RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 UBFD1O14562 309 aaKnown RBP20.78■□□□□ 0.92
FAM228B-208ENST00000613899 PLIN3O60664 434 aa20.78■□□□□ 0.92
FAM228B-208ENST00000613899 CAPN3P20807 821 aa20.78■□□□□ 0.92
FAM228B-208ENST00000613899 CRHR1P34998 444 aa20.78■□□□□ 0.92
FAM228B-208ENST00000613899 ADH7P40394 386 aa20.78■□□□□ 0.92
FAM228B-208ENST00000613899 NAGLUP54802 743 aa20.78■□□□□ 0.92
FAM228B-208ENST00000613899 FOXA1P55317 472 aa20.78■□□□□ 0.92
FAM228B-208ENST00000613899 DNAJB13P59910 316 aa20.78■□□□□ 0.92
FAM228B-208ENST00000613899 TOMM20Q15388 145 aa20.78■□□□□ 0.92
FAM228B-208ENST00000613899 SF3B4Q15427 424 aaKnown RBP eCLIP20.78■□□□□ 0.92
FAM228B-208ENST00000613899 CEBPEQ15744 281 aa20.78■□□□□ 0.92
FAM228B-208ENST00000613899 SLC25A35Q3KQZ1 300 aa20.78■□□□□ 0.92
FAM228B-208ENST00000613899 TIGD3Q6B0B8 471 aa20.78■□□□□ 0.92
FAM228B-208ENST00000613899 SCIMPQ6UWF3 145 aa20.78■□□□□ 0.92
FAM228B-208ENST00000613899 DMRTC2Q8IXT2 367 aaPredicted RBP20.78■□□□□ 0.92
FAM228B-208ENST00000613899 PM20D2Q8IYS1 436 aa20.78■□□□□ 0.92
FAM228B-208ENST00000613899 FAM9CQ8IZT9 166 aa20.78■□□□□ 0.92
FAM228B-208ENST00000613899 CLYBLQ8N0X4 340 aa20.78■□□□□ 0.92
FAM228B-208ENST00000613899 CCDC63Q8NA47 563 aa20.78■□□□□ 0.92
FAM228B-208ENST00000613899 NTNG2Q96CW9 530 aa20.78■□□□□ 0.92
FAM228B-208ENST00000613899 BTBD9Q96Q07 612 aa20.78■□□□□ 0.92
FAM228B-208ENST00000613899 MCCC2Q9HCC0 563 aa20.78■□□□□ 0.92
FAM228B-208ENST00000613899 CSMD2Q7Z408 3487 aa20.77■□□□□ 0.92
FAM228B-208ENST00000613899 SMIM23A6NLE4 172 aa20.77■□□□□ 0.92
FAM228B-208ENST00000613899 AHRRA9YTQ3 701 aa20.77■□□□□ 0.92
FAM228B-208ENST00000613899 COPEO14579 308 aa20.77■□□□□ 0.92
FAM228B-208ENST00000613899 GNB5O14775 395 aa20.77■□□□□ 0.92
FAM228B-208ENST00000613899 SNPHO15079 494 aa20.77■□□□□ 0.92
FAM228B-208ENST00000613899 ABCB7O75027 752 aa20.77■□□□□ 0.92
FAM228B-208ENST00000613899 DDCP20711 480 aa20.77■□□□□ 0.92
FAM228B-208ENST00000613899 PTPN6P29350 595 aa20.77■□□□□ 0.92
FAM228B-208ENST00000613899 MPIP34949 423 aa20.77■□□□□ 0.92
FAM228B-208ENST00000613899 ANGPTL8Q6UXH0 198 aa20.77■□□□□ 0.92
FAM228B-208ENST00000613899 KAT2AQ92830 837 aa20.77■□□□□ 0.92
FAM228B-208ENST00000613899 NODALQ96S42 347 aa20.77■□□□□ 0.92
FAM228B-208ENST00000613899 PRDM14Q9GZV8 571 aa20.77■□□□□ 0.92
FAM228B-208ENST00000613899 STMN4Q9H169 189 aaPredicted RBP20.77■□□□□ 0.92
FAM228B-208ENST00000613899 L2HGDHQ9H9P8 463 aa20.77■□□□□ 0.92
FAM228B-208ENST00000613899 MID2Q9UJV3 735 aa20.77■□□□□ 0.92
FAM228B-208ENST00000613899 GPR55Q9Y2T6 319 aaPredicted RBP20.77■□□□□ 0.92
FAM228B-208ENST00000613899 OTOGQ6ZRI0 2925 aa20.76■□□□□ 0.91
FAM228B-208ENST00000613899 PRAMEF25A6NGN4 478 aa20.76■□□□□ 0.91
FAM228B-208ENST00000613899 OR6C70A6NIJ9 312 aa20.76■□□□□ 0.91
FAM228B-208ENST00000613899 HSPB2A8KAH6 182 aa20.76■□□□□ 0.91
FAM228B-208ENST00000613899 UGT2B11O75310 529 aa20.76■□□□□ 0.91
FAM228B-208ENST00000613899 RSL1D1O76021 490 aaKnown RBP20.76■□□□□ 0.91
FAM228B-208ENST00000613899 HSPB2Q16082 182 aa20.76■□□□□ 0.91
FAM228B-208ENST00000613899 ACSF3Q4G176 576 aaPredicted RBP20.76■□□□□ 0.91
FAM228B-208ENST00000613899 NHSL2Q5HYW2 709 aa20.76■□□□□ 0.91
FAM228B-208ENST00000613899 TRIM46Q7Z4K8 759 aa20.76■□□□□ 0.91
FAM228B-208ENST00000613899 CDC26Q8NHZ8 85 aa20.76■□□□□ 0.91
FAM228B-208ENST00000613899 FAM76AQ8TAV0 307 aa20.76■□□□□ 0.91
FAM228B-208ENST00000613899 EPS8L3Q8TE67 593 aaKnown RBP20.76■□□□□ 0.91
FAM228B-208ENST00000613899 TMCO6Q96DC7 493 aa20.76■□□□□ 0.91
FAM228B-208ENST00000613899 VSTM2LQ96N03 204 aa20.76■□□□□ 0.91
FAM228B-208ENST00000613899 COL21A1Q96P44 957 aa20.76■□□□□ 0.91
FAM228B-208ENST00000613899 BBS4Q96RK4 519 aa20.76■□□□□ 0.91
FAM228B-208ENST00000613899 TIMP4Q99727 224 aa20.76■□□□□ 0.91
FAM228B-208ENST00000613899 MIEF1Q9NQG6 463 aa20.76■□□□□ 0.91
FAM228B-208ENST00000613899 RRAGDQ9NQL2 400 aaPredicted RBP20.76■□□□□ 0.91
FAM228B-208ENST00000613899 OXSMQ9NWU1 459 aa20.76■□□□□ 0.91
FAM228B-208ENST00000613899 TACC2O95359 2948 aa20.76■□□□□ 0.91
FAM228B-208ENST00000613899 PLOD3O60568 738 aa20.75■□□□□ 0.91
FAM228B-208ENST00000613899 ICOSLGO75144 302 aa20.75■□□□□ 0.91
FAM228B-208ENST00000613899 ERN1O75460 977 aaKnown RBP20.75■□□□□ 0.91
FAM228B-208ENST00000613899 SLITRK5O94991 958 aa20.75■□□□□ 0.91
FAM228B-208ENST00000613899 CPA3P15088 417 aa20.75■□□□□ 0.91
FAM228B-208ENST00000613899 KRT4P19013 534 aa20.75■□□□□ 0.91
FAM228B-208ENST00000613899 GCKP35557 465 aa20.75■□□□□ 0.91
FAM228B-208ENST00000613899 KRT20P35900 424 aa20.75■□□□□ 0.91
FAM228B-208ENST00000613899 LIPMQ5VYY2 423 aa20.75■□□□□ 0.91
FAM228B-208ENST00000613899 VASNQ6EMK4 673 aa20.75■□□□□ 0.91
FAM228B-208ENST00000613899 DESI1Q6ICB0 168 aa20.75■□□□□ 0.91
FAM228B-208ENST00000613899 WDR53Q7Z5U6 358 aaPredicted RBP20.75■□□□□ 0.91
FAM228B-208ENST00000613899 LACC1Q8IV20 430 aa20.75■□□□□ 0.91
FAM228B-208ENST00000613899 TMBIM1Q969X1 311 aa20.75■□□□□ 0.91
FAM228B-208ENST00000613899 DTNBP1Q96EV8 351 aa20.75■□□□□ 0.91
FAM228B-208ENST00000613899 SLC35A4Q96G79 324 aa20.75■□□□□ 0.91
FAM228B-208ENST00000613899 GALNT9Q9HCQ5 603 aa20.75■□□□□ 0.91
FAM228B-208ENST00000613899 MYNNQ9NPC7 610 aa20.75■□□□□ 0.91
FAM228B-208ENST00000613899 TAS2R9Q9NYW1 312 aa20.75■□□□□ 0.91
FAM228B-208ENST00000613899 KCNN3Q9UGI6 736 aa20.75■□□□□ 0.91
FAM228B-208ENST00000613899 WBP11Q9Y2W2 641 aaKnown RBP20.75■□□□□ 0.91
FAM228B-208ENST00000613899 SLC6A5Q9Y345 797 aa20.75■□□□□ 0.91
FAM228B-208ENST00000613899 COQ9O75208 318 aa20.74■□□□□ 0.91
FAM228B-208ENST00000613899 REM1O75628 298 aa20.74■□□□□ 0.91
FAM228B-208ENST00000613899 EPPINO95925 133 aa20.74■□□□□ 0.91
FAM228B-208ENST00000613899 CT45A8P0DMV1 189 aa20.74■□□□□ 0.91
FAM228B-208ENST00000613899 CT45A9P0DMV2 189 aa20.74■□□□□ 0.91
FAM228B-208ENST00000613899 UROSP10746 265 aa20.74■□□□□ 0.91
FAM228B-208ENST00000613899 PTGDSP41222 190 aa20.74■□□□□ 0.91
FAM228B-208ENST00000613899 C2orf80Q0P641 193 aa20.74■□□□□ 0.91
FAM228B-208ENST00000613899 EFR3AQ14156 821 aa20.74■□□□□ 0.91
FAM228B-208ENST00000613899 EIPR1Q53HC9 387 aa20.74■□□□□ 0.91
FAM228B-208ENST00000613899 CT45A2Q5DJT8 189 aa20.74■□□□□ 0.91
FAM228B-208ENST00000613899 WIPI1Q5MNZ9 446 aaPredicted RBP20.74■□□□□ 0.91
FAM228B-208ENST00000613899 LIX1LQ8IVB5 337 aa20.74■□□□□ 0.91
FAM228B-208ENST00000613899 FAM83FQ8NEG4 500 aaPredicted RBP20.74■□□□□ 0.91
FAM228B-208ENST00000613899 METTL2AQ96IZ6 378 aaKnown RBP20.74■□□□□ 0.91
FAM228B-208ENST00000613899 UGT2B28Q9BY64 529 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms