RNA–Protein interactions for RNA: ENST00000622817.4

CBWD3-219, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,877 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-219ENST00000622817 ZNF184Q99676 751 aaPredicted RBP6.53□□□□□ -1.36
CBWD3-219ENST00000622817 TREX2Q9BQ50 279 aaPredicted RBP6.53□□□□□ -1.36
CBWD3-219ENST00000622817 LRFN3Q9BTN0 628 aa6.53□□□□□ -1.36
CBWD3-219ENST00000622817 STRADBQ9C0K7 418 aa6.53□□□□□ -1.36
CBWD3-219ENST00000622817 TGIF2Q9GZN2 237 aa6.53□□□□□ -1.36
CBWD3-219ENST00000622817 IL1RAPQ9NPH3 570 aa6.53□□□□□ -1.36
CBWD3-219ENST00000622817 NECTIN3Q9NQS3 549 aa6.53□□□□□ -1.36
CBWD3-219ENST00000622817 C8orf4Q9NR00 106 aa6.53□□□□□ -1.36
CBWD3-219ENST00000622817 FBXO8Q9NRD0 319 aa6.53□□□□□ -1.36
CBWD3-219ENST00000622817 DUSP22Q9NRW4 184 aa6.53□□□□□ -1.36
CBWD3-219ENST00000622817 RXFP3Q9NSD7 469 aa6.53□□□□□ -1.36
CBWD3-219ENST00000622817 C14orf105Q9NVL8 296 aa6.53□□□□□ -1.36
CBWD3-219ENST00000622817 ZNF639Q9UID6 485 aa6.53□□□□□ -1.36
CBWD3-219ENST00000622817 CNOT11Q9UKZ1 510 aaKnown RBP6.53□□□□□ -1.36
CBWD3-219ENST00000622817 C15orf41Q9Y2V0 281 aa6.53□□□□□ -1.36
CBWD3-219ENST00000622817 LRRC42Q9Y546 428 aa6.53□□□□□ -1.36
CBWD3-219ENST00000622817 DNAH14Q0VDD8 3507 aa6.52□□□□□ -1.37
CBWD3-219ENST00000622817 OTOGLQ3ZCN5 2332 aa6.52□□□□□ -1.37
CBWD3-219ENST00000622817 IGLV3-12A0A075B6K2 115 aa6.52□□□□□ -1.37
CBWD3-219ENST00000622817 IGKV3D-11A0A0A0MRZ8 115 aa6.52□□□□□ -1.37
CBWD3-219ENST00000622817 PRAMEF27A3QJZ7 478 aa6.52□□□□□ -1.37
CBWD3-219ENST00000622817 OR2W5A6NFC9 320 aa6.52□□□□□ -1.37
CBWD3-219ENST00000622817 TTC36A6NLP5 189 aa6.52□□□□□ -1.37
CBWD3-219ENST00000622817 GNGT2O14610 69 aa6.52□□□□□ -1.37
CBWD3-219ENST00000622817 DYRK3O43781 588 aa6.52□□□□□ -1.37
CBWD3-219ENST00000622817 CPNE3O75131 537 aaKnown RBP6.52□□□□□ -1.37
CBWD3-219ENST00000622817 RFPL3O75679 317 aa6.52□□□□□ -1.37
CBWD3-219ENST00000622817 PRSS23O95084 383 aa6.52□□□□□ -1.37
CBWD3-219ENST00000622817 MFN2O95140 757 aa6.52□□□□□ -1.37
CBWD3-219ENST00000622817 TIAF1O95411 115 aa6.52□□□□□ -1.37
CBWD3-219ENST00000622817 CBX7O95931 251 aa6.52□□□□□ -1.37
CBWD3-219ENST00000622817 AK1P00568 194 aa6.52□□□□□ -1.37
CBWD3-219ENST00000622817 CST1P01037 141 aa6.52□□□□□ -1.37
CBWD3-219ENST00000622817 OPN1SWP03999 348 aa6.52□□□□□ -1.37
CBWD3-219ENST00000622817 FABP3P05413 133 aa6.52□□□□□ -1.37
CBWD3-219ENST00000622817 ETS2P15036 469 aa6.52□□□□□ -1.37
CBWD3-219ENST00000622817 RORAP35398 523 aa6.52□□□□□ -1.37
CBWD3-219ENST00000622817 PDX1P52945 283 aa6.52□□□□□ -1.37
CBWD3-219ENST00000622817 KCNJ10P78508 379 aa6.52□□□□□ -1.37
CBWD3-219ENST00000622817 HPCAP84074 193 aa6.52□□□□□ -1.37
CBWD3-219ENST00000622817 ZNF155Q12901 538 aaPredicted RBP6.52□□□□□ -1.37
CBWD3-219ENST00000622817 FOXC1Q12948 553 aa6.52□□□□□ -1.37
CBWD3-219ENST00000622817 ZNF267Q14586 743 aaPredicted RBP6.52□□□□□ -1.37
CBWD3-219ENST00000622817 EXOSC7Q15024 291 aaKnown RBP6.52□□□□□ -1.37
CBWD3-219ENST00000622817 ZNHIT3Q15649 155 aaPredicted RBP6.52□□□□□ -1.37
CBWD3-219ENST00000622817 NSDHLQ15738 373 aa6.52□□□□□ -1.37
CBWD3-219ENST00000622817 GPAT3Q53EU6 434 aa6.52□□□□□ -1.37
CBWD3-219ENST00000622817 IFI44LQ53G44 452 aa6.52□□□□□ -1.37
CBWD3-219ENST00000622817 RPS26P11Q5JNZ5 115 aaPredicted RBP6.52□□□□□ -1.37
CBWD3-219ENST00000622817 HEPHL1Q6MZM0 1159 aa6.52□□□□□ -1.37
CBWD3-219ENST00000622817 IZUMO2Q6UXV1 221 aa6.52□□□□□ -1.37
CBWD3-219ENST00000622817 DGAT2L6Q6ZPD8 337 aa6.52□□□□□ -1.37
CBWD3-219ENST00000622817 VTCN1Q7Z7D3 282 aa6.52□□□□□ -1.37
CBWD3-219ENST00000622817 PACRGLQ8N7B6 248 aa6.52□□□□□ -1.37
CBWD3-219ENST00000622817 SLC38A9Q8NBW4 561 aa6.52□□□□□ -1.37
CBWD3-219ENST00000622817 SLC16A11Q8NCK7 471 aa6.52□□□□□ -1.37
CBWD3-219ENST00000622817 OR7G1Q8NGA0 311 aa6.52□□□□□ -1.37
CBWD3-219ENST00000622817 OR52R1Q8NGF1 315 aa6.52□□□□□ -1.37
CBWD3-219ENST00000622817 SPPL2AQ8TCT8 520 aa6.52□□□□□ -1.37
CBWD3-219ENST00000622817 DOK4Q8TEW6 326 aa6.52□□□□□ -1.37
CBWD3-219ENST00000622817 GEMIN6Q8WXD5 167 aaKnown RBP6.52□□□□□ -1.37
CBWD3-219ENST00000622817 OTUB1Q96FW1 271 aaPredicted RBP6.52□□□□□ -1.37
CBWD3-219ENST00000622817 VPS50Q96JG6 964 aa6.52□□□□□ -1.37
CBWD3-219ENST00000622817 COL21A1Q96P44 957 aa6.52□□□□□ -1.37
CBWD3-219ENST00000622817 STACQ99469 402 aa6.52□□□□□ -1.37
CBWD3-219ENST00000622817 CMKLR1Q99788 373 aa6.52□□□□□ -1.37
CBWD3-219ENST00000622817 C9orf16Q9BUW7 83 aa6.52□□□□□ -1.37
CBWD3-219ENST00000622817 BTBD2Q9BX70 525 aa6.52□□□□□ -1.37
CBWD3-219ENST00000622817 PIGUQ9H490 435 aa6.52□□□□□ -1.37
CBWD3-219ENST00000622817 TRIM45Q9H8W5 580 aaPredicted RBP6.52□□□□□ -1.37
CBWD3-219ENST00000622817 SLC22A11Q9NSA0 550 aa6.52□□□□□ -1.37
CBWD3-219ENST00000622817 MKL2Q9ULH7 1088 aa6.52□□□□□ -1.37
CBWD3-219ENST00000622817 SATB2Q9UPW6 733 aa6.52□□□□□ -1.37
CBWD3-219ENST00000622817 PCDHGA1Q9Y5H4 931 aa6.52□□□□□ -1.37
CBWD3-219ENST00000622817 GPC6Q9Y625 555 aaPredicted RBP6.52□□□□□ -1.37
CBWD3-219ENST00000622817 KCNE3Q9Y6H6 103 aa6.52□□□□□ -1.37
CBWD3-219ENST00000622817 TCRBV16S1A1N1A0A5B0 115 aa6.51□□□□□ -1.37
CBWD3-219ENST00000622817 SAC3D1A6NKF1 404 aa6.51□□□□□ -1.37
CBWD3-219ENST00000622817 A8MVJ9 347 aa6.51□□□□□ -1.37
CBWD3-219ENST00000622817 C17orf105B2RV13 164 aa6.51□□□□□ -1.37
CBWD3-219ENST00000622817 TMEM229AB2RXF0 380 aa6.51□□□□□ -1.37
CBWD3-219ENST00000622817 H0YJX3 145 aa6.51□□□□□ -1.37
CBWD3-219ENST00000622817 PRAMEF2O60811 474 aa6.51□□□□□ -1.37
CBWD3-219ENST00000622817 H6PDO95479 791 aa6.51□□□□□ -1.37
CBWD3-219ENST00000622817 CHRM4P08173 479 aa6.51□□□□□ -1.37
CBWD3-219ENST00000622817 ACP2P11117 423 aa6.51□□□□□ -1.37
CBWD3-219ENST00000622817 CCL4P13236 92 aa6.51□□□□□ -1.37
CBWD3-219ENST00000622817 ITGA2P17301 1181 aa6.51□□□□□ -1.37
CBWD3-219ENST00000622817 AGXTP21549 392 aa6.51□□□□□ -1.37
CBWD3-219ENST00000622817 NBL1P41271 181 aa6.51□□□□□ -1.37
CBWD3-219ENST00000622817 MAP3K8P41279 467 aa6.51□□□□□ -1.37
CBWD3-219ENST00000622817 HSPA13P48723 471 aa6.51□□□□□ -1.37
CBWD3-219ENST00000622817 PGDP52209 483 aa6.51□□□□□ -1.37
CBWD3-219ENST00000622817 FUT5Q11128 374 aa6.51□□□□□ -1.37
CBWD3-219ENST00000622817 FUT7Q11130 342 aa6.51□□□□□ -1.37
CBWD3-219ENST00000622817 DUSP8Q13202 625 aa6.51□□□□□ -1.37
CBWD3-219ENST00000622817 ELAVL1Q15717 326 aaKnown RBP6.51□□□□□ -1.37
CBWD3-219ENST00000622817 DUSP5Q16690 384 aa6.51□□□□□ -1.37
CBWD3-219ENST00000622817 ARHGAP11BQ3KRB8 267 aa6.51□□□□□ -1.37
CBWD3-219ENST00000622817 CCDC157Q569K6 752 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms