RNA–Protein interactions for RNA: ENST00000625672.2

NRXN1-222, Transcript of neurexin 1, human

TSL 1 (best) BASIC

Gene NRXN1, Length 8,113 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-222	ENST00000625672	ZNF33B	Q06732	778 aa		13.21	□□□□□ -0.3
NRXN1-222	ENST00000625672	FAM46A	Q96IP4	442 aa	Known RBP	13.21	□□□□□ -0.3
NRXN1-222	ENST00000625672	LMF1	Q96S06	567 aa		13.21	□□□□□ -0.3
NRXN1-222	ENST00000625672	PIP5K1A	Q99755	562 aa		13.21	□□□□□ -0.3
NRXN1-222	ENST00000625672	LOC105369274	A0A096LPK9	316 aa		13.21	□□□□□ -0.3
NRXN1-222	ENST00000625672	AK1	P00568	194 aa		13.21	□□□□□ -0.3
NRXN1-222	ENST00000625672	APOF	Q13790	326 aa		13.21	□□□□□ -0.3
NRXN1-222	ENST00000625672	UGT3A2	Q3SY77	523 aa		13.21	□□□□□ -0.3
NRXN1-222	ENST00000625672	C10orf62	Q5T681	223 aa	Predicted RBP	13.21	□□□□□ -0.3
NRXN1-222	ENST00000625672	OR4N4	Q8N0Y3	316 aa		13.21	□□□□□ -0.3
NRXN1-222	ENST00000625672	OR5L1	Q8NGL2	311 aa		13.21	□□□□□ -0.3
NRXN1-222	ENST00000625672	FAM71F1	Q96KD3	344 aa	Predicted RBP	13.21	□□□□□ -0.3
NRXN1-222	ENST00000625672	HSPB11	Q9Y547	144 aa		13.21	□□□□□ -0.3
NRXN1-222	ENST00000625672		A6NHS1	94 aa		13.2	□□□□□ -0.3
NRXN1-222	ENST00000625672	KCNE1	P15382	129 aa		13.2	□□□□□ -0.3
NRXN1-222	ENST00000625672	RPS3	P23396	243 aa	Known RBP eCLIP	13.2	□□□□□ -0.3
NRXN1-222	ENST00000625672	NKX3-2	P78367	333 aa		13.2	□□□□□ -0.3
NRXN1-222	ENST00000625672	C2orf76	Q3KRA6	126 aa		13.2	□□□□□ -0.3
NRXN1-222	ENST00000625672	S100A7A	Q86SG5	101 aa		13.2	□□□□□ -0.3
NRXN1-222	ENST00000625672	OR9I1	Q8NGQ6	314 aa		13.2	□□□□□ -0.3
NRXN1-222	ENST00000625672	XPNPEP1	Q9NQW7	623 aa		13.2	□□□□□ -0.3
NRXN1-222	ENST00000625672	CREBZF	Q9NS37	354 aa		13.2	□□□□□ -0.3
NRXN1-222	ENST00000625672	PLEKHJ1	Q9NW61	149 aa		13.2	□□□□□ -0.3
NRXN1-222	ENST00000625672	FMO6P	O60774	539 aa		13.2	□□□□□ -0.3
NRXN1-222	ENST00000625672	KNG1	P01042	644 aa		13.2	□□□□□ -0.3
NRXN1-222	ENST00000625672	CPOX	P36551	454 aa		13.2	□□□□□ -0.3
NRXN1-222	ENST00000625672	PFDN5	Q99471	154 aa		13.2	□□□□□ -0.3
NRXN1-222	ENST00000625672	WDR6	Q9NNW5	1121 aa	Known RBP	13.2	□□□□□ -0.3
NRXN1-222	ENST00000625672	KCMF1	Q9P0J7	381 aa		13.2	□□□□□ -0.3
NRXN1-222	ENST00000625672		A8MV72	311 aa	Predicted RBP	13.2	□□□□□ -0.3
NRXN1-222	ENST00000625672		H7C2Y5	167 aa		13.2	□□□□□ -0.3
NRXN1-222	ENST00000625672	KIAA0355	O15063	1070 aa		13.2	□□□□□ -0.3
NRXN1-222	ENST00000625672	HEXA	P06865	529 aa		13.2	□□□□□ -0.3
NRXN1-222	ENST00000625672	ERP29	P30040	261 aa	Known RBP	13.2	□□□□□ -0.3
NRXN1-222	ENST00000625672	PYCR1	P32322	319 aa		13.2	□□□□□ -0.3
NRXN1-222	ENST00000625672	KLB	Q86Z14	1044 aa		13.2	□□□□□ -0.3
NRXN1-222	ENST00000625672	GAB3	Q8WWW8	586 aa		13.2	□□□□□ -0.3
NRXN1-222	ENST00000625672	MINDY3	Q9H8M7	445 aa		13.2	□□□□□ -0.3
NRXN1-222	ENST00000625672	FBRS	Q9HAH7	460 aa		13.2	□□□□□ -0.3
NRXN1-222	ENST00000625672	KLHL42	Q9P2K6	505 aa		13.2	□□□□□ -0.3
NRXN1-222	ENST00000625672	PISD	Q9UG56	409 aa		13.2	□□□□□ -0.3
NRXN1-222	ENST00000625672	NPC1	O15118	1278 aa		13.2	□□□□□ -0.3
NRXN1-222	ENST00000625672	CLEC3B	P05452	202 aa		13.2	□□□□□ -0.3
NRXN1-222	ENST00000625672	HTD2	P86397	168 aa		13.2	□□□□□ -0.3
NRXN1-222	ENST00000625672	CDHR3	Q6ZTQ4	885 aa		13.2	□□□□□ -0.3
NRXN1-222	ENST00000625672	OR2T4	Q8NH00	348 aa		13.2	□□□□□ -0.3
NRXN1-222	ENST00000625672	TAAR8	Q969N4	342 aa		13.2	□□□□□ -0.3
NRXN1-222	ENST00000625672	ZNF578	Q96N58	590 aa	Predicted RBP	13.2	□□□□□ -0.3
NRXN1-222	ENST00000625672	RDH12	Q96NR8	316 aa		13.2	□□□□□ -0.3
NRXN1-222	ENST00000625672	PTTG2	Q9NZH5	202 aa		13.2	□□□□□ -0.3
NRXN1-222	ENST00000625672	ZNF225	Q9UK10	706 aa		13.2	□□□□□ -0.3
NRXN1-222	ENST00000625672	PIP5K1C	O60331	668 aa		13.2	□□□□□ -0.3
NRXN1-222	ENST00000625672	NPPA	P01160	153 aa		13.2	□□□□□ -0.3
NRXN1-222	ENST00000625672	KIF18B	Q86Y91	864 aa		13.2	□□□□□ -0.3
NRXN1-222	ENST00000625672	TSPEAR	Q8WU66	669 aa		13.2	□□□□□ -0.3
NRXN1-222	ENST00000625672	FRZB	Q92765	325 aa		13.2	□□□□□ -0.3
NRXN1-222	ENST00000625672	SMO	Q99835	787 aa		13.2	□□□□□ -0.3
NRXN1-222	ENST00000625672	FETUB	Q9UGM5	382 aa		13.2	□□□□□ -0.3
NRXN1-222	ENST00000625672	TMEM184B	Q9Y519	407 aa	Predicted RBP	13.2	□□□□□ -0.3
NRXN1-222	ENST00000625672	C2orf78	A6NCI8	922 aa		13.2	□□□□□ -0.3
NRXN1-222	ENST00000625672	UCHL1	P09936	223 aa		13.2	□□□□□ -0.3
NRXN1-222	ENST00000625672	IQCF3	P0C7M6	154 aa		13.2	□□□□□ -0.3
NRXN1-222	ENST00000625672	PRKX	P51817	358 aa		13.2	□□□□□ -0.3
NRXN1-222	ENST00000625672	ZNF678	Q5SXM1	525 aa		13.2	□□□□□ -0.3
NRXN1-222	ENST00000625672	NXPE4	Q6UWF7	544 aa		13.2	□□□□□ -0.3
NRXN1-222	ENST00000625672	C2CD4A	Q8NCU7	369 aa	Predicted RBP	13.2	□□□□□ -0.3
NRXN1-222	ENST00000625672	IL1F10	Q8WWZ1	152 aa		13.2	□□□□□ -0.3
NRXN1-222	ENST00000625672	ST6GALNAC5	Q9BVH7	336 aa		13.2	□□□□□ -0.3
NRXN1-222	ENST00000625672	ZNF446	Q9NWS9	450 aa		13.2	□□□□□ -0.3
NRXN1-222	ENST00000625672		A8MXE2	369 aa		13.19	□□□□□ -0.3
NRXN1-222	ENST00000625672	CD46	P15529	392 aa		13.19	□□□□□ -0.3
NRXN1-222	ENST00000625672	HTR2A	P28223	471 aa		13.19	□□□□□ -0.3
NRXN1-222	ENST00000625672	OR14K1	Q8NGZ2	314 aa		13.19	□□□□□ -0.3
NRXN1-222	ENST00000625672	RPH3AL	Q9UNE2	315 aa		13.19	□□□□□ -0.3
NRXN1-222	ENST00000625672	CBX7	O95931	251 aa		13.19	□□□□□ -0.3
NRXN1-222	ENST00000625672	EIF2B1	Q14232	305 aa	Known RBP	13.19	□□□□□ -0.3
NRXN1-222	ENST00000625672	GRB7	Q14451	532 aa		13.19	□□□□□ -0.3
NRXN1-222	ENST00000625672	PAFAH1B3	Q15102	231 aa	Known RBP	13.19	□□□□□ -0.3
NRXN1-222	ENST00000625672	KRBOX4	Q5JUW0	171 aa		13.19	□□□□□ -0.3
NRXN1-222	ENST00000625672	C14orf80	Q86SX3	495 aa		13.19	□□□□□ -0.3
NRXN1-222	ENST00000625672	OR51Q1	Q8NH59	317 aa		13.19	□□□□□ -0.3
NRXN1-222	ENST00000625672	TOMM40L	Q969M1	308 aa		13.19	□□□□□ -0.3
NRXN1-222	ENST00000625672	POT1	Q9NUX5	634 aa		13.19	□□□□□ -0.3
NRXN1-222	ENST00000625672	KLHL9	Q9P2J3	617 aa		13.19	□□□□□ -0.3
NRXN1-222	ENST00000625672	FAM230A	A0A1W2PPH8	454 aa		13.19	□□□□□ -0.3
NRXN1-222	ENST00000625672	SULT2B1	O00204	365 aa		13.19	□□□□□ -0.3
NRXN1-222	ENST00000625672	PMM2	O15305	246 aa		13.19	□□□□□ -0.3
NRXN1-222	ENST00000625672	NUDT21	O43809	227 aa	Known RBP	13.19	□□□□□ -0.3
NRXN1-222	ENST00000625672	DRD1	P21728	446 aa		13.19	□□□□□ -0.3
NRXN1-222	ENST00000625672	UPP1	Q16831	310 aa		13.19	□□□□□ -0.3
NRXN1-222	ENST00000625672	SLC35G1	Q2M3R5	365 aa		13.19	□□□□□ -0.3
NRXN1-222	ENST00000625672	OR4K13	Q8NH42	304 aa		13.19	□□□□□ -0.3
NRXN1-222	ENST00000625672	C16orf78	Q8WTQ4	265 aa		13.19	□□□□□ -0.3
NRXN1-222	ENST00000625672	SENP5	Q96HI0	755 aa	Predicted RBP	13.19	□□□□□ -0.3
NRXN1-222	ENST00000625672	TEPSIN	Q96N21	525 aa		13.19	□□□□□ -0.3
NRXN1-222	ENST00000625672	DUSP23	Q9BVJ7	150 aa		13.19	□□□□□ -0.3
NRXN1-222	ENST00000625672	C19orf12	Q9NSK7	152 aa		13.19	□□□□□ -0.3
NRXN1-222	ENST00000625672	ERVK13-1	Q9NX77	482 aa		13.19	□□□□□ -0.3
NRXN1-222	ENST00000625672	EMC3	Q9P0I2	261 aa		13.19	□□□□□ -0.3
NRXN1-222	ENST00000625672	SLC22A31	A6NKX4	558 aa		13.19	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 42 ms