RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 RAE1P78406 368 aaKnown RBP6.58□□□□□ -1.36
NEDD9-216ENST00000620854 RPL6Q02878 288 aaKnown RBP6.58□□□□□ -1.36
NEDD9-216ENST00000620854 MAB21L1Q13394 359 aa6.58□□□□□ -1.36
NEDD9-216ENST00000620854 ASAH1Q13510 395 aa6.58□□□□□ -1.36
NEDD9-216ENST00000620854 TOR1AIP1Q5JTV8 583 aa6.58□□□□□ -1.36
NEDD9-216ENST00000620854 TOR2AQ5JU69 321 aa6.58□□□□□ -1.36
NEDD9-216ENST00000620854 IDNKQ5T6J7 187 aa6.58□□□□□ -1.36
NEDD9-216ENST00000620854 ZDHHC20Q5W0Z9 365 aa6.58□□□□□ -1.36
NEDD9-216ENST00000620854 TBC1D3GQ6DHY5 549 aa6.58□□□□□ -1.36
NEDD9-216ENST00000620854 TBC1D3CQ6IPX1 549 aa6.58□□□□□ -1.36
NEDD9-216ENST00000620854 Q6ZVL8 140 aa6.58□□□□□ -1.36
NEDD9-216ENST00000620854 TBC1D3Q8IZP1 549 aaPredicted RBP6.58□□□□□ -1.36
NEDD9-216ENST00000620854 RDH10Q8IZV5 341 aa6.58□□□□□ -1.36
NEDD9-216ENST00000620854 L3MBTL4Q8NA19 623 aa6.58□□□□□ -1.36
NEDD9-216ENST00000620854 SPERTQ8NA61 448 aa6.58□□□□□ -1.36
NEDD9-216ENST00000620854 OR2AP1Q8NGE2 309 aa6.58□□□□□ -1.36
NEDD9-216ENST00000620854 ZCCHC10Q8TBK6 192 aa6.58□□□□□ -1.36
NEDD9-216ENST00000620854 TIFAQ96CG3 184 aa6.58□□□□□ -1.36
NEDD9-216ENST00000620854 OTUB2Q96DC9 234 aa6.58□□□□□ -1.36
NEDD9-216ENST00000620854 OR4K3Q96R72 315 aa6.58□□□□□ -1.36
NEDD9-216ENST00000620854 SAP130Q9H0E3 1048 aa6.58□□□□□ -1.36
NEDD9-216ENST00000620854 OR2AG1Q9H205 316 aa6.58□□□□□ -1.36
NEDD9-216ENST00000620854 KLHL31Q9H511 634 aa6.58□□□□□ -1.36
NEDD9-216ENST00000620854 ZDHHC3Q9NYG2 299 aa6.58□□□□□ -1.36
NEDD9-216ENST00000620854 NFKBIL1Q9UBC1 381 aaPredicted RBP6.58□□□□□ -1.36
NEDD9-216ENST00000620854 RANBP2P49792 3224 aaKnown RBP6.58□□□□□ -1.36
NEDD9-216ENST00000620854 HYKKA2RU49 373 aa6.58□□□□□ -1.36
NEDD9-216ENST00000620854 FRS3O43559 492 aa6.58□□□□□ -1.36
NEDD9-216ENST00000620854 FZD6O60353 706 aa6.58□□□□□ -1.36
NEDD9-216ENST00000620854 VNN2O95498 520 aa6.58□□□□□ -1.36
NEDD9-216ENST00000620854 CPN2P22792 545 aa6.58□□□□□ -1.36
NEDD9-216ENST00000620854 LHCGRP22888 699 aa6.58□□□□□ -1.36
NEDD9-216ENST00000620854 ITPKBP27987 946 aa6.58□□□□□ -1.36
NEDD9-216ENST00000620854 XCR1P46094 333 aa6.58□□□□□ -1.36
NEDD9-216ENST00000620854 OMPP47874 163 aa6.58□□□□□ -1.36
NEDD9-216ENST00000620854 FABP5Q01469 135 aa6.58□□□□□ -1.36
NEDD9-216ENST00000620854 FCN2Q15485 313 aa6.58□□□□□ -1.36
NEDD9-216ENST00000620854 MLIPQ5VWP3 458 aa6.58□□□□□ -1.36
NEDD9-216ENST00000620854 Q6ZVU0 165 aa6.58□□□□□ -1.36
NEDD9-216ENST00000620854 COMMD6Q7Z4G1 85 aa6.58□□□□□ -1.36
NEDD9-216ENST00000620854 SLC7A13Q8TCU3 470 aa6.58□□□□□ -1.36
NEDD9-216ENST00000620854 ZNF431Q8TF32 576 aaPredicted RBP6.58□□□□□ -1.36
NEDD9-216ENST00000620854 GSDMCQ9BYG8 508 aa6.58□□□□□ -1.36
NEDD9-216ENST00000620854 ELL3Q9HB65 397 aaPredicted RBP6.58□□□□□ -1.36
NEDD9-216ENST00000620854 RDH14Q9HBH5 336 aa6.58□□□□□ -1.36
NEDD9-216ENST00000620854 C12orf4Q9NQ89 552 aa6.58□□□□□ -1.36
NEDD9-216ENST00000620854 FTSJ1Q9UET6 329 aa6.58□□□□□ -1.36
NEDD9-216ENST00000620854 MKL2Q9ULH7 1088 aa6.58□□□□□ -1.36
NEDD9-216ENST00000620854 EXO1Q9UQ84 846 aaKnown RBP6.58□□□□□ -1.36
NEDD9-216ENST00000620854 STON1Q9Y6Q2 735 aa6.58□□□□□ -1.36
NEDD9-216ENST00000620854 ZSWIM8A7E2V4 1837 aa6.58□□□□□ -1.36
NEDD9-216ENST00000620854 A0A1W2PPK0 400 aa6.58□□□□□ -1.36
NEDD9-216ENST00000620854 FAM86C2PA6NEL3 165 aa6.58□□□□□ -1.36
NEDD9-216ENST00000620854 LEUTXA8MZ59 168 aa6.58□□□□□ -1.36
NEDD9-216ENST00000620854 H3BSH0 61 aa6.58□□□□□ -1.36
NEDD9-216ENST00000620854 SEMA7AO75326 666 aa6.58□□□□□ -1.36
NEDD9-216ENST00000620854 ZNF8P17098 575 aaPredicted RBP6.58□□□□□ -1.36
NEDD9-216ENST00000620854 MAT2AP31153 395 aaKnown RBP6.58□□□□□ -1.36
NEDD9-216ENST00000620854 MLLT3P42568 568 aaPredicted RBP6.58□□□□□ -1.36
NEDD9-216ENST00000620854 MVDP53602 400 aa6.58□□□□□ -1.36
NEDD9-216ENST00000620854 LIMK1P53667 647 aa6.58□□□□□ -1.36
NEDD9-216ENST00000620854 ZNF791Q3KP31 576 aaPredicted RBP6.58□□□□□ -1.36
NEDD9-216ENST00000620854 BICRALQ6AI39 1079 aa6.58□□□□□ -1.36
NEDD9-216ENST00000620854 LAMTOR1Q6IAA8 161 aa6.58□□□□□ -1.36
NEDD9-216ENST00000620854 ZNF613Q6PF04 617 aa6.58□□□□□ -1.36
NEDD9-216ENST00000620854 MARCH9Q86YJ5 346 aa6.58□□□□□ -1.36
NEDD9-216ENST00000620854 NANOGP1Q8N7R0 232 aa6.58□□□□□ -1.36
NEDD9-216ENST00000620854 OR4F15Q8NGB8 312 aa6.58□□□□□ -1.36
NEDD9-216ENST00000620854 IRF7Q92985 503 aa6.58□□□□□ -1.36
NEDD9-216ENST00000620854 EGLN3Q9H6Z9 239 aa6.58□□□□□ -1.36
NEDD9-216ENST00000620854 ADAP2Q9NPF8 381 aa6.58□□□□□ -1.36
NEDD9-216ENST00000620854 ATP13A2Q9NQ11 1180 aa6.58□□□□□ -1.36
NEDD9-216ENST00000620854 DIABLOQ9NR28 239 aa6.58□□□□□ -1.36
NEDD9-216ENST00000620854 C1GALT1Q9NS00 363 aa6.58□□□□□ -1.36
NEDD9-216ENST00000620854 RBFOX1Q9NWB1 397 aaKnown RBP6.58□□□□□ -1.36
NEDD9-216ENST00000620854 CNOT2Q9NZN8 540 aaKnown RBP6.58□□□□□ -1.36
NEDD9-216ENST00000620854 F5P12259 2224 aa6.58□□□□□ -1.36
NEDD9-216ENST00000620854 GBF1Q92538 1859 aa6.58□□□□□ -1.36
NEDD9-216ENST00000620854 MYO15AQ9UKN7 3530 aa6.58□□□□□ -1.36
NEDD9-216ENST00000620854 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.57□□□□□ -1.36
NEDD9-216ENST00000620854 SH3D21A4FU49 640 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 KIAA0355O15063 1070 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 ORC5O43913 435 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 IGHA2P01877 340 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 C1SP09871 688 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 OSMP13725 252 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 CTSEP14091 401 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 ATP1B2P14415 290 aaPredicted RBP6.57□□□□□ -1.36
NEDD9-216ENST00000620854 EPCAMP16422 314 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 RHCEP18577 417 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 PTGS2P35354 604 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 DCDC1P59894 354 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 RPA4Q13156 261 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 ZMYND11Q15326 602 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 ZNHIT3Q15649 155 aaPredicted RBP6.57□□□□□ -1.36
NEDD9-216ENST00000620854 PRSS53Q2L4Q9 553 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 ESCO2Q56NI9 601 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 C2orf27AQ580R0 203 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 TCTN3Q6NUS6 607 aa6.57□□□□□ -1.36
NEDD9-216ENST00000620854 IKBIPQ70UQ0 350 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms