RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 PPP3R2Q96LZ3 170 aa20.51■□□□□ 0.87
SF1-220ENST00000626028 VSTM2LQ96N03 204 aa20.51■□□□□ 0.87
SF1-220ENST00000626028 EXO1Q9UQ84 846 aaKnown RBP20.51■□□□□ 0.87
SF1-220ENST00000626028 PCDHGB3Q9Y5G1 929 aa20.51■□□□□ 0.87
SF1-220ENST00000626028 OR6C70A6NIJ9 312 aa20.5■□□□□ 0.87
SF1-220ENST00000626028 LRRC3CA6NJW4 275 aa20.5■□□□□ 0.87
SF1-220ENST00000626028 TTC36A6NLP5 189 aa20.5■□□□□ 0.87
SF1-220ENST00000626028 TMEM114B3SHH9 223 aa20.5■□□□□ 0.87
SF1-220ENST00000626028 ERN1O75460 977 aaKnown RBP20.5■□□□□ 0.87
SF1-220ENST00000626028 PDE9AO76083 593 aa20.5■□□□□ 0.87
SF1-220ENST00000626028 ZWINTO95229 277 aa20.5■□□□□ 0.87
SF1-220ENST00000626028 MAPK1P28482 360 aa20.5■□□□□ 0.87
SF1-220ENST00000626028 SERPINB4P48594 390 aa20.5■□□□□ 0.87
SF1-220ENST00000626028 NCBP2P52298 156 aaKnown RBP eCLIP20.5■□□□□ 0.872e-7■□□□□ 9.3
SF1-220ENST00000626028 ADORA2A-AS1P86434 159 aa20.5■□□□□ 0.87
SF1-220ENST00000626028 PLCXD2Q0VAA5 305 aa20.5■□□□□ 0.87
SF1-220ENST00000626028 RFTN2Q52LD8 501 aaPredicted RBP20.5■□□□□ 0.87
SF1-220ENST00000626028 XKR7Q5GH72 579 aa20.5■□□□□ 0.87
SF1-220ENST00000626028 CEP85LQ5SZL2 805 aa20.5■□□□□ 0.87
SF1-220ENST00000626028 SLC30A6Q6NXT4 461 aa20.5■□□□□ 0.87
SF1-220ENST00000626028 TMEM64Q6YI46 380 aa20.5■□□□□ 0.87
SF1-220ENST00000626028 CD163Q86VB7 1156 aa20.5■□□□□ 0.87
SF1-220ENST00000626028 NUDCD3Q8IVD9 361 aa20.5■□□□□ 0.87
SF1-220ENST00000626028 DDIASQ8IXT1 998 aa20.5■□□□□ 0.87
SF1-220ENST00000626028 KAT2AQ92830 837 aa20.5■□□□□ 0.87
SF1-220ENST00000626028 RILPQ96NA2 401 aa20.5■□□□□ 0.87
SF1-220ENST00000626028 ZIM3Q96PE6 472 aa20.5■□□□□ 0.87
SF1-220ENST00000626028 LDAHQ9H6V9 325 aa20.5■□□□□ 0.87
SF1-220ENST00000626028 CHST11Q9NPF2 352 aa20.5■□□□□ 0.87
SF1-220ENST00000626028 C19orf53Q9UNZ5 99 aaPredicted RBP20.5■□□□□ 0.87
SF1-220ENST00000626028 FIS1Q9Y3D6 152 aa20.5■□□□□ 0.87
SF1-220ENST00000626028 PTGDR2Q9Y5Y4 395 aa20.5■□□□□ 0.87
SF1-220ENST00000626028 ATP6AP2A0A1C7CYW4 349 aa20.49■□□□□ 0.87
SF1-220ENST00000626028 ADAM10O14672 748 aa20.49■□□□□ 0.87
SF1-220ENST00000626028 ERLIN1O75477 346 aa20.49■□□□□ 0.87
SF1-220ENST00000626028 ATP6AP2O75787 350 aa20.49■□□□□ 0.87
SF1-220ENST00000626028 HOXD4P09016 255 aaPredicted RBP20.49■□□□□ 0.87
SF1-220ENST00000626028 CT45A8P0DMV1 189 aa20.49■□□□□ 0.87
SF1-220ENST00000626028 CT45A9P0DMV2 189 aa20.49■□□□□ 0.87
SF1-220ENST00000626028 SDC1P18827 310 aa20.49■□□□□ 0.87
SF1-220ENST00000626028 TACR1P25103 407 aa20.49■□□□□ 0.87
SF1-220ENST00000626028 RPL3P39023 403 aaKnown RBP20.49■□□□□ 0.87
SF1-220ENST00000626028 MAN2A2P49641 1150 aa20.49■□□□□ 0.87
SF1-220ENST00000626028 MRPS22P82650 360 aaKnown RBP20.49■□□□□ 0.87
SF1-220ENST00000626028 PDE7AQ13946 482 aa20.49■□□□□ 0.87
SF1-220ENST00000626028 CT45A2Q5DJT8 189 aa20.49■□□□□ 0.87
SF1-220ENST00000626028 ZCCHC23Q6ZST2 131 aa20.49■□□□□ 0.87
SF1-220ENST00000626028 R3HCC1LQ7Z5L2 792 aaKnown RBP20.49■□□□□ 0.87
SF1-220ENST00000626028 OR2L13Q8N349 312 aa20.49■□□□□ 0.87
SF1-220ENST00000626028 SIMC1Q8NDZ2 872 aa20.49■□□□□ 0.87
SF1-220ENST00000626028 OR7G2Q8NG99 324 aa20.49■□□□□ 0.87
SF1-220ENST00000626028 HGDQ93099 445 aa20.49■□□□□ 0.87
SF1-220ENST00000626028 DTNBP1Q96EV8 351 aa20.49■□□□□ 0.87
SF1-220ENST00000626028 SLC35A4Q96G79 324 aa20.49■□□□□ 0.87
SF1-220ENST00000626028 EGLN2Q96KS0 407 aa20.49■□□□□ 0.87
SF1-220ENST00000626028 AMDHD1Q96NU7 426 aa20.49■□□□□ 0.87
SF1-220ENST00000626028 REEP4Q9H6H4 257 aa20.49■□□□□ 0.87
SF1-220ENST00000626028 ITPR2Q14571 2701 aa20.48■□□□□ 0.87
SF1-220ENST00000626028 NBPF19A0A087WUL8 3843 aa20.48■□□□□ 0.87
SF1-220ENST00000626028 TRGV5A0A0B4J1U4 118 aa20.48■□□□□ 0.87
SF1-220ENST00000626028 FIGNL2A6NMB9 653 aa20.48■□□□□ 0.87
SF1-220ENST00000626028 PIP5K1BO14986 540 aa20.48■□□□□ 0.87
SF1-220ENST00000626028 PSMG1O95456 288 aa20.48■□□□□ 0.87
SF1-220ENST00000626028 JUNP05412 331 aaKnown RBP20.48■□□□□ 0.87
SF1-220ENST00000626028 DHRS4L1P0CG22 281 aa20.48■□□□□ 0.87
SF1-220ENST00000626028 GRK2P25098 689 aa20.48■□□□□ 0.87
SF1-220ENST00000626028 RPL38P63173 70 aaKnown RBP20.48■□□□□ 0.87
SF1-220ENST00000626028 EFR3AQ14156 821 aa20.48■□□□□ 0.87
SF1-220ENST00000626028 PRR22Q8IZ63 422 aa20.48■□□□□ 0.87
SF1-220ENST00000626028 ZFP28Q8NHY6 868 aa20.48■□□□□ 0.87
SF1-220ENST00000626028 PPP1R14CQ8TAE6 165 aa20.48■□□□□ 0.87
SF1-220ENST00000626028 TMCO6Q96DC7 493 aa20.48■□□□□ 0.87
SF1-220ENST00000626028 ZBED6CLQ96FA7 236 aaPredicted RBP20.48■□□□□ 0.87
SF1-220ENST00000626028 COL21A1Q96P44 957 aa20.48■□□□□ 0.87
SF1-220ENST00000626028 UBQLN3Q9H347 655 aa20.48■□□□□ 0.87
SF1-220ENST00000626028 GLIPR2Q9H4G4 154 aa20.48■□□□□ 0.87
SF1-220ENST00000626028 METTL7AQ9H8H3 244 aa20.48■□□□□ 0.87
SF1-220ENST00000626028 FOLH1BQ9HBA9 442 aa20.48■□□□□ 0.87
SF1-220ENST00000626028 ACSS1Q9NUB1 689 aaPredicted RBP20.48■□□□□ 0.87
SF1-220ENST00000626028 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.48■□□□□ 0.87
SF1-220ENST00000626028 NUP214P35658 2090 aaPredicted RBP20.48■□□□□ 0.87
SF1-220ENST00000626028 TMEM233B4DJY2 109 aa20.47■□□□□ 0.87
SF1-220ENST00000626028 SERPINE1P05121 402 aa20.47■□□□□ 0.87
SF1-220ENST00000626028 RFPL3SP0C7P2 107 aa20.47■□□□□ 0.87
SF1-220ENST00000626028 KRT20P35900 424 aa20.47■□□□□ 0.87
SF1-220ENST00000626028 DCTP40126 519 aa20.47■□□□□ 0.87
SF1-220ENST00000626028 FRKP42685 505 aaPredicted RBP20.47■□□□□ 0.87
SF1-220ENST00000626028 MASP1P48740 699 aa20.47■□□□□ 0.87
SF1-220ENST00000626028 PNLIPRP2P54317 469 aa20.47■□□□□ 0.87
SF1-220ENST00000626028 NNATQ16517 81 aa20.47■□□□□ 0.87
SF1-220ENST00000626028 GXYLT1Q4G148 440 aa20.47■□□□□ 0.87
SF1-220ENST00000626028 ATP6AP1LQ52LC2 224 aa20.47■□□□□ 0.87
SF1-220ENST00000626028 ACAD11Q709F0 780 aa20.47■□□□□ 0.87
SF1-220ENST00000626028 NATD1Q8N6N6 113 aa20.47■□□□□ 0.87
SF1-220ENST00000626028 NEIL3Q8TAT5 605 aa20.47■□□□□ 0.87
SF1-220ENST00000626028 PPCDCQ96CD2 204 aa20.47■□□□□ 0.87
SF1-220ENST00000626028 ELP4Q96EB1 424 aa20.47■□□□□ 0.87
SF1-220ENST00000626028 JSRP1Q96MG2 331 aaPredicted RBP20.47■□□□□ 0.87
SF1-220ENST00000626028 DDX18Q9NVP1 670 aaKnown RBP20.47■□□□□ 0.87
SF1-220ENST00000626028 COQ3Q9NZJ6 369 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms