RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 CSNK1G2P78368 415 aa10.24□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 EXOC3L2Q2M3D2 409 aa10.24□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 POM121L1PQ3SYA9 428 aa10.24□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 TMEM201Q5SNT2 666 aa10.24□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 IER5LQ5T953 404 aa10.24□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 RNF130Q86XS8 419 aa10.24□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 ATP6V1C2Q8NEY4 427 aa10.24□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 NFKBIDQ8NI38 313 aa10.24□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 NR4A3Q92570 626 aa10.24□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 CRELD1Q96HD1 420 aa10.24□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 FRMD6Q96NE9 622 aa10.24□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 SCML1Q9UN30 329 aa10.24□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 STON1Q9Y6Q2 735 aa10.24□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 CENPBD1B2RD01 187 aa10.24□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 RFX2P48378 723 aa10.24□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 RPS21P63220 83 aaKnown RBP10.24□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 TUBA1BP68363 451 aa10.24□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 RPL6Q02878 288 aaKnown RBP10.24□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 CDC20Q12834 499 aa10.24□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 TATDN3Q17R31 274 aa10.24□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 ZSWIM7Q19AV6 140 aa10.24□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 ZNF697Q5TEC3 545 aa10.24□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 TUBA1AQ71U36 451 aa10.24□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 SLC46A3Q7Z3Q1 461 aa10.24□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 DNAJC22Q8N4W6 341 aa10.24□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 CDCA4Q9BXL8 241 aa10.24□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 NXF2Q9GZY0 626 aaKnown RBP10.24□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 KIR3DX1Q9H7L2 352 aa10.24□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 FTSJ1Q9UET6 329 aa10.24□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 IGLON5A6NGN9 336 aa10.23□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 ZAR1LA6NP61 321 aa10.23□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 CLCA1A8K7I4 914 aa10.23□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 PCDH17O14917 1159 aa10.23□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 PDPK1O15530 556 aa10.23□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 CDK1P06493 297 aa10.23□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 RAB28P51157 221 aa10.23□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 SNRPGP62308 76 aaKnown RBP10.23□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 SCN1BQ07699 218 aa10.23□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 TANGO2Q6ICL3 276 aa10.23□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 C2orf73Q8N5S3 287 aaPredicted RBP10.23□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 LINC01555Q8NAE3 123 aa10.23□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 ZNF740Q8NDX6 193 aa10.23□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 BEST4Q8NFU0 473 aa10.23□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 C9orf43Q8TAL5 461 aaPredicted RBP10.23□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 SLC7A6Q92536 515 aa10.23□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 RIT1Q92963 219 aa10.23□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 ZBED6CLQ96FA7 236 aaPredicted RBP10.23□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 SDHCQ99643 169 aaPredicted RBP10.23□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 LGR4Q9BXB1 951 aa10.23□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 SLAMF7Q9NQ25 335 aa10.23□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 SNX7Q9UNH6 387 aa10.23□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 CCDC88CQ9P219 2028 aa10.23□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 ADAP00813 363 aa10.23□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 APODP05090 189 aa10.23□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 PTGER1P34995 402 aa10.23□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 CHI3L1P36222 383 aaPredicted RBP10.23□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 KRR1Q13601 381 aaKnown RBP10.23□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 DOC2BQ14184 412 aa10.23□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 OR4C11Q6IEV9 310 aa10.23□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 PLEKHM3Q6ZWE6 761 aa10.23□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 OR2A1Q8NGT9 310 aa10.23□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 PIGKQ92643 395 aa10.23□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 TM9SF2Q99805 663 aa10.23□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 TBC1D17Q9HA65 648 aa10.23□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 PHPT1Q9NRX4 125 aaPredicted RBP10.23□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 NTMQ9P121 344 aa10.23□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 PCOLCE2Q9UKZ9 415 aa10.23□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 SPATA2Q9UM82 520 aa10.23□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 ZFR2Q9UPR6 939 aaKnown RBP10.23□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 KLK4Q9Y5K2 254 aa10.23□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 HEBP2Q9Y5Z4 205 aa10.23□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 LRIT2A6NDA9 550 aa10.23□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 TBC1D3BA6NDS4 549 aa10.23□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 NDUFS4O43181 175 aa10.23□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 EPHX1P07099 455 aa10.23□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 KIR2DL1P43626 348 aaPredicted RBP10.23□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 KCNJ5P48544 419 aa10.23□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 SMIM11AP58511 58 aa10.23□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 RPS26P62854 115 aaKnown RBP10.23□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 HYAL2Q12891 473 aa10.23□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 FGFBP1Q14512 234 aa10.23□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 MLF2Q15773 248 aaPredicted RBP10.23□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 CHMP1BQ7LBR1 199 aa10.23□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 OLIG3Q7RTU3 272 aa10.23□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 TMCO6Q96DC7 493 aa10.23□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 ZNF354BQ96LW1 612 aa10.23□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 MKRN2Q9H000 416 aaKnown RBP10.23□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 WDR26Q9H7D7 661 aa10.23□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 MIEF1Q9NQG6 463 aa10.23□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 ZNF226Q9NYT6 803 aa10.23□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 MKLN1Q9UL63 735 aa10.23□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 IGKV1-8A0A0C4DH67 115 aa10.22□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 PRAMEF33A0A0G2JMD5 474 aa10.22□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 ISM1B1AKI9 464 aa10.22□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 PRAMEF10O60809 474 aa10.22□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 ADRA2AP08913 450 aa10.22□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 SLC35G4P0C7Q5 338 aa10.22□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 CNR2P34972 360 aa10.22□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 GPC1P35052 558 aa10.22□□□□□ -0.77
SENP3-EIF4A1-201ENST00000614237 ILKQ13418 452 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms