RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 NOP53Q9NZM5 478 aaKnown RBP7.59□□□□□ -1.19
NEK3-209ENST00000618856 ERVK-11Q9UQG0 969 aa7.59□□□□□ -1.19
NEK3-209ENST00000618856 HECTD1Q9ULT8 2610 aa7.58□□□□□ -1.2
NEK3-209ENST00000618856 A0A1B0GVC2 190 aa7.58□□□□□ -1.2
NEK3-209ENST00000618856 OR6C70A6NIJ9 312 aa7.58□□□□□ -1.2
NEK3-209ENST00000618856 LRRC3CA6NJW4 275 aa7.58□□□□□ -1.2
NEK3-209ENST00000618856 TTC36A6NLP5 189 aa7.58□□□□□ -1.2
NEK3-209ENST00000618856 CAPN14A8MX76 684 aa7.58□□□□□ -1.2
NEK3-209ENST00000618856 PDPK1O15530 556 aa7.58□□□□□ -1.2
NEK3-209ENST00000618856 ASNA1O43681 348 aa7.58□□□□□ -1.2
NEK3-209ENST00000618856 SCN2BO60939 215 aa7.58□□□□□ -1.2
NEK3-209ENST00000618856 COQ9O75208 318 aa7.58□□□□□ -1.2
NEK3-209ENST00000618856 SEMA7AO75326 666 aa7.58□□□□□ -1.2
NEK3-209ENST00000618856 PPM1BO75688 479 aa7.58□□□□□ -1.2
NEK3-209ENST00000618856 LRATO95237 230 aa7.58□□□□□ -1.2
NEK3-209ENST00000618856 IGHG3P01860 377 aa7.58□□□□□ -1.2
NEK3-209ENST00000618856 ALDOCP09972 364 aaKnown RBP7.58□□□□□ -1.2
NEK3-209ENST00000618856 LAMP1P11279 417 aa7.58□□□□□ -1.2
NEK3-209ENST00000618856 ZNF24P17028 368 aa7.58□□□□□ -1.2
NEK3-209ENST00000618856 NTSP30990 170 aa7.58□□□□□ -1.2
NEK3-209ENST00000618856 PTGDSP41222 190 aa7.58□□□□□ -1.2
NEK3-209ENST00000618856 MC3RP41968 323 aa7.58□□□□□ -1.2
NEK3-209ENST00000618856 TMED10P49755 219 aaKnown RBP7.58□□□□□ -1.2
NEK3-209ENST00000618856 DIO3P55073 304 aa7.58□□□□□ -1.2
NEK3-209ENST00000618856 WNT3P56703 355 aa7.58□□□□□ -1.2
NEK3-209ENST00000618856 NRG3P56975 720 aa7.58□□□□□ -1.2
NEK3-209ENST00000618856 ALDH6A1Q02252 535 aaKnown RBP7.58□□□□□ -1.2
NEK3-209ENST00000618856 SNTA1Q13424 505 aa7.58□□□□□ -1.2
NEK3-209ENST00000618856 UBAP2LQ14157 1087 aaKnown RBP7.58□□□□□ -1.2
NEK3-209ENST00000618856 PDCD2Q16342 344 aaPredicted RBP7.58□□□□□ -1.2
NEK3-209ENST00000618856 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.58□□□□□ -1.2
NEK3-209ENST00000618856 EIF2S3LQ2VIR3 472 aaKnown RBP7.58□□□□□ -1.2
NEK3-209ENST00000618856 TBCELQ5QJ74 424 aa7.58□□□□□ -1.2
NEK3-209ENST00000618856 C6orf163Q5TEZ5 329 aa7.58□□□□□ -1.2
NEK3-209ENST00000618856 FNDC7Q5VTL7 733 aa7.58□□□□□ -1.2
NEK3-209ENST00000618856 TMEM107Q6UX40 140 aa7.58□□□□□ -1.2
NEK3-209ENST00000618856 ZNF551Q7Z340 670 aaPredicted RBP7.58□□□□□ -1.2
NEK3-209ENST00000618856 NUP54Q7Z3B4 507 aa7.58□□□□□ -1.2
NEK3-209ENST00000618856 WDR75Q8IWA0 830 aaKnown RBP7.58□□□□□ -1.2
NEK3-209ENST00000618856 SLC34A3Q8N130 599 aa7.58□□□□□ -1.2
NEK3-209ENST00000618856 FAM26EQ8N5C1 309 aa7.58□□□□□ -1.2
NEK3-209ENST00000618856 KRTCAP2Q8N6L1 136 aa7.58□□□□□ -1.2
NEK3-209ENST00000618856 OR8J2Q8NGG1 315 aa7.58□□□□□ -1.2
NEK3-209ENST00000618856 CLHC1Q8NHS4 586 aa7.58□□□□□ -1.2
NEK3-209ENST00000618856 PIWIL2Q8TC59 973 aaKnown RBP7.58□□□□□ -1.2
NEK3-209ENST00000618856 MGARPQ8TDB4 240 aa7.58□□□□□ -1.2
NEK3-209ENST00000618856 NUDT8Q8WV74 236 aa7.58□□□□□ -1.2
NEK3-209ENST00000618856 GFM2Q969S9 779 aaKnown RBP7.58□□□□□ -1.2
NEK3-209ENST00000618856 PPCDCQ96CD2 204 aa7.58□□□□□ -1.2
NEK3-209ENST00000618856 ZBED6CLQ96FA7 236 aaPredicted RBP7.58□□□□□ -1.2
NEK3-209ENST00000618856 PAIP2Q9BPZ3 127 aaKnown RBP7.58□□□□□ -1.2
NEK3-209ENST00000618856 C1orf50Q9BV19 199 aa7.58□□□□□ -1.2
NEK3-209ENST00000618856 TTTY12Q9BZ98 90 aa7.58□□□□□ -1.2
NEK3-209ENST00000618856 NUF2Q9BZD4 464 aa7.58□□□□□ -1.2
NEK3-209ENST00000618856 BHLHE41Q9C0J9 482 aaPredicted RBP7.58□□□□□ -1.2
NEK3-209ENST00000618856 UBQLN3Q9H347 655 aa7.58□□□□□ -1.2
NEK3-209ENST00000618856 IL1RL2Q9HB29 575 aa7.58□□□□□ -1.2
NEK3-209ENST00000618856 FOLH1BQ9HBA9 442 aa7.58□□□□□ -1.2
NEK3-209ENST00000618856 SIRT3Q9NTG7 399 aaPredicted RBP7.58□□□□□ -1.2
NEK3-209ENST00000618856 TAS2R9Q9NYW1 312 aa7.58□□□□□ -1.2
NEK3-209ENST00000618856 SEC14L3Q9UDX4 400 aa7.58□□□□□ -1.2
NEK3-209ENST00000618856 BCAP29Q9UHQ4 241 aa7.58□□□□□ -1.2
NEK3-209ENST00000618856 MAPRE3Q9UPY8 281 aa7.58□□□□□ -1.2
NEK3-209ENST00000618856 EIF3LQ9Y262 564 aaKnown RBP7.58□□□□□ -1.2
NEK3-209ENST00000618856 TP53I11O14683 189 aa7.57□□□□□ -1.2
NEK3-209ENST00000618856 AKAP10O43572 662 aa7.57□□□□□ -1.2
NEK3-209ENST00000618856 UGT2B11O75310 529 aa7.57□□□□□ -1.2
NEK3-209ENST00000618856 NME6O75414 186 aaPredicted RBP7.57□□□□□ -1.2
NEK3-209ENST00000618856 ERN1O75460 977 aaKnown RBP7.57□□□□□ -1.2
NEK3-209ENST00000618856 NKX2-2O95096 273 aa7.57□□□□□ -1.2
NEK3-209ENST00000618856 UNC5CO95185 931 aa7.57□□□□□ -1.2
NEK3-209ENST00000618856 SNX4O95219 450 aa7.57□□□□□ -1.2
NEK3-209ENST00000618856 P04436 131 aa7.57□□□□□ -1.2
NEK3-209ENST00000618856 DDX5P17844 614 aaKnown RBP7.57□□□□□ -1.2
NEK3-209ENST00000618856 LBPP18428 481 aa7.57□□□□□ -1.2
NEK3-209ENST00000618856 HPCAL1P37235 193 aa7.57□□□□□ -1.2
NEK3-209ENST00000618856 PIGAP37287 484 aa7.57□□□□□ -1.2
NEK3-209ENST00000618856 CASP3P42574 277 aa7.57□□□□□ -1.2
NEK3-209ENST00000618856 DNASE1L1P49184 302 aa7.57□□□□□ -1.2
NEK3-209ENST00000618856 MRPL19P49406 292 aaKnown RBP7.57□□□□□ -1.2
NEK3-209ENST00000618856 CDK9P50750 372 aaKnown RBP7.57□□□□□ -1.2
NEK3-209ENST00000618856 PNLIPRP2P54317 469 aa7.57□□□□□ -1.2
NEK3-209ENST00000618856 GAS1P54826 345 aa7.57□□□□□ -1.2
NEK3-209ENST00000618856 CORO7P57737 925 aa7.57□□□□□ -1.2
NEK3-209ENST00000618856 FBXW4P57775 412 aa7.57□□□□□ -1.2
NEK3-209ENST00000618856 GPR85P60893 370 aa7.57□□□□□ -1.2
NEK3-209ENST00000618856 PPP2R2AP63151 447 aa7.57□□□□□ -1.2
NEK3-209ENST00000618856 PHC1P78364 1004 aa7.57□□□□□ -1.2
NEK3-209ENST00000618856 SRSF11Q05519 484 aaKnown RBP7.57□□□□□ -1.2
NEK3-209ENST00000618856 CYP27C1Q4G0S4 372 aa7.57□□□□□ -1.2
NEK3-209ENST00000618856 C4orf17Q53FE4 359 aa7.57□□□□□ -1.2
NEK3-209ENST00000618856 CPTPQ5TA50 214 aa7.57□□□□□ -1.2
NEK3-209ENST00000618856 HLA-DQA1Q5Y7H0 255 aa7.57□□□□□ -1.2
NEK3-209ENST00000618856 AP1ARQ63HQ0 302 aa7.57□□□□□ -1.2
NEK3-209ENST00000618856 ZCCHC12Q6PEW1 402 aa7.57□□□□□ -1.2
NEK3-209ENST00000618856 TMEM64Q6YI46 380 aa7.57□□□□□ -1.2
NEK3-209ENST00000618856 GK5Q6ZS86 529 aa7.57□□□□□ -1.2
NEK3-209ENST00000618856 SPATA19Q7Z5L4 167 aa7.57□□□□□ -1.2
NEK3-209ENST00000618856 TMEM251Q8N6I4 163 aa7.57□□□□□ -1.2
NEK3-209ENST00000618856 OR7A2PQ8NGA2 310 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms