RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 SMAD3P84022 425 aaKnown RBP13.3□□□□□ -0.28
LDB3-209ENST00000623056 HSF2Q03933 536 aa13.3□□□□□ -0.28
LDB3-209ENST00000623056 VASNQ6EMK4 673 aa13.3□□□□□ -0.28
LDB3-209ENST00000623056 FUT10Q6P4F1 479 aa13.3□□□□□ -0.28
LDB3-209ENST00000623056 IL20RBQ6UXL0 311 aa13.3□□□□□ -0.28
LDB3-209ENST00000623056 TAS1R1Q7RTX1 841 aa13.3□□□□□ -0.28
LDB3-209ENST00000623056 TECPR1Q7Z6L1 1165 aa13.3□□□□□ -0.28
LDB3-209ENST00000623056 BMPERQ8N8U9 685 aa13.3□□□□□ -0.28
LDB3-209ENST00000623056 DBF4BQ8NFT6 615 aa13.3□□□□□ -0.28
LDB3-209ENST00000623056 OR5M3Q8NGP4 307 aa13.3□□□□□ -0.28
LDB3-209ENST00000623056 CEP76Q8TAP6 659 aa13.3□□□□□ -0.28
LDB3-209ENST00000623056 HSD17B8Q92506 261 aa13.3□□□□□ -0.28
LDB3-209ENST00000623056 OTUB1Q96FW1 271 aaPredicted RBP13.3□□□□□ -0.28
LDB3-209ENST00000623056 RBP7Q96R05 134 aa13.3□□□□□ -0.28
LDB3-209ENST00000623056 FNDC11Q9BVV2 318 aa13.3□□□□□ -0.28
LDB3-209ENST00000623056 SORBS1Q9BX66 1292 aaKnown RBP13.3□□□□□ -0.28
LDB3-209ENST00000623056 SAP130Q9H0E3 1048 aa13.3□□□□□ -0.28
LDB3-209ENST00000623056 LIN7BQ9HAP6 207 aa13.3□□□□□ -0.28
LDB3-209ENST00000623056 SLAMF7Q9NQ25 335 aa13.3□□□□□ -0.28
LDB3-209ENST00000623056 HCSTQ9UBK5 93 aa13.3□□□□□ -0.28
LDB3-209ENST00000623056 CACNB4O00305 520 aaPredicted RBP13.3□□□□□ -0.28
LDB3-209ENST00000623056 TSPAN4O14817 238 aa13.3□□□□□ -0.28
LDB3-209ENST00000623056 NPC1O15118 1278 aa13.3□□□□□ -0.28
LDB3-209ENST00000623056 ADAMTS4O75173 837 aa13.3□□□□□ -0.28
LDB3-209ENST00000623056 SYPP08247 313 aa13.3□□□□□ -0.28
LDB3-209ENST00000623056 AHCYP23526 432 aa13.3□□□□□ -0.28
LDB3-209ENST00000623056 DCDC1P59894 354 aa13.3□□□□□ -0.28
LDB3-209ENST00000623056 RAB8AP61006 207 aa13.3□□□□□ -0.28
LDB3-209ENST00000623056 TSTA3Q13630 321 aaPredicted RBP13.3□□□□□ -0.28
LDB3-209ENST00000623056 SUZ12Q15022 739 aaKnown RBP13.3□□□□□ -0.28
LDB3-209ENST00000623056 ZNF791Q3KP31 576 aaPredicted RBP13.3□□□□□ -0.28
LDB3-209ENST00000623056 SYTL3Q4VX76 610 aa13.3□□□□□ -0.28
LDB3-209ENST00000623056 ENTPD8Q5MY95 495 aa13.3□□□□□ -0.28
LDB3-209ENST00000623056 EOGTQ5NDL2 527 aa13.3□□□□□ -0.28
LDB3-209ENST00000623056 C1orf94Q6P1W5 598 aa13.3□□□□□ -0.28
LDB3-209ENST00000623056 KRT74Q7RTS7 529 aa13.3□□□□□ -0.28
LDB3-209ENST00000623056 PRSS42Q7Z5A4 293 aa13.3□□□□□ -0.28
LDB3-209ENST00000623056 GPAT4Q86UL3 456 aa13.3□□□□□ -0.28
LDB3-209ENST00000623056 ADGRG3Q86Y34 549 aa13.3□□□□□ -0.28
LDB3-209ENST00000623056 LMNTD1Q8N9Z9 388 aa13.3□□□□□ -0.28
LDB3-209ENST00000623056 OR4F15Q8NGB8 312 aa13.3□□□□□ -0.28
LDB3-209ENST00000623056 HGDQ93099 445 aa13.3□□□□□ -0.28
LDB3-209ENST00000623056 SCAMP4Q969E2 229 aa13.3□□□□□ -0.28
LDB3-209ENST00000623056 TMEM169Q96HH4 297 aa13.3□□□□□ -0.28
LDB3-209ENST00000623056 OR2M2Q96R28 347 aa13.3□□□□□ -0.28
LDB3-209ENST00000623056 OSGEPL1Q9H4B0 414 aa13.3□□□□□ -0.28
LDB3-209ENST00000623056 ZNF624Q9P2J8 865 aaPredicted RBP13.3□□□□□ -0.28
LDB3-209ENST00000623056 ICKQ9UPZ9 632 aa13.3□□□□□ -0.28
LDB3-209ENST00000623056 STON1Q9Y6Q2 735 aa13.3□□□□□ -0.28
LDB3-209ENST00000623056 TEX13CA0A0J9YWL9 993 aa13.29□□□□□ -0.28
LDB3-209ENST00000623056 A0A1B0GVC2 190 aa13.29□□□□□ -0.28
LDB3-209ENST00000623056 A6NIN4 97 aa13.29□□□□□ -0.28
LDB3-209ENST00000623056 KDM4EB2RXH2 506 aaPredicted RBP13.29□□□□□ -0.28
LDB3-209ENST00000623056 RFXAPO00287 272 aa13.29□□□□□ -0.28
LDB3-209ENST00000623056 HMGN4O00479 90 aa13.29□□□□□ -0.28
LDB3-209ENST00000623056 EIF4EP06730 217 aaKnown RBP13.29□□□□□ -0.28
LDB3-209ENST00000623056 HOXD4P09016 255 aaPredicted RBP13.29□□□□□ -0.28
LDB3-209ENST00000623056 BMP8BP34820 402 aa13.29□□□□□ -0.28
LDB3-209ENST00000623056 SRP9P49458 86 aaKnown RBP13.29□□□□□ -0.28
LDB3-209ENST00000623056 MEF2AQ02078 507 aaPredicted RBP13.29□□□□□ -0.28
LDB3-209ENST00000623056 KCNA10Q16322 511 aa13.29□□□□□ -0.28
LDB3-209ENST00000623056 ZDHHC20Q5W0Z9 365 aa13.29□□□□□ -0.28
LDB3-209ENST00000623056 SLC27A4Q6P1M0 643 aa13.29□□□□□ -0.28
LDB3-209ENST00000623056 RTL4Q6ZR62 310 aa13.29□□□□□ -0.28
LDB3-209ENST00000623056 PRICKLE2Q7Z3G6 844 aa13.29□□□□□ -0.28
LDB3-209ENST00000623056 BMP8AQ7Z5Y6 402 aa13.29□□□□□ -0.28
LDB3-209ENST00000623056 LRRC28Q86X40 367 aaPredicted RBP13.29□□□□□ -0.28
LDB3-209ENST00000623056 GPR135Q8IZ08 494 aa13.29□□□□□ -0.28
LDB3-209ENST00000623056 MORN4Q8NDC4 146 aa13.29□□□□□ -0.28
LDB3-209ENST00000623056 MRPS31Q92665 395 aaKnown RBP13.29□□□□□ -0.28
LDB3-209ENST00000623056 ECHDC3Q96DC8 303 aa13.29□□□□□ -0.28
LDB3-209ENST00000623056 ZNF607Q96SK3 696 aa13.29□□□□□ -0.28
LDB3-209ENST00000623056 SECISBP2Q96T21 854 aaKnown RBP13.29□□□□□ -0.28
LDB3-209ENST00000623056 DPAGT1Q9H3H5 408 aa13.29□□□□□ -0.28
LDB3-209ENST00000623056 ERVMER34-1Q9H9K5 563 aa13.29□□□□□ -0.28
LDB3-209ENST00000623056 ASB6Q9NWX5 421 aa13.29□□□□□ -0.28
LDB3-209ENST00000623056 B4GALT6Q9UBX8 382 aa13.29□□□□□ -0.28
LDB3-209ENST00000623056 SCML1Q9UN30 329 aa13.29□□□□□ -0.28
LDB3-209ENST00000623056 RNF215Q9Y6U7 377 aa13.29□□□□□ -0.28
LDB3-209ENST00000623056 CKAP5Q14008 2032 aa13.29□□□□□ -0.28
LDB3-209ENST00000623056 LOC105369274A0A096LPK9 316 aa13.29□□□□□ -0.28
LDB3-209ENST00000623056 ATP6V1G2-DDX39BF2Z307 99 aa13.29□□□□□ -0.28
LDB3-209ENST00000623056 H7C4K7 107 aa13.29□□□□□ -0.28
LDB3-209ENST00000623056 TSPAN6O43657 245 aa13.29□□□□□ -0.28
LDB3-209ENST00000623056 B4GALT2O60909 372 aa13.29□□□□□ -0.28
LDB3-209ENST00000623056 CFDP00746 253 aaPredicted RBP13.29□□□□□ -0.28
LDB3-209ENST00000623056 RPL17P18621 184 aaKnown RBP13.29□□□□□ -0.28
LDB3-209ENST00000623056 CCT3P49368 545 aaKnown RBP13.29□□□□□ -0.28
LDB3-209ENST00000623056 TBPL1P62380 186 aa13.29□□□□□ -0.28
LDB3-209ENST00000623056 CAMK2DQ13557 499 aa13.29□□□□□ -0.28
LDB3-209ENST00000623056 CCSAPQ6IQ19 270 aaPredicted RBP13.29□□□□□ -0.28
LDB3-209ENST00000623056 OR4N4Q8N0Y3 316 aa13.29□□□□□ -0.28
LDB3-209ENST00000623056 POGLUT1Q8NBL1 392 aa13.29□□□□□ -0.28
LDB3-209ENST00000623056 OR8D4Q8NGM9 314 aa13.29□□□□□ -0.28
LDB3-209ENST00000623056 TEX47Q8TBZ9 253 aa13.29□□□□□ -0.28
LDB3-209ENST00000623056 SPRYD4Q8WW59 207 aaPredicted RBP13.29□□□□□ -0.28
LDB3-209ENST00000623056 TMEM159Q96B96 161 aa13.29□□□□□ -0.28
LDB3-209ENST00000623056 TOE1Q96GM8 510 aaKnown RBP13.29□□□□□ -0.28
LDB3-209ENST00000623056 ZSWIM3Q96MP5 696 aa13.29□□□□□ -0.28
LDB3-209ENST00000623056 PPA2Q9H2U2 334 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms