RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 PPP3R2Q96LZ3 170 aa14.69□□□□□ -0.06
BRCA1-228ENST00000618469 JSRP1Q96MG2 331 aaPredicted RBP14.69□□□□□ -0.06
BRCA1-228ENST00000618469 PAIP2Q9BPZ3 127 aaKnown RBP14.69□□□□□ -0.06
BRCA1-228ENST00000618469 DOHHQ9BU89 302 aa14.69□□□□□ -0.06
BRCA1-228ENST00000618469 C1orf50Q9BV19 199 aa14.69□□□□□ -0.06
BRCA1-228ENST00000618469 DEFB127Q9H1M4 99 aa14.69□□□□□ -0.06
BRCA1-228ENST00000618469 ZDHHC11Q9H8X9 412 aa14.69□□□□□ -0.06
BRCA1-228ENST00000618469 IL1RL2Q9HB29 575 aa14.69□□□□□ -0.06
BRCA1-228ENST00000618469 CNIH4Q9P003 139 aa14.69□□□□□ -0.06
BRCA1-228ENST00000618469 SUCOQ9UBS9 1254 aaKnown RBP14.69□□□□□ -0.06
BRCA1-228ENST00000618469 CNOT11Q9UKZ1 510 aaKnown RBP14.69□□□□□ -0.06
BRCA1-228ENST00000618469 BOKQ9UMX3 212 aaPredicted RBP14.69□□□□□ -0.06
BRCA1-228ENST00000618469 ZNF835Q9Y2P0 537 aa14.69□□□□□ -0.06
BRCA1-228ENST00000618469 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.69□□□□□ -0.06
BRCA1-228ENST00000618469 A0A1B0GTH9 108 aa14.68□□□□□ -0.06
BRCA1-228ENST00000618469 FRG2CA6NGY1 282 aa14.68□□□□□ -0.06
BRCA1-228ENST00000618469 ACOX3O15254 700 aa14.68□□□□□ -0.06
BRCA1-228ENST00000618469 PDPK1O15530 556 aa14.68□□□□□ -0.06
BRCA1-228ENST00000618469 PLOD3O60568 738 aa14.68□□□□□ -0.06
BRCA1-228ENST00000618469 PEX11AO75192 247 aa14.68□□□□□ -0.06
BRCA1-228ENST00000618469 COQ9O75208 318 aa14.68□□□□□ -0.06
BRCA1-228ENST00000618469 BCAS2O75934 225 aaPredicted RBP14.68□□□□□ -0.06
BRCA1-228ENST00000618469 PDE9AO76083 593 aa14.68□□□□□ -0.06
BRCA1-228ENST00000618469 MAPK1P28482 360 aa14.68□□□□□ -0.06
BRCA1-228ENST00000618469 ABCE1P61221 599 aaKnown RBP14.68□□□□□ -0.06
BRCA1-228ENST00000618469 DCAF7P61962 342 aa14.68□□□□□ -0.06
BRCA1-228ENST00000618469 FOXO1Q12778 655 aa14.68□□□□□ -0.06
BRCA1-228ENST00000618469 PDCD2Q16342 344 aaPredicted RBP14.68□□□□□ -0.06
BRCA1-228ENST00000618469 ATP6AP1LQ52LC2 224 aa14.68□□□□□ -0.06
BRCA1-228ENST00000618469 HHATQ5VTY9 493 aa14.68□□□□□ -0.06
BRCA1-228ENST00000618469 BICRALQ6AI39 1079 aa14.68□□□□□ -0.06
BRCA1-228ENST00000618469 Q6ZPB1 254 aaPredicted RBP14.68□□□□□ -0.06
BRCA1-228ENST00000618469 RGS9BPQ6ZS82 235 aa14.68□□□□□ -0.06
BRCA1-228ENST00000618469 ZNF781Q8N8C0 355 aa14.68□□□□□ -0.06
BRCA1-228ENST00000618469 SPPL2AQ8TCT8 520 aa14.68□□□□□ -0.06
BRCA1-228ENST00000618469 PPCDCQ96CD2 204 aa14.68□□□□□ -0.06
BRCA1-228ENST00000618469 HSPBAP1Q96EW2 488 aa14.68□□□□□ -0.06
BRCA1-228ENST00000618469 ZNF597Q96LX8 424 aa14.68□□□□□ -0.06
BRCA1-228ENST00000618469 C3orf30Q96M34 536 aa14.68□□□□□ -0.06
BRCA1-228ENST00000618469 AMDHD1Q96NU7 426 aa14.68□□□□□ -0.06
BRCA1-228ENST00000618469 BTBD9Q96Q07 612 aa14.68□□□□□ -0.06
BRCA1-228ENST00000618469 GLIPR2Q9H4G4 154 aa14.68□□□□□ -0.06
BRCA1-228ENST00000618469 REEP4Q9H6H4 257 aa14.68□□□□□ -0.06
BRCA1-228ENST00000618469 ZNF703Q9H7S9 590 aaPredicted RBP14.68□□□□□ -0.06
BRCA1-228ENST00000618469 ZNF395Q9H8N7 513 aaPredicted RBP14.68□□□□□ -0.06
BRCA1-228ENST00000618469 FOLH1BQ9HBA9 442 aa14.68□□□□□ -0.06
BRCA1-228ENST00000618469 DDX18Q9NVP1 670 aaKnown RBP14.68□□□□□ -0.06
BRCA1-228ENST00000618469 TAS2R7Q9NYW3 318 aa14.68□□□□□ -0.06
BRCA1-228ENST00000618469 BAIAP2L1Q9UHR4 511 aa14.68□□□□□ -0.06
BRCA1-228ENST00000618469 LIPGQ9Y5X9 500 aa14.68□□□□□ -0.06
BRCA1-228ENST00000618469 TMEM120BA0PK00 339 aa14.67□□□□□ -0.06
BRCA1-228ENST00000618469 LRRC3CA6NJW4 275 aa14.67□□□□□ -0.06
BRCA1-228ENST00000618469 PRRG2O14669 202 aa14.67□□□□□ -0.06
BRCA1-228ENST00000618469 ERN1O75460 977 aaKnown RBP14.67□□□□□ -0.06
BRCA1-228ENST00000618469 PPM1BO75688 479 aa14.67□□□□□ -0.06
BRCA1-228ENST00000618469 SLITRK5O94991 958 aa14.67□□□□□ -0.06
BRCA1-228ENST00000618469 TPOP07202 933 aa14.67□□□□□ -0.06
BRCA1-228ENST00000618469 CELA3AP09093 270 aa14.67□□□□□ -0.06
BRCA1-228ENST00000618469 BCKDHAP12694 445 aa14.67□□□□□ -0.06
BRCA1-228ENST00000618469 PTGS2P35354 604 aa14.67□□□□□ -0.06
BRCA1-228ENST00000618469 PPICP45877 212 aa14.67□□□□□ -0.06
BRCA1-228ENST00000618469 ASMTP46597 345 aa14.67□□□□□ -0.06
BRCA1-228ENST00000618469 CORO7P57737 925 aa14.67□□□□□ -0.06
BRCA1-228ENST00000618469 RPP38P78345 283 aaKnown RBP14.67□□□□□ -0.06
BRCA1-228ENST00000618469 HSPB3Q12988 150 aa14.67□□□□□ -0.06
BRCA1-228ENST00000618469 ZNF385BQ569K4 471 aa14.67□□□□□ -0.06
BRCA1-228ENST00000618469 TBCELQ5QJ74 424 aa14.67□□□□□ -0.06
BRCA1-228ENST00000618469 ARHGAP11AQ6P4F7 1023 aa14.67□□□□□ -0.06
BRCA1-228ENST00000618469 CD163Q86VB7 1156 aa14.67□□□□□ -0.06
BRCA1-228ENST00000618469 LIX1Q8N485 282 aa14.67□□□□□ -0.06
BRCA1-228ENST00000618469 FNDC5Q8NAU1 212 aa14.67□□□□□ -0.06
BRCA1-228ENST00000618469 MGARPQ8TDB4 240 aa14.67□□□□□ -0.06
BRCA1-228ENST00000618469 CIDECQ96AQ7 238 aaPredicted RBP14.67□□□□□ -0.06
BRCA1-228ENST00000618469 TUBGCP3Q96CW5 907 aa14.67□□□□□ -0.06
BRCA1-228ENST00000618469 ZNF764Q96H86 408 aaPredicted RBP14.67□□□□□ -0.06
BRCA1-228ENST00000618469 CCDC120Q96HB5 630 aa14.67□□□□□ -0.06
BRCA1-228ENST00000618469 PPP1R36Q96LQ0 422 aa14.67□□□□□ -0.06
BRCA1-228ENST00000618469 VSTM2LQ96N03 204 aa14.67□□□□□ -0.06
BRCA1-228ENST00000618469 RILPQ96NA2 401 aa14.67□□□□□ -0.06
BRCA1-228ENST00000618469 PROK2Q9HC23 129 aa14.67□□□□□ -0.06
BRCA1-228ENST00000618469 ZFP64Q9NPA5 681 aa14.67□□□□□ -0.06
BRCA1-228ENST00000618469 PLSCR2Q9NRY7 297 aa14.67□□□□□ -0.06
BRCA1-228ENST00000618469 NCKAP5O14513 1909 aa14.66□□□□□ -0.06
BRCA1-228ENST00000618469 DCHS2Q6V1P9 2916 aa14.66□□□□□ -0.06
BRCA1-228ENST00000618469 CCDC168Q8NDH2 2452 aa14.66□□□□□ -0.06
BRCA1-228ENST00000618469 ABCB1P08183 1280 aaPredicted RBP14.66□□□□□ -0.06
BRCA1-228ENST00000618469 ESRRAP11474 423 aaPredicted RBP14.66□□□□□ -0.06
BRCA1-228ENST00000618469 DRD5P21918 477 aa14.66□□□□□ -0.06
BRCA1-228ENST00000618469 GRK2P25098 689 aa14.66□□□□□ -0.06
BRCA1-228ENST00000618469 GPC1P35052 558 aa14.66□□□□□ -0.06
BRCA1-228ENST00000618469 HPCAL1P37235 193 aa14.66□□□□□ -0.06
BRCA1-228ENST00000618469 SLC1A6P48664 564 aa14.66□□□□□ -0.06
BRCA1-228ENST00000618469 MASP1P48740 699 aa14.66□□□□□ -0.06
BRCA1-228ENST00000618469 MAGOHP61326 146 aaKnown RBP14.66□□□□□ -0.06
BRCA1-228ENST00000618469 PDE7AQ13946 482 aa14.66□□□□□ -0.06
BRCA1-228ENST00000618469 CASP8Q14790 479 aa14.66□□□□□ -0.06
BRCA1-228ENST00000618469 PTGR1Q14914 329 aa14.66□□□□□ -0.06
BRCA1-228ENST00000618469 DESI1Q6ICB0 168 aa14.66□□□□□ -0.06
BRCA1-228ENST00000618469 MTFR2Q6P444 385 aa14.66□□□□□ -0.06
BRCA1-228ENST00000618469 PAOXQ6QHF9 649 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms