RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 NDUFAF1Q9Y375 327 aa12.61□□□□□ -0.39
NEK3-210ENST00000620675 ALPPP05187 535 aa12.61□□□□□ -0.39
NEK3-210ENST00000620675 COX4I1P13073 169 aa12.61□□□□□ -0.39
NEK3-210ENST00000620675 CPA2P48052 419 aa12.61□□□□□ -0.39
NEK3-210ENST00000620675 IRX1P78414 480 aaPredicted RBP12.61□□□□□ -0.39
NEK3-210ENST00000620675 REP15Q6BDI9 236 aa12.61□□□□□ -0.39
NEK3-210ENST00000620675 SLC29A4Q7RTT9 530 aa12.61□□□□□ -0.39
NEK3-210ENST00000620675 OLIG3Q7RTU3 272 aa12.61□□□□□ -0.39
NEK3-210ENST00000620675 C7orf57Q8NEG2 295 aa12.61□□□□□ -0.39
NEK3-210ENST00000620675 PIK3R3Q92569 461 aa12.61□□□□□ -0.39
NEK3-210ENST00000620675 RCN3Q96D15 328 aa12.61□□□□□ -0.39
NEK3-210ENST00000620675 RASL10BQ96S79 203 aa12.61□□□□□ -0.39
NEK3-210ENST00000620675 SLC25A23Q9BV35 468 aa12.61□□□□□ -0.39
NEK3-210ENST00000620675 TMEM45AQ9NWC5 275 aa12.61□□□□□ -0.39
NEK3-210ENST00000620675 HEATR5AQ86XA9 2040 aa12.6□□□□□ -0.39
NEK3-210ENST00000620675 FAM208BQ5VWN6 2430 aa12.6□□□□□ -0.39
NEK3-210ENST00000620675 TRBV5-3A0A0A0MS03 114 aa12.6□□□□□ -0.39
NEK3-210ENST00000620675 GXYLT2A0PJZ3 443 aa12.6□□□□□ -0.39
NEK3-210ENST00000620675 FXYD1O00168 92 aa12.6□□□□□ -0.39
NEK3-210ENST00000620675 ANGPT2O15123 496 aa12.6□□□□□ -0.39
NEK3-210ENST00000620675 ERN1O75460 977 aaKnown RBP12.6□□□□□ -0.39
NEK3-210ENST00000620675 UNC5CO95185 931 aa12.6□□□□□ -0.39
NEK3-210ENST00000620675 ITGB2P05107 769 aa12.6□□□□□ -0.39
NEK3-210ENST00000620675 UQCRC2P22695 453 aa12.6□□□□□ -0.39
NEK3-210ENST00000620675 MAP3K8P41279 467 aa12.6□□□□□ -0.39
NEK3-210ENST00000620675 MAN2A2P49641 1150 aa12.6□□□□□ -0.39
NEK3-210ENST00000620675 MVDP53602 400 aa12.6□□□□□ -0.39
NEK3-210ENST00000620675 CYLC2Q14093 348 aaPredicted RBP12.6□□□□□ -0.39
NEK3-210ENST00000620675 SELPLGQ14242 412 aa12.6□□□□□ -0.39
NEK3-210ENST00000620675 CAPRIN1Q14444 709 aaKnown RBP12.6□□□□□ -0.39
NEK3-210ENST00000620675 DUSP5Q16690 384 aa12.6□□□□□ -0.39
NEK3-210ENST00000620675 COLEC12Q5KU26 742 aa12.6□□□□□ -0.39
NEK3-210ENST00000620675 EXOSC6Q5RKV6 272 aaKnown RBP12.6□□□□□ -0.39
NEK3-210ENST00000620675 AGAP7PQ5VUJ5 663 aa12.6□□□□□ -0.39
NEK3-210ENST00000620675 SAXO2Q658L1 398 aa12.6□□□□□ -0.39
NEK3-210ENST00000620675 JMJD6Q6NYC1 403 aaPredicted RBP12.6□□□□□ -0.39
NEK3-210ENST00000620675 MSANTD1Q6ZTZ1 278 aa12.6□□□□□ -0.39
NEK3-210ENST00000620675 MTERF4Q7Z6M4 381 aaKnown RBP12.6□□□□□ -0.39
NEK3-210ENST00000620675 RNF130Q86XS8 419 aa12.6□□□□□ -0.39
NEK3-210ENST00000620675 ARMC10Q8N2F6 343 aa12.6□□□□□ -0.39
NEK3-210ENST00000620675 OR8K3Q8NH51 312 aa12.6□□□□□ -0.39
NEK3-210ENST00000620675 FBXO27Q8NI29 283 aa12.6□□□□□ -0.39
NEK3-210ENST00000620675 NUBPLQ8TB37 319 aa12.6□□□□□ -0.39
NEK3-210ENST00000620675 ZFP90Q8TF47 636 aa12.6□□□□□ -0.39
NEK3-210ENST00000620675 SLC9A6Q92581 669 aa12.6□□□□□ -0.39
NEK3-210ENST00000620675 JADE3Q92613 823 aa12.6□□□□□ -0.39
NEK3-210ENST00000620675 AGAP4Q96P64 663 aa12.6□□□□□ -0.39
NEK3-210ENST00000620675 MS4A4EQ96PG1 132 aa12.6□□□□□ -0.39
NEK3-210ENST00000620675 RMND5AQ9H871 391 aa12.6□□□□□ -0.39
NEK3-210ENST00000620675 C3orf14Q9HBI5 128 aa12.6□□□□□ -0.39
NEK3-210ENST00000620675 ZNF71Q9NQZ8 489 aaPredicted RBP12.6□□□□□ -0.39
NEK3-210ENST00000620675 STMN3Q9NZ72 180 aa12.6□□□□□ -0.39
NEK3-210ENST00000620675 LEF1Q9UJU2 399 aaPredicted RBP12.6□□□□□ -0.39
NEK3-210ENST00000620675 GPR55Q9Y2T6 319 aaPredicted RBP12.6□□□□□ -0.39
NEK3-210ENST00000620675 DNAJC13O75165 2243 aa12.6□□□□□ -0.39
NEK3-210ENST00000620675 A0A096LPI6 279 aa12.6□□□□□ -0.39
NEK3-210ENST00000620675 OR6C76A6NM76 312 aa12.6□□□□□ -0.39
NEK3-210ENST00000620675 SLITRK5O94991 958 aa12.6□□□□□ -0.39
NEK3-210ENST00000620675 OR6B1O95007 311 aa12.6□□□□□ -0.39
NEK3-210ENST00000620675 WDPCPO95876 746 aa12.6□□□□□ -0.39
NEK3-210ENST00000620675 SOX3P41225 446 aa12.6□□□□□ -0.39
NEK3-210ENST00000620675 PRR5P85299 388 aa12.6□□□□□ -0.39
NEK3-210ENST00000620675 LRIF1Q5T3J3 769 aa12.6□□□□□ -0.39
NEK3-210ENST00000620675 TNFAIP8L2Q6P589 184 aaPredicted RBP12.6□□□□□ -0.39
NEK3-210ENST00000620675 LYPD8Q6UX82 237 aa12.6□□□□□ -0.39
NEK3-210ENST00000620675 ZNF227Q86WZ6 799 aa12.6□□□□□ -0.39
NEK3-210ENST00000620675 SLC5A8Q8N695 610 aa12.6□□□□□ -0.39
NEK3-210ENST00000620675 SFXN5Q8TD22 340 aa12.6□□□□□ -0.39
NEK3-210ENST00000620675 PHF12Q96QT6 1004 aa12.6□□□□□ -0.39
NEK3-210ENST00000620675 FBXO34Q9NWN3 711 aa12.6□□□□□ -0.39
NEK3-210ENST00000620675 VPS4AQ9UN37 437 aa12.6□□□□□ -0.39
NEK3-210ENST00000620675 TP53TG5Q9Y2B4 290 aa12.6□□□□□ -0.39
NEK3-210ENST00000620675 ZNF407Q9C0G0 2248 aa12.59□□□□□ -0.39
NEK3-210ENST00000620675 SLC22A2O15244 555 aa12.59□□□□□ -0.39
NEK3-210ENST00000620675 DCTN3O75935 186 aa12.59□□□□□ -0.39
NEK3-210ENST00000620675 CBX6O95503 412 aa12.59□□□□□ -0.39
NEK3-210ENST00000620675 ANP32DO95626 131 aa12.59□□□□□ -0.39
NEK3-210ENST00000620675 ADSLP30566 484 aaPredicted RBP12.59□□□□□ -0.39
NEK3-210ENST00000620675 CHI3L1P36222 383 aaPredicted RBP12.59□□□□□ -0.39
NEK3-210ENST00000620675 TRPC1P48995 793 aa12.59□□□□□ -0.39
NEK3-210ENST00000620675 LY6DQ14210 128 aa12.59□□□□□ -0.39
NEK3-210ENST00000620675 PIGGQ5H8A4 983 aa12.59□□□□□ -0.39
NEK3-210ENST00000620675 CRB2Q5IJ48 1285 aa12.59□□□□□ -0.39
NEK3-210ENST00000620675 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.59□□□□□ -0.39
NEK3-210ENST00000620675 ANGPTL8Q6UXH0 198 aa12.59□□□□□ -0.39
NEK3-210ENST00000620675 ISLR2Q6UXK2 745 aa12.59□□□□□ -0.39
NEK3-210ENST00000620675 DHDDSQ86SQ9 333 aa12.59□□□□□ -0.39
NEK3-210ENST00000620675 SLC44A2Q8IWA5 706 aaPredicted RBP12.59□□□□□ -0.39
NEK3-210ENST00000620675 DPP10Q8N608 796 aa12.59□□□□□ -0.39
NEK3-210ENST00000620675 CATSPER1Q8NEC5 780 aa12.59□□□□□ -0.39
NEK3-210ENST00000620675 TSPEARQ8WU66 669 aa12.59□□□□□ -0.39
NEK3-210ENST00000620675 HOXB13Q92826 284 aaPredicted RBP12.59□□□□□ -0.39
NEK3-210ENST00000620675 RAB8BQ92930 207 aa12.59□□□□□ -0.39
NEK3-210ENST00000620675 NEURL3Q96EH8 262 aa12.59□□□□□ -0.39
NEK3-210ENST00000620675 SLC35A4Q96G79 324 aa12.59□□□□□ -0.39
NEK3-210ENST00000620675 LCORQ96JN0 433 aaPredicted RBP12.59□□□□□ -0.39
NEK3-210ENST00000620675 BTBD9Q96Q07 612 aa12.59□□□□□ -0.39
NEK3-210ENST00000620675 SMAD5Q99717 465 aaKnown RBP12.59□□□□□ -0.39
NEK3-210ENST00000620675 TPT1P8Q9HAU6 139 aa12.59□□□□□ -0.39
NEK3-210ENST00000620675 PRODH2Q9UF12 536 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms