RNA–Protein interactions for RNA: ENST00000624403.1

ATRX-216, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-216ENST00000624403 MAP4K2Q12851 820 aa9.64□□□□□ -0.87
ATRX-216ENST00000624403 DUSP8Q13202 625 aa9.64□□□□□ -0.87
ATRX-216ENST00000624403 GNA13Q14344 377 aa9.64□□□□□ -0.87
ATRX-216ENST00000624403 EXOSC7Q15024 291 aaKnown RBP9.64□□□□□ -0.87
ATRX-216ENST00000624403 PDK3Q15120 406 aa9.64□□□□□ -0.87
ATRX-216ENST00000624403 DUSP7Q16829 419 aa9.64□□□□□ -0.87
ATRX-216ENST00000624403 GPAT3Q53EU6 434 aa9.64□□□□□ -0.87
ATRX-216ENST00000624403 NHSL2Q5HYW2 709 aa9.64□□□□□ -0.87
ATRX-216ENST00000624403 EXOSC6Q5RKV6 272 aaKnown RBP9.64□□□□□ -0.87
ATRX-216ENST00000624403 ATAD3BQ5T9A4 648 aa9.64□□□□□ -0.87
ATRX-216ENST00000624403 PRAMEF8Q5VWM4 474 aa9.64□□□□□ -0.87
ATRX-216ENST00000624403 PRAMEF7Q5VXH5 474 aa9.64□□□□□ -0.87
ATRX-216ENST00000624403 ANKRD34AQ69YU3 496 aa9.64□□□□□ -0.87
ATRX-216ENST00000624403 HEPHL1Q6MZM0 1159 aa9.64□□□□□ -0.87
ATRX-216ENST00000624403 SHQ1Q6PI26 577 aaKnown RBP9.64□□□□□ -0.87
ATRX-216ENST00000624403 ZC3H14Q6PJT7 736 aaKnown RBP9.64□□□□□ -0.87
ATRX-216ENST00000624403 KRT73Q86Y46 540 aa9.64□□□□□ -0.87
ATRX-216ENST00000624403 MARVELD2Q8N4S9 558 aa9.64□□□□□ -0.87
ATRX-216ENST00000624403 SLC16A11Q8NCK7 471 aa9.64□□□□□ -0.87
ATRX-216ENST00000624403 ADAMTS15Q8TE58 950 aa9.64□□□□□ -0.87
ATRX-216ENST00000624403 CDS1Q92903 461 aa9.64□□□□□ -0.87
ATRX-216ENST00000624403 SDCCAG3Q96C92 435 aa9.64□□□□□ -0.87
ATRX-216ENST00000624403 CTHRC1Q96CG8 243 aa9.64□□□□□ -0.87
ATRX-216ENST00000624403 MVB12AQ96EY5 273 aa9.64□□□□□ -0.87
ATRX-216ENST00000624403 NR1H4Q96RI1 486 aaPredicted RBP9.64□□□□□ -0.87
ATRX-216ENST00000624403 ZNF607Q96SK3 696 aa9.64□□□□□ -0.87
ATRX-216ENST00000624403 BARD1Q99728 777 aaKnown RBP9.64□□□□□ -0.87
ATRX-216ENST00000624403 DPYSL5Q9BPU6 564 aa9.64□□□□□ -0.87
ATRX-216ENST00000624403 YIPF2Q9BWQ6 316 aa9.64□□□□□ -0.87
ATRX-216ENST00000624403 ALOXE3Q9BYJ1 711 aa9.64□□□□□ -0.87
ATRX-216ENST00000624403 SMURF2Q9HAU4 748 aa9.64□□□□□ -0.87
ATRX-216ENST00000624403 FANCEQ9HB96 536 aa9.64□□□□□ -0.87
ATRX-216ENST00000624403 ADAP2Q9NPF8 381 aa9.64□□□□□ -0.87
ATRX-216ENST00000624403 THSD1Q9NS62 852 aa9.64□□□□□ -0.87
ATRX-216ENST00000624403 LANCL2Q9NS86 450 aa9.64□□□□□ -0.87
ATRX-216ENST00000624403 SMPD3Q9NY59 655 aaPredicted RBP9.64□□□□□ -0.87
ATRX-216ENST00000624403 NDUFAF4Q9P032 175 aa9.64□□□□□ -0.87
ATRX-216ENST00000624403 DHCR7Q9UBM7 475 aaKnown RBP9.64□□□□□ -0.87
ATRX-216ENST00000624403 CDC14AQ9UNH5 594 aa9.64□□□□□ -0.87
ATRX-216ENST00000624403 LIPT1Q9Y234 373 aa9.64□□□□□ -0.87
ATRX-216ENST00000624403 CLDN16Q9Y5I7 305 aa9.64□□□□□ -0.87
ATRX-216ENST00000624403 GPC6Q9Y625 555 aaPredicted RBP9.64□□□□□ -0.87
ATRX-216ENST00000624403 R4GN57 208 aa9.64□□□□□ -0.87
ATRX-216ENST00000624403 U3KQV3 271 aa9.64□□□□□ -0.87
ATRX-216ENST00000624403 GOLGA4Q13439 2230 aaKnown RBP9.64□□□□□ -0.87
ATRX-216ENST00000624403 ADAMTS9Q9P2N4 1935 aa9.64□□□□□ -0.87
ATRX-216ENST00000624403 FAM86C2PA6NEL3 165 aa9.63□□□□□ -0.87
ATRX-216ENST00000624403 DUXAA6NLW8 204 aa9.63□□□□□ -0.87
ATRX-216ENST00000624403 EIF4E1BA6NMX2 242 aaKnown RBP9.63□□□□□ -0.87
ATRX-216ENST00000624403 DPM1O60762 260 aa9.63□□□□□ -0.87
ATRX-216ENST00000624403 SERPINB7O75635 380 aa9.63□□□□□ -0.87
ATRX-216ENST00000624403 BMP10O95393 424 aa9.63□□□□□ -0.87
ATRX-216ENST00000624403 H6PDO95479 791 aa9.63□□□□□ -0.87
ATRX-216ENST00000624403 CBX7O95931 251 aa9.63□□□□□ -0.87
ATRX-216ENST00000624403 AGR2O95994 175 aa9.63□□□□□ -0.87
ATRX-216ENST00000624403 ALPLP05186 524 aa9.63□□□□□ -0.87
ATRX-216ENST00000624403 FESP07332 822 aa9.63□□□□□ -0.87
ATRX-216ENST00000624403 ALOX5P09917 674 aa9.63□□□□□ -0.87
ATRX-216ENST00000624403 UBTFL6P0CB48 400 aaPredicted RBP9.63□□□□□ -0.87
ATRX-216ENST00000624403 ZNF883P0CG24 379 aa9.63□□□□□ -0.87
ATRX-216ENST00000624403 ETS2P15036 469 aa9.63□□□□□ -0.87
ATRX-216ENST00000624403 S1PR1P21453 382 aa9.63□□□□□ -0.87
ATRX-216ENST00000624403 FPR1P21462 350 aa9.63□□□□□ -0.87
ATRX-216ENST00000624403 FBLP22087 321 aaKnown RBP9.63□□□□□ -0.87
ATRX-216ENST00000624403 PRKACGP22612 351 aa9.63□□□□□ -0.87
ATRX-216ENST00000624403 DNAJA1P31689 397 aaKnown RBP9.63□□□□□ -0.87
ATRX-216ENST00000624403 STT3AP46977 705 aa9.63□□□□□ -0.87
ATRX-216ENST00000624403 KCNJ5P48544 419 aa9.63□□□□□ -0.87
ATRX-216ENST00000624403 MAPK10P53779 464 aa9.63□□□□□ -0.87
ATRX-216ENST00000624403 HSD17B7P56937 341 aa9.63□□□□□ -0.87
ATRX-216ENST00000624403 PPP2R2BQ00005 443 aa9.63□□□□□ -0.87
ATRX-216ENST00000624403 ACY1Q03154 408 aa9.63□□□□□ -0.87
ATRX-216ENST00000624403 CHRNEQ04844 493 aa9.63□□□□□ -0.87
ATRX-216ENST00000624403 GK3PQ14409 553 aa9.63□□□□□ -0.87
ATRX-216ENST00000624403 PUM1Q14671 1186 aaKnown RBP eCLIP9.63□□□□□ -0.87
ATRX-216ENST00000624403 DUSP5Q16690 384 aa9.63□□□□□ -0.87
ATRX-216ENST00000624403 C1orf189Q5VU69 101 aa9.63□□□□□ -0.87
ATRX-216ENST00000624403 YOD1Q5VVQ6 348 aaPredicted RBP9.63□□□□□ -0.87
ATRX-216ENST00000624403 C16orf62Q7Z3J2 963 aa9.63□□□□□ -0.87
ATRX-216ENST00000624403 HMGN2P46Q86SG4 172 aa9.63□□□□□ -0.87
ATRX-216ENST00000624403 HIPK1Q86Z02 1210 aa9.63□□□□□ -0.87
ATRX-216ENST00000624403 CHERPQ8IWX8 916 aaKnown RBP9.63□□□□□ -0.87
ATRX-216ENST00000624403 ST13P4Q8IZP2 240 aaPredicted RBP9.63□□□□□ -0.87
ATRX-216ENST00000624403 RCBTB1Q8NDN9 531 aa9.63□□□□□ -0.87
ATRX-216ENST00000624403 OR52R1Q8NGF1 315 aa9.63□□□□□ -0.87
ATRX-216ENST00000624403 APOBEC4Q8WW27 367 aaKnown RBP9.63□□□□□ -0.87
ATRX-216ENST00000624403 SLC9A6Q92581 669 aa9.63□□□□□ -0.87
ATRX-216ENST00000624403 TFAP2CQ92754 450 aa9.63□□□□□ -0.87
ATRX-216ENST00000624403 PROX1Q92786 737 aa9.63□□□□□ -0.87
ATRX-216ENST00000624403 CNBD2Q96M20 576 aa9.63□□□□□ -0.87
ATRX-216ENST00000624403 DGAT2Q96PD7 388 aa9.63□□□□□ -0.87
ATRX-216ENST00000624403 TRNT1Q96Q11 434 aaKnown RBP9.63□□□□□ -0.87
ATRX-216ENST00000624403 ZNF300Q96RE9 604 aaPredicted RBP9.63□□□□□ -0.87
ATRX-216ENST00000624403 ZNF347Q96SE7 839 aa9.63□□□□□ -0.87
ATRX-216ENST00000624403 OSBPL10Q9BXB5 764 aa9.63□□□□□ -0.87
ATRX-216ENST00000624403 AMBRA1Q9C0C7 1298 aa9.63□□□□□ -0.87
ATRX-216ENST00000624403 GABARAPL1Q9H0R8 117 aa9.63□□□□□ -0.87
ATRX-216ENST00000624403 SLC38A1Q9H2H9 487 aa9.63□□□□□ -0.87
ATRX-216ENST00000624403 PIGUQ9H490 435 aa9.63□□□□□ -0.87
ATRX-216ENST00000624403 REEP1Q9H902 201 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms