RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 NPFFR2Q9Y5X5 522 aa17.15■□□□□ 0.34
CIRBP-245ENST00000621399 FAM234BA2RU67 622 aa17.14■□□□□ 0.33
CIRBP-245ENST00000621399 FRG2CA6NGY1 282 aa17.14■□□□□ 0.33
CIRBP-245ENST00000621399 TTLL8A6PVC2 850 aa17.14■□□□□ 0.33
CIRBP-245ENST00000621399 CAPN14A8MX76 684 aa17.14■□□□□ 0.33
CIRBP-245ENST00000621399 SUV39H1O43463 412 aa17.14■□□□□ 0.33
CIRBP-245ENST00000621399 FBXO45P0C2W1 286 aa17.14■□□□□ 0.33
CIRBP-245ENST00000621399 LSP1P33241 339 aa17.14■□□□□ 0.33
CIRBP-245ENST00000621399 SOAT1P35610 550 aa17.14■□□□□ 0.33
CIRBP-245ENST00000621399 ATP4BP51164 291 aa17.14■□□□□ 0.33
CIRBP-245ENST00000621399 SEC24CP53992 1094 aa17.14■□□□□ 0.33
CIRBP-245ENST00000621399 SQLEQ14534 574 aa17.14■□□□□ 0.33
CIRBP-245ENST00000621399 ZNHIT3Q15649 155 aaPredicted RBP17.14■□□□□ 0.33
CIRBP-245ENST00000621399 MAPKAPK3Q16644 382 aa17.14■□□□□ 0.33
CIRBP-245ENST00000621399 ZNF791Q3KP31 576 aaPredicted RBP17.14■□□□□ 0.33
CIRBP-245ENST00000621399 LYPD8Q6UX82 237 aa17.14■□□□□ 0.33
CIRBP-245ENST00000621399 RTL4Q6ZR62 310 aa17.14■□□□□ 0.33
CIRBP-245ENST00000621399 MDGA2Q7Z553 956 aa17.14■□□□□ 0.33
CIRBP-245ENST00000621399 SLC44A2Q8IWA5 706 aaPredicted RBP17.14■□□□□ 0.33
CIRBP-245ENST00000621399 DND1Q8IYX4 353 aaKnown RBP17.14■□□□□ 0.33
CIRBP-245ENST00000621399 PRR22Q8IZ63 422 aa17.14■□□□□ 0.33
CIRBP-245ENST00000621399 TMEM178AQ8NBL3 297 aa17.14■□□□□ 0.33
CIRBP-245ENST00000621399 SPACA9Q96E40 222 aaPredicted RBP17.14■□□□□ 0.33
CIRBP-245ENST00000621399 SGCZQ96LD1 299 aa17.14■□□□□ 0.33
CIRBP-245ENST00000621399 MS4A4EQ96PG1 132 aa17.14■□□□□ 0.33
CIRBP-245ENST00000621399 HES7Q9BYE0 225 aa17.14■□□□□ 0.33
CIRBP-245ENST00000621399 RABEP2Q9H5N1 569 aa17.14■□□□□ 0.33
CIRBP-245ENST00000621399 TIMMDC1Q9NPL8 285 aa17.14■□□□□ 0.33
CIRBP-245ENST00000621399 BTNL2Q9UIR0 455 aa17.14■□□□□ 0.33
CIRBP-245ENST00000621399 PCDHGA10Q9Y5H3 936 aa17.14■□□□□ 0.33
CIRBP-245ENST00000621399 GCN1Q92616 2671 aaKnown RBP17.14■□□□□ 0.33
CIRBP-245ENST00000621399 BSNQ9UPA5 3926 aa17.13■□□□□ 0.33
CIRBP-245ENST00000621399 TO15178 435 aa17.13■□□□□ 0.33
CIRBP-245ENST00000621399 SORBS2O94875 1100 aaKnown RBP17.13■□□□□ 0.33
CIRBP-245ENST00000621399 CT45A8P0DMV1 189 aa17.13■□□□□ 0.33
CIRBP-245ENST00000621399 CT45A9P0DMV2 189 aa17.13■□□□□ 0.33
CIRBP-245ENST00000621399 ABCD3P28288 659 aa17.13■□□□□ 0.33
CIRBP-245ENST00000621399 ZFP36L2P47974 494 aaKnown RBP17.13■□□□□ 0.33
CIRBP-245ENST00000621399 TMED10P49755 219 aaKnown RBP17.13■□□□□ 0.33
CIRBP-245ENST00000621399 GNGT1P63211 74 aa17.13■□□□□ 0.33
CIRBP-245ENST00000621399 PSPHP78330 225 aa17.13■□□□□ 0.33
CIRBP-245ENST00000621399 LRRC74AQ0VAA2 488 aa17.13■□□□□ 0.33
CIRBP-245ENST00000621399 PLCXD2Q0VAA5 305 aa17.13■□□□□ 0.33
CIRBP-245ENST00000621399 C19orf57Q0VDD7 668 aa17.13■□□□□ 0.33
CIRBP-245ENST00000621399 TP53BP2Q13625 1128 aa17.13■□□□□ 0.33
CIRBP-245ENST00000621399 VPS26BQ4G0F5 336 aa17.13■□□□□ 0.33
CIRBP-245ENST00000621399 CT45A2Q5DJT8 189 aa17.13■□□□□ 0.33
CIRBP-245ENST00000621399 NPSR1Q6W5P4 371 aa17.13■□□□□ 0.33
CIRBP-245ENST00000621399 WDR53Q7Z5U6 358 aaPredicted RBP17.13■□□□□ 0.33
CIRBP-245ENST00000621399 OR56A1Q8NGH5 318 aa17.13■□□□□ 0.33
CIRBP-245ENST00000621399 OR5M3Q8NGP4 307 aa17.13■□□□□ 0.33
CIRBP-245ENST00000621399 OR5AK3PQ8NH89 298 aa17.13■□□□□ 0.33
CIRBP-245ENST00000621399 SFXN5Q8TD22 340 aa17.13■□□□□ 0.33
CIRBP-245ENST00000621399 MOAP1Q96BY2 351 aa17.13■□□□□ 0.33
CIRBP-245ENST00000621399 SCMH1Q96GD3 660 aa17.13■□□□□ 0.33
CIRBP-245ENST00000621399 CCDC115Q96NT0 180 aa17.13■□□□□ 0.33
CIRBP-245ENST00000621399 LMF2Q9BU23 707 aaKnown RBP17.13■□□□□ 0.33
CIRBP-245ENST00000621399 CCDC167Q9P0B6 97 aa17.13■□□□□ 0.33
CIRBP-245ENST00000621399 OR10H1Q9Y4A9 318 aa17.13■□□□□ 0.33
CIRBP-245ENST00000621399 PCDHGB6Q9Y5F9 930 aa17.13■□□□□ 0.33
CIRBP-245ENST00000621399 CPAMD8Q8IZJ3 1885 aa17.13■□□□□ 0.33
CIRBP-245ENST00000621399 CNTRLQ7Z7A1 2325 aa17.12■□□□□ 0.33
CIRBP-245ENST00000621399 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.12■□□□□ 0.33
CIRBP-245ENST00000621399 GMNCA6NCL1 334 aa17.12■□□□□ 0.33
CIRBP-245ENST00000621399 TTC36A6NLP5 189 aa17.12■□□□□ 0.33
CIRBP-245ENST00000621399 NME2P1O60361 137 aa17.12■□□□□ 0.33
CIRBP-245ENST00000621399 NAGAP17050 411 aa17.12■□□□□ 0.33
CIRBP-245ENST00000621399 NME2P22392 152 aa17.12■□□□□ 0.33
CIRBP-245ENST00000621399 KRT20P35900 424 aa17.12■□□□□ 0.33
CIRBP-245ENST00000621399 PRIM2P49643 509 aa17.12■□□□□ 0.33
CIRBP-245ENST00000621399 KCNK10P57789 538 aa17.12■□□□□ 0.33
CIRBP-245ENST00000621399 PSG6Q00889 435 aa17.12■□□□□ 0.33
CIRBP-245ENST00000621399 TIGD2Q4W5G0 525 aa17.12■□□□□ 0.33
CIRBP-245ENST00000621399 AGKQ53H12 422 aa17.12■□□□□ 0.33
CIRBP-245ENST00000621399 MFSD12Q6NUT3 480 aa17.12■□□□□ 0.33
CIRBP-245ENST00000621399 RPUSD3Q6P087 351 aaKnown RBP17.12■□□□□ 0.33
CIRBP-245ENST00000621399 BHLHB9Q6PI77 547 aa17.12■□□□□ 0.33
CIRBP-245ENST00000621399 PRICKLE2Q7Z3G6 844 aa17.12■□□□□ 0.33
CIRBP-245ENST00000621399 GALNTL5Q7Z4T8 443 aa17.12■□□□□ 0.33
CIRBP-245ENST00000621399 SLC34A3Q8N130 599 aa17.12■□□□□ 0.33
CIRBP-245ENST00000621399 CDRT4Q8N9R6 151 aa17.12■□□□□ 0.33
CIRBP-245ENST00000621399 GOLM1Q8NBJ4 401 aa17.12■□□□□ 0.33
CIRBP-245ENST00000621399 FAM13CQ8NE31 585 aa17.12■□□□□ 0.33
CIRBP-245ENST00000621399 SLC9A6Q92581 669 aa17.12■□□□□ 0.33
CIRBP-245ENST00000621399 VPS33AQ96AX1 596 aa17.12■□□□□ 0.33
CIRBP-245ENST00000621399 OMA1Q96E52 524 aa17.12■□□□□ 0.33
CIRBP-245ENST00000621399 GIMAP5Q96F15 307 aa17.12■□□□□ 0.33
CIRBP-245ENST00000621399 C16orf58Q96GQ5 468 aa17.12■□□□□ 0.33
CIRBP-245ENST00000621399 PANX1Q96RD7 426 aa17.12■□□□□ 0.33
CIRBP-245ENST00000621399 YIPF4Q9BSR8 244 aa17.12■□□□□ 0.33
CIRBP-245ENST00000621399 TRIM4Q9C037 500 aa17.12■□□□□ 0.33
CIRBP-245ENST00000621399 FAM107BQ9H098 131 aa17.12■□□□□ 0.33
CIRBP-245ENST00000621399 RMND5AQ9H871 391 aa17.12■□□□□ 0.33
CIRBP-245ENST00000621399 Q9N2J8 555 aa17.12■□□□□ 0.33
CIRBP-245ENST00000621399 TMEM45AQ9NWC5 275 aa17.12■□□□□ 0.33
CIRBP-245ENST00000621399 FAM53CQ9NYF3 392 aa17.12■□□□□ 0.33
CIRBP-245ENST00000621399 RNF103-CHMP3A0A140T963 221 aa17.11■□□□□ 0.33
CIRBP-245ENST00000621399 CCDC154A6NI56 674 aa17.11■□□□□ 0.33
CIRBP-245ENST00000621399 TP53I11O14683 189 aa17.11■□□□□ 0.33
CIRBP-245ENST00000621399 REM1O75628 298 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms