RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 NNATQ16517 81 aa12.25□□□□□ -0.45
MDC1-209ENST00000613547 MAPKAPK3Q16644 382 aa12.25□□□□□ -0.45
MDC1-209ENST00000613547 TIGD2Q4W5G0 525 aa12.25□□□□□ -0.45
MDC1-209ENST00000613547 ZNF766Q5HY98 468 aa12.25□□□□□ -0.45
MDC1-209ENST00000613547 ZNF468Q5VIY5 522 aaPredicted RBP12.25□□□□□ -0.45
MDC1-209ENST00000613547 SPINK14Q6IE38 97 aa12.25□□□□□ -0.45
MDC1-209ENST00000613547 SLC25A25Q6KCM7 469 aa12.25□□□□□ -0.45
MDC1-209ENST00000613547 CGB2Q6NT52 195 aa12.25□□□□□ -0.45
MDC1-209ENST00000613547 ZCCHC12Q6PEW1 402 aa12.25□□□□□ -0.45
MDC1-209ENST00000613547 SPATA21Q7Z572 469 aa12.25□□□□□ -0.45
MDC1-209ENST00000613547 ANKRD46Q86W74 232 aa12.25□□□□□ -0.45
MDC1-209ENST00000613547 SLC44A2Q8IWA5 706 aaPredicted RBP12.25□□□□□ -0.45
MDC1-209ENST00000613547 CLECL1Q8IZS7 167 aa12.25□□□□□ -0.45
MDC1-209ENST00000613547 CDRT4Q8N9R6 151 aa12.25□□□□□ -0.45
MDC1-209ENST00000613547 GOLM1Q8NBJ4 401 aa12.25□□□□□ -0.45
MDC1-209ENST00000613547 FAM98AQ8NCA5 519 aaKnown RBP12.25□□□□□ -0.45
MDC1-209ENST00000613547 MDS2Q8NDY4 140 aa12.25□□□□□ -0.45
MDC1-209ENST00000613547 FAM13CQ8NE31 585 aa12.25□□□□□ -0.45
MDC1-209ENST00000613547 OR9I1Q8NGQ6 314 aa12.25□□□□□ -0.45
MDC1-209ENST00000613547 SPACA9Q96E40 222 aaPredicted RBP12.25□□□□□ -0.45
MDC1-209ENST00000613547 FAM120BQ96EK7 910 aaKnown RBP12.25□□□□□ -0.45
MDC1-209ENST00000613547 CCDC115Q96NT0 180 aa12.25□□□□□ -0.45
MDC1-209ENST00000613547 PANX1Q96RD7 426 aa12.25□□□□□ -0.45
MDC1-209ENST00000613547 CXorf36Q9H7Y0 433 aa12.25□□□□□ -0.45
MDC1-209ENST00000613547 SIRT3Q9NTG7 399 aaPredicted RBP12.25□□□□□ -0.45
MDC1-209ENST00000613547 MRTO4Q9UKD2 239 aaKnown RBP12.25□□□□□ -0.45
MDC1-209ENST00000613547 FAF1Q9UNN5 650 aaPredicted RBP12.25□□□□□ -0.45
MDC1-209ENST00000613547 KLF13Q9Y2Y9 288 aaPredicted RBP12.25□□□□□ -0.45
MDC1-209ENST00000613547 PCDHGB6Q9Y5F9 930 aa12.25□□□□□ -0.45
MDC1-209ENST00000613547 CSAG2Q9Y5P2 127 aa12.25□□□□□ -0.45
MDC1-209ENST00000613547 NPFFR2Q9Y5X5 522 aa12.25□□□□□ -0.45
MDC1-209ENST00000613547 CCDC154A6NI56 674 aa12.24□□□□□ -0.45
MDC1-209ENST00000613547 TTLL8A6PVC2 850 aa12.24□□□□□ -0.45
MDC1-209ENST00000613547 TO15178 435 aa12.24□□□□□ -0.45
MDC1-209ENST00000613547 SCN2BO60939 215 aa12.24□□□□□ -0.45
MDC1-209ENST00000613547 NEURL1O76050 574 aa12.24□□□□□ -0.45
MDC1-209ENST00000613547 SOX30O94993 753 aa12.24□□□□□ -0.45
MDC1-209ENST00000613547 NADKO95544 446 aaPredicted RBP12.24□□□□□ -0.45
MDC1-209ENST00000613547 SP1P08047 785 aa12.24□□□□□ -0.45
MDC1-209ENST00000613547 FBXO45P0C2W1 286 aa12.24□□□□□ -0.45
MDC1-209ENST00000613547 ST13P50502 369 aaKnown RBP12.24□□□□□ -0.45
MDC1-209ENST00000613547 SEC24CP53992 1094 aa12.24□□□□□ -0.45
MDC1-209ENST00000613547 MRPS22P82650 360 aaKnown RBP12.24□□□□□ -0.45
MDC1-209ENST00000613547 SF3A3Q12874 501 aaKnown RBP eCLIP12.24□□□□□ -0.45
MDC1-209ENST00000613547 RCAN2Q14206 197 aa12.24□□□□□ -0.45
MDC1-209ENST00000613547 PLEKHN1Q494U1 663 aaPredicted RBP12.24□□□□□ -0.45
MDC1-209ENST00000613547 AGKQ53H12 422 aa12.24□□□□□ -0.45
MDC1-209ENST00000613547 MFSD12Q6NUT3 480 aa12.24□□□□□ -0.45
MDC1-209ENST00000613547 RPUSD3Q6P087 351 aaKnown RBP12.24□□□□□ -0.45
MDC1-209ENST00000613547 SLC34A3Q8N130 599 aa12.24□□□□□ -0.45
MDC1-209ENST00000613547 SLC9A6Q92581 669 aa12.24□□□□□ -0.45
MDC1-209ENST00000613547 JADE3Q92613 823 aa12.24□□□□□ -0.45
MDC1-209ENST00000613547 ITCHQ96J02 903 aa12.24□□□□□ -0.45
MDC1-209ENST00000613547 SIGLEC12Q96PQ1 595 aa12.24□□□□□ -0.45
MDC1-209ENST00000613547 LMF2Q9BU23 707 aaKnown RBP12.24□□□□□ -0.45
MDC1-209ENST00000613547 FAM107BQ9H098 131 aa12.24□□□□□ -0.45
MDC1-209ENST00000613547 KLHL1Q9NR64 748 aa12.24□□□□□ -0.45
MDC1-209ENST00000613547 CCDC167Q9P0B6 97 aa12.24□□□□□ -0.45
MDC1-209ENST00000613547 RALYQ9UKM9 306 aaKnown RBP12.24□□□□□ -0.45
MDC1-209ENST00000613547 VPS4AQ9UN37 437 aa12.24□□□□□ -0.45
MDC1-209ENST00000613547 RNF103-CHMP3A0A140T963 221 aa12.23□□□□□ -0.45
MDC1-209ENST00000613547 B8ZZF3 427 aa12.23□□□□□ -0.45
MDC1-209ENST00000613547 NR5A2O00482 541 aa12.23□□□□□ -0.45
MDC1-209ENST00000613547 RFXANKO14593 260 aa12.23□□□□□ -0.45
MDC1-209ENST00000613547 NME2P1O60361 137 aa12.23□□□□□ -0.45
MDC1-209ENST00000613547 PPM1BO75688 479 aa12.23□□□□□ -0.45
MDC1-209ENST00000613547 SORBS2O94875 1100 aaKnown RBP12.23□□□□□ -0.45
MDC1-209ENST00000613547 KCNH1O95259 989 aa12.23□□□□□ -0.45
MDC1-209ENST00000613547 ANP32DO95626 131 aa12.23□□□□□ -0.45
MDC1-209ENST00000613547 PRB1P04280 392 aa12.23□□□□□ -0.45
MDC1-209ENST00000613547 P04436 131 aa12.23□□□□□ -0.45
MDC1-209ENST00000613547 HMGN2P05204 90 aaKnown RBP12.23□□□□□ -0.45
MDC1-209ENST00000613547 ALOX5P09917 674 aa12.23□□□□□ -0.45
MDC1-209ENST00000613547 CT45A8P0DMV1 189 aa12.23□□□□□ -0.45
MDC1-209ENST00000613547 CT45A9P0DMV2 189 aa12.23□□□□□ -0.45
MDC1-209ENST00000613547 NME2P22392 152 aa12.23□□□□□ -0.45
MDC1-209ENST00000613547 UQCRC2P22695 453 aa12.23□□□□□ -0.45
MDC1-209ENST00000613547 ABCD3P28288 659 aa12.23□□□□□ -0.45
MDC1-209ENST00000613547 IL12BP29460 328 aa12.23□□□□□ -0.45
MDC1-209ENST00000613547 CHI3L1P36222 383 aaPredicted RBP12.23□□□□□ -0.45
MDC1-209ENST00000613547 ANXA11P50995 505 aaKnown RBP12.23□□□□□ -0.45
MDC1-209ENST00000613547 PSMD4P55036 377 aaKnown RBP12.23□□□□□ -0.45
MDC1-209ENST00000613547 CORO7P57737 925 aa12.23□□□□□ -0.45
MDC1-209ENST00000613547 PHC1P78364 1004 aa12.23□□□□□ -0.45
MDC1-209ENST00000613547 DECR1Q16698 335 aa12.23□□□□□ -0.45
MDC1-209ENST00000613547 ZNF791Q3KP31 576 aaPredicted RBP12.23□□□□□ -0.45
MDC1-209ENST00000613547 CYP27C1Q4G0S4 372 aa12.23□□□□□ -0.45
MDC1-209ENST00000613547 CT45A2Q5DJT8 189 aa12.23□□□□□ -0.45
MDC1-209ENST00000613547 C6orf10Q5SRN2 563 aa12.23□□□□□ -0.45
MDC1-209ENST00000613547 BLOC1S3Q6QNY0 202 aa12.23□□□□□ -0.45
MDC1-209ENST00000613547 PRR22Q8IZ63 422 aa12.23□□□□□ -0.45
MDC1-209ENST00000613547 ZNF843Q8N446 348 aa12.23□□□□□ -0.45
MDC1-209ENST00000613547 CPSF7Q8N684 471 aaKnown RBP12.23□□□□□ -0.45
MDC1-209ENST00000613547 PSD4Q8NDX1 1056 aa12.23□□□□□ -0.45
MDC1-209ENST00000613547 OR5AK3PQ8NH89 298 aa12.23□□□□□ -0.45
MDC1-209ENST00000613547 GPR151Q8TDV0 419 aa12.23□□□□□ -0.45
MDC1-209ENST00000613547 ADAMTS15Q8TE58 950 aa12.23□□□□□ -0.45
MDC1-209ENST00000613547 SCMH1Q96GD3 660 aa12.23□□□□□ -0.45
MDC1-209ENST00000613547 ELAC2Q9BQ52 826 aaKnown RBP12.23□□□□□ -0.45
MDC1-209ENST00000613547 ACTRT3Q9BYD9 372 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms