RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 SLC22A16Q86VW1 577 aa8.53□□□□□ -1.04
HDAC9-229ENST00000622668 PGAM4Q8N0Y7 254 aa8.53□□□□□ -1.04
HDAC9-229ENST00000622668 SLC25A45Q8N413 288 aa8.53□□□□□ -1.04
HDAC9-229ENST00000622668 RBM15BQ8NDT2 890 aaKnown RBP8.53□□□□□ -1.04
HDAC9-229ENST00000622668 OR51A7Q8NH64 312 aa8.53□□□□□ -1.04
HDAC9-229ENST00000622668 PIK3R3Q92569 461 aa8.53□□□□□ -1.04
HDAC9-229ENST00000622668 OR4K3Q96R72 315 aa8.53□□□□□ -1.04
HDAC9-229ENST00000622668 SLITRK2Q9H156 845 aa8.53□□□□□ -1.04
HDAC9-229ENST00000622668 ASB6Q9NWX5 421 aa8.53□□□□□ -1.04
HDAC9-229ENST00000622668 PPT2Q9UMR5 302 aa8.53□□□□□ -1.04
HDAC9-229ENST00000622668 AKAP6Q13023 2319 aa8.53□□□□□ -1.04
HDAC9-229ENST00000622668 SDHDO14521 159 aa8.53□□□□□ -1.04
HDAC9-229ENST00000622668 B4GAT1O43505 415 aa8.53□□□□□ -1.04
HDAC9-229ENST00000622668 DIRAS1O95057 198 aa8.53□□□□□ -1.04
HDAC9-229ENST00000622668 AGFG2O95081 481 aa8.53□□□□□ -1.04
HDAC9-229ENST00000622668 BCL10O95999 233 aa8.53□□□□□ -1.04
HDAC9-229ENST00000622668 H1F0P07305 194 aaKnown RBP8.53□□□□□ -1.04
HDAC9-229ENST00000622668 ATP6V1B1P15313 513 aa8.53□□□□□ -1.04
HDAC9-229ENST00000622668 DPP4P27487 766 aa8.53□□□□□ -1.04
HDAC9-229ENST00000622668 ARNTP27540 789 aa8.53□□□□□ -1.04
HDAC9-229ENST00000622668 OR1E2P47887 323 aa8.53□□□□□ -1.04
HDAC9-229ENST00000622668 DCAF7P61962 342 aa8.53□□□□□ -1.04
HDAC9-229ENST00000622668 BTG2P78543 158 aa8.53□□□□□ -1.04
HDAC9-229ENST00000622668 ILKQ13418 452 aa8.53□□□□□ -1.04
HDAC9-229ENST00000622668 KPNB1Q14974 876 aaKnown RBP8.53□□□□□ -1.04
HDAC9-229ENST00000622668 ELAVL1Q15717 326 aaKnown RBP8.53□□□□□ -1.04
HDAC9-229ENST00000622668 PRAMEF8Q5VWM4 474 aa8.53□□□□□ -1.04
HDAC9-229ENST00000622668 PRAMEF7Q5VXH5 474 aa8.53□□□□□ -1.04
HDAC9-229ENST00000622668 KCTD8Q6ZWB6 473 aa8.53□□□□□ -1.04
HDAC9-229ENST00000622668 OR5D16Q8NGK9 328 aa8.53□□□□□ -1.04
HDAC9-229ENST00000622668 OR1L3Q8NH93 324 aa8.53□□□□□ -1.04
HDAC9-229ENST00000622668 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.53□□□□□ -1.04
HDAC9-229ENST00000622668 HSPBAP1Q96EW2 488 aa8.53□□□□□ -1.04
HDAC9-229ENST00000622668 LINC00615Q96LM1 132 aaPredicted RBP8.53□□□□□ -1.04
HDAC9-229ENST00000622668 TMEM79Q9BSE2 394 aa8.53□□□□□ -1.04
HDAC9-229ENST00000622668 DHRS4Q9BTZ2 278 aa8.53□□□□□ -1.04
HDAC9-229ENST00000622668 TRIM8Q9BZR9 551 aa8.53□□□□□ -1.04
HDAC9-229ENST00000622668 BHLHE41Q9C0J9 482 aaPredicted RBP8.53□□□□□ -1.04
HDAC9-229ENST00000622668 CLN6Q9NWW5 311 aa8.53□□□□□ -1.04
HDAC9-229ENST00000622668 RHCGQ9UBD6 479 aa8.53□□□□□ -1.04
HDAC9-229ENST00000622668 CBLCQ9ULV8 474 aa8.53□□□□□ -1.04
HDAC9-229ENST00000622668 POFUT2Q9Y2G5 429 aa8.53□□□□□ -1.04
HDAC9-229ENST00000622668 KLF13Q9Y2Y9 288 aaPredicted RBP8.53□□□□□ -1.04
HDAC9-229ENST00000622668 TRAV17A0A0B4J275 112 aa8.53□□□□□ -1.04
HDAC9-229ENST00000622668 DPM1O60762 260 aa8.53□□□□□ -1.04
HDAC9-229ENST00000622668 KCNK5O95279 499 aa8.53□□□□□ -1.04
HDAC9-229ENST00000622668 CKMT1AP12532 417 aa8.53□□□□□ -1.04
HDAC9-229ENST00000622668 SDC1P18827 310 aa8.53□□□□□ -1.04
HDAC9-229ENST00000622668 HK1P19367 917 aa8.53□□□□□ -1.04
HDAC9-229ENST00000622668 B4GALNT1Q00973 533 aa8.53□□□□□ -1.04
HDAC9-229ENST00000622668 ZNF750Q32MQ0 723 aa8.53□□□□□ -1.04
HDAC9-229ENST00000622668 METTL2BQ6P1Q9 378 aaKnown RBP8.53□□□□□ -1.04
HDAC9-229ENST00000622668 PROKR2Q8NFJ6 384 aa8.53□□□□□ -1.04
HDAC9-229ENST00000622668 SNX33Q8WV41 574 aa8.53□□□□□ -1.04
HDAC9-229ENST00000622668 TMBIM1Q969X1 311 aa8.53□□□□□ -1.04
HDAC9-229ENST00000622668 L3HYPDHQ96EM0 354 aa8.53□□□□□ -1.04
HDAC9-229ENST00000622668 CLPTM1LQ96KA5 538 aa8.53□□□□□ -1.04
HDAC9-229ENST00000622668 DPH2Q9BQC3 489 aaPredicted RBP8.53□□□□□ -1.04
HDAC9-229ENST00000622668 GSTO2Q9H4Y5 243 aa8.53□□□□□ -1.04
HDAC9-229ENST00000622668 TAS2R10Q9NYW0 307 aa8.53□□□□□ -1.04
HDAC9-229ENST00000622668 BLACEA4D250 179 aa8.52□□□□□ -1.04
HDAC9-229ENST00000622668 H0YC42 278 aa8.52□□□□□ -1.04
HDAC9-229ENST00000622668 MAGEB3O15480 346 aa8.52□□□□□ -1.04
HDAC9-229ENST00000622668 GREM1O60565 184 aa8.52□□□□□ -1.04
HDAC9-229ENST00000622668 DNAJA2O60884 412 aa8.52□□□□□ -1.04
HDAC9-229ENST00000622668 MFN2O95140 757 aa8.52□□□□□ -1.04
HDAC9-229ENST00000622668 TSPAN19P0C672 248 aa8.52□□□□□ -1.04
HDAC9-229ENST00000622668 CLRN1P58418 232 aa8.52□□□□□ -1.04
HDAC9-229ENST00000622668 TGFBR3Q03167 851 aa8.52□□□□□ -1.04
HDAC9-229ENST00000622668 MRPL49Q13405 166 aaKnown RBP8.52□□□□□ -1.04
HDAC9-229ENST00000622668 TMEM207Q6UWW9 146 aa8.52□□□□□ -1.04
HDAC9-229ENST00000622668 RPTNQ6XPR3 784 aa8.52□□□□□ -1.04
HDAC9-229ENST00000622668 SPATC1Q76KD6 591 aa8.52□□□□□ -1.04
HDAC9-229ENST00000622668 B3GNT8Q7Z7M8 397 aa8.52□□□□□ -1.04
HDAC9-229ENST00000622668 OAFQ86UD1 273 aa8.52□□□□□ -1.04
HDAC9-229ENST00000622668 PHTF2Q8N3S3 785 aa8.52□□□□□ -1.04
HDAC9-229ENST00000622668 BBS10Q8TAM1 723 aa8.52□□□□□ -1.04
HDAC9-229ENST00000622668 SAP25Q8TEE9 199 aa8.52□□□□□ -1.04
HDAC9-229ENST00000622668 GEMIN6Q8WXD5 167 aaKnown RBP8.52□□□□□ -1.04
HDAC9-229ENST00000622668 POP5Q969H6 163 aaKnown RBP8.52□□□□□ -1.04
HDAC9-229ENST00000622668 MTERF3Q96E29 417 aa8.52□□□□□ -1.04
HDAC9-229ENST00000622668 RACGAP1Q9H0H5 632 aa8.52□□□□□ -1.04
HDAC9-229ENST00000622668 SERHLQ9NQF3 203 aa8.52□□□□□ -1.04
HDAC9-229ENST00000622668 RXFP3Q9NSD7 469 aa8.52□□□□□ -1.04
HDAC9-229ENST00000622668 GREB1LQ9C091 1923 aaPredicted RBP8.52□□□□□ -1.05
HDAC9-229ENST00000622668 CH25HO95992 272 aa8.52□□□□□ -1.05
HDAC9-229ENST00000622668 PSMB9P28065 219 aa8.52□□□□□ -1.05
HDAC9-229ENST00000622668 DSG2Q14126 1118 aa8.52□□□□□ -1.05
HDAC9-229ENST00000622668 LTB4RQ15722 352 aa8.52□□□□□ -1.05
HDAC9-229ENST00000622668 ALG10BQ5I7T1 473 aa8.52□□□□□ -1.05
HDAC9-229ENST00000622668 C9orf135Q5VTT2 229 aa8.52□□□□□ -1.05
HDAC9-229ENST00000622668 GALNTL5Q7Z4T8 443 aa8.52□□□□□ -1.05
HDAC9-229ENST00000622668 PRR7Q8TB68 274 aa8.52□□□□□ -1.05
HDAC9-229ENST00000622668 MMADHCQ9H3L0 296 aaPredicted RBP8.52□□□□□ -1.05
HDAC9-229ENST00000622668 KLHL31Q9H511 634 aa8.52□□□□□ -1.05
HDAC9-229ENST00000622668 NANSQ9NR45 359 aa8.52□□□□□ -1.05
HDAC9-229ENST00000622668 NFKBIL1Q9UBC1 381 aaPredicted RBP8.52□□□□□ -1.05
HDAC9-229ENST00000622668 DAPP1Q9UN19 280 aa8.52□□□□□ -1.05
HDAC9-229ENST00000622668 PPIL1Q9Y3C6 166 aa8.52□□□□□ -1.05
HDAC9-229ENST00000622668 RBM7Q9Y580 266 aaKnown RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms