64■□□□□ 0.9
PNKP-220ENST00000627232 PCDHGA10Q9Y5H3 936 aa20.64■□□□□ 0.9
PNKP-220ENST00000627232 XIRP2A4UGR9 3374 aa20.64■□□□□ 0.89
PNKP-220ENST00000627232 BLACEA4D250 179 aa20.63■□□□□ 0.89
PNKP-220ENST00000627232 SGK494L7N484 410 aa20.63■□□□□ 0.89
PNKP-220ENST00000627232 OR10H3O60404 316 aa20.63■□□□□ 0.89
PNKP-220ENST00000627232 LDB3O75112 727 aa20.63■□□□□ 0.89
PNKP-220ENST00000627232 ACP2P11117 423 aa20.63■□□□□ 0.89
PNKP-220ENST00000627232 POU2F1P14859 743 aa20.63■□□□□ 0.89
PNKP-220ENST00000627232 GABRB1P18505 474 aa20.63■□□□□ 0.89
PNKP-220ENST00000627232 PDX1P52945 283 aa20.63■□□□□ 0.89
PNKP-220ENST00000627232 CDC42P60953 191 aa20.63■□□□□ 0.89
PNKP-220ENST00000627232 ILKQ13418 452 aa20.63■□□□□ 0.89
PNKP-220ENST00000627232 PIN1Q13526 163 aaPredicted RBP20.63■□□□□ 0.89
PNKP-220ENST00000627232 PTGES3Q15185 160 aaKnown RBP20.63■□□□□ 0.89
PNKP-220ENST00000627232 SMN1Q16637 294 aaKnown RBP20.63■□□□□ 0.89
PNKP-220ENST00000627232 DEFB110Q30KQ9 67 aa20.63■□□□□ 0.89
PNKP-220ENST00000627232 PGBD2Q6P3X8 592 aa20.63■□□□□ 0.89
PNKP-220ENST00000627232 FRRS1Q6ZNA5 592 aa20.63■□□□□ 0.89
PNKP-220ENST00000627232 FKBP10Q96AY3 582 aa20.63■□□□□ 0.89
PNKP-220ENST00000627232 ANKRD9Q96BM1 317 aaPredicted RBP20.63■□□□□ 0.89
PNKP-220ENST00000627232 ZNF285Q96NJ3 590 aa20.63■□□□□ 0.89
PNKP-220ENST00000627232 MAP3K3Q99759 626 aa20.63■□□□□ 0.89
PNKP-220ENST00000627232 CHRNA10Q9GZZ6 450 aa20.63■□□□□ 0.89
PNKP-220ENST00000627232 RAB33BQ9H082 229 aa20.63■□□□□ 0.89
PNKP-220ENST00000627232 CACYBPQ9HB71 228 aaKnown RBP20.63■□□□□ 0.89
PNKP-220ENST00000627232 KLHL28Q9NXS3 571 aa20.63■□□□□ 0.89
PNKP-220ENST00000627232 ZNF226Q9NYT6 803 aa20.63■□□□□ 0.89
PNKP-220ENST00000627232 REV1Q9UBZ9 1251 aa20.63■□□□□ 0.89
PNKP-220ENST00000627232 THADAQ6YHU6 1953 aa20.63■□□□□ 0.89
PNKP-220ENST00000627232 CHST10O43529 356 aa20.63■□□□□ 0.89
PNKP-220ENST00000627232 RDH16O75452 317 aa20.63■□□□□ 0.89
PNKP-220ENST00000627232 MT-ND2P03891 347 aa20.63■□□□□ 0.89
PNKP-220ENST00000627232 FOSL2P15408 326 aa20.63■□□□□ 0.89
PNKP-220ENST00000627232 NT5EP21589 574 aa20.63■□□□□ 0.89
PNKP-220ENST00000627232 CHMP24386 653 aa20.63■□□□□ 0.89
PNKP-220ENST00000627232 EPHA4P54764 986 aa20.63■□□□□ 0.89
PNKP-220ENST00000627232 ID2Q02363 134 aa20.63■□□□□ 0.89
PNKP-220ENST00000627232 PRICKLE4Q2TBC4 344 aa20.63■□□□□ 0.89
PNKP-220ENST00000627232 TRMT12Q53H54 448 aaKnown RBP20.63■□□□□ 0.89
PNKP-220ENST00000627232 CD300LDQ6UXZ3 194 aa20.63■□□□□ 0.89
PNKP-220ENST00000627232 OR9A4Q8NGU2 314 aa20.63■□□□□ 0.89
PNKP-220ENST00000627232 OR52P1PQ8NH57 321 aa20.63■□□□□ 0.89
PNKP-220ENST00000627232 SLC7A13Q8TCU3 470 aa20.63■□□□□ 0.89
PNKP-220ENST00000627232 ADAMTS18Q8TE60 1221 aa20.63■□□□□ 0.89
PNKP-220ENST00000627232 RAB2BQ8WUD1 216 aa20.63■□□□□ 0.89
PNKP-220ENST00000627232 SLC9A6Q92581 669 aa20.63■□□□□ 0.89
PNKP-220ENST00000627232 STACQ99469 402 aa20.63■□□□□ 0.89
PNKP-220ENST00000627232 SLC24A3Q9HC58 644 aa20.63■□□□□ 0.89
PNKP-220ENST00000627232 IMPAD1Q9NX62 359 aa20.63■□□□□ 0.89
PNKP-220ENST00000627232 MAT2BQ9NZL9 334 aa20.63■□□□□ 0.89
PNKP-220ENST00000627232 PSORS1C1Q9UIG5 152 aa20.63■□□□□ 0.89
PNKP-220ENST00000627232 SATB2Q9UPW6 733 aa20.63■□□□□ 0.89
PNKP-220ENST00000627232 CLCA2Q9UQC9 943 aa20.63■□□□□ 0.89
PNKP-220ENST00000627232 EML5Q05BV3 1969 aa20.62■□□□□ 0.89
PNKP-220ENST00000627232 FAM227AF5H4B4 570 aa20.62■□□□□ 0.89
PNKP-220ENST00000627232 ZIC2O95409 532 aaPredicted RBP20.62■□□□□ 0.89
PNKP-220ENST00000627232 ALOX5P09917 674 aa20.62■□□□□ 0.89
PNKP-220ENST00000627232 SLC35E2P0CK97 266 aa20.62■□□□□ 0.89
PNKP-220ENST00000627232 GABRA4P48169 554 aa20.62■□□□□ 0.89
PNKP-220ENST00000627232 IDH2P48735 452 aaKnown RBP20.62■□□□□ 0.89
PNKP-220ENST00000627232 ALDH6A1Q02252 535 aaKnown RBP20.62■□□□□ 0.89
PNKP-220ENST00000627232 MGAT2Q10469 447 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms