RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 SLC38A1Q9H2H9 487 aa13.23□□□□□ -0.29
PCDHGA3-202ENST00000612467 SDK1Q7Z5N4 2213 aa13.22□□□□□ -0.29
PCDHGA3-202ENST00000612467 EFCAB10A6NFE3 127 aa13.22□□□□□ -0.29
PCDHGA3-202ENST00000612467 PROM1O43490 865 aa13.22□□□□□ -0.29
PCDHGA3-202ENST00000612467 CYP7B1O75881 506 aa13.22□□□□□ -0.29
PCDHGA3-202ENST00000612467 RASGRP1O95267 797 aa13.22□□□□□ -0.29
PCDHGA3-202ENST00000612467 LGI1O95970 557 aa13.22□□□□□ -0.29
PCDHGA3-202ENST00000612467 LIMK1P53667 647 aa13.22□□□□□ -0.29
PCDHGA3-202ENST00000612467 ZNF311Q5JNZ3 666 aa13.22□□□□□ -0.29
PCDHGA3-202ENST00000612467 OR2G6Q5TZ20 316 aa13.22□□□□□ -0.29
PCDHGA3-202ENST00000612467 LIPKQ5VXJ0 399 aa13.22□□□□□ -0.29
PCDHGA3-202ENST00000612467 NKAIN4Q8IVV8 208 aa13.22□□□□□ -0.29
PCDHGA3-202ENST00000612467 PARP16Q8N5Y8 322 aa13.22□□□□□ -0.29
PCDHGA3-202ENST00000612467 KIAA1958Q8N8K9 716 aa13.22□□□□□ -0.29
PCDHGA3-202ENST00000612467 OR7G2Q8NG99 324 aa13.22□□□□□ -0.29
PCDHGA3-202ENST00000612467 SLC9A6Q92581 669 aa13.22□□□□□ -0.29
PCDHGA3-202ENST00000612467 ELP4Q96EB1 424 aa13.22□□□□□ -0.29
PCDHGA3-202ENST00000612467 LRR1Q96L50 414 aa13.22□□□□□ -0.29
PCDHGA3-202ENST00000612467 ZNF229Q9UJW7 825 aa13.22□□□□□ -0.29
PCDHGA3-202ENST00000612467 FANCMQ8IYD8 2048 aa13.22□□□□□ -0.29
PCDHGA3-202ENST00000612467 LOC105369274A0A096LPK9 316 aa13.22□□□□□ -0.29
PCDHGA3-202ENST00000612467 NPIPA5A0A0B4J1W7 369 aa13.22□□□□□ -0.29
PCDHGA3-202ENST00000612467 LOC102723532A0A0G2JNH3 316 aa13.22□□□□□ -0.29
PCDHGA3-202ENST00000612467 AGAP5A6NIR3 686 aa13.22□□□□□ -0.29
PCDHGA3-202ENST00000612467 NPIPA7E9PJI5 369 aa13.22□□□□□ -0.29
PCDHGA3-202ENST00000612467 PIP5K1CO60331 668 aa13.22□□□□□ -0.29
PCDHGA3-202ENST00000612467 EIF2S1P05198 315 aaKnown RBP13.22□□□□□ -0.29
PCDHGA3-202ENST00000612467 NPIPA8P0DM63 369 aa13.22□□□□□ -0.29
PCDHGA3-202ENST00000612467 POLR2CP19387 275 aaPredicted RBP13.22□□□□□ -0.29
PCDHGA3-202ENST00000612467 ALDH6A1Q02252 535 aaKnown RBP13.22□□□□□ -0.29
PCDHGA3-202ENST00000612467 CBX3Q13185 183 aa13.22□□□□□ -0.29
PCDHGA3-202ENST00000612467 KIAA1324Q6UXG2 1013 aaKnown RBP13.22□□□□□ -0.29
PCDHGA3-202ENST00000612467 B3GLCTQ6Y288 498 aa13.22□□□□□ -0.29
PCDHGA3-202ENST00000612467 PLEKHG7Q6ZR37 379 aa13.22□□□□□ -0.29
PCDHGA3-202ENST00000612467 ZNF367Q7RTV3 350 aa13.22□□□□□ -0.29
PCDHGA3-202ENST00000612467 KRT73Q86Y46 540 aa13.22□□□□□ -0.29
PCDHGA3-202ENST00000612467 LYSMD2Q8IV50 215 aa13.22□□□□□ -0.29
PCDHGA3-202ENST00000612467 OR4N4Q8N0Y3 316 aa13.22□□□□□ -0.29
PCDHGA3-202ENST00000612467 ZFP41Q8N8Y5 198 aa13.22□□□□□ -0.29
PCDHGA3-202ENST00000612467 FLCNQ8NFG4 579 aa13.22□□□□□ -0.29
PCDHGA3-202ENST00000612467 ZNF681Q96N22 645 aa13.22□□□□□ -0.29
PCDHGA3-202ENST00000612467 OR2M4Q96R27 311 aa13.22□□□□□ -0.29
PCDHGA3-202ENST00000612467 C14orf119Q9NWQ9 140 aa13.22□□□□□ -0.29
PCDHGA3-202ENST00000612467 ARRDC5A6NEK1 342 aa13.21□□□□□ -0.29
PCDHGA3-202ENST00000612467 ALOX12P18054 663 aa13.21□□□□□ -0.29
PCDHGA3-202ENST00000612467 FUT1P19526 365 aa13.21□□□□□ -0.29
PCDHGA3-202ENST00000612467 CSNK2A2P19784 350 aaPredicted RBP13.21□□□□□ -0.29
PCDHGA3-202ENST00000612467 NTSR1P30989 418 aa13.21□□□□□ -0.29
PCDHGA3-202ENST00000612467 ETV5P41161 510 aa13.21□□□□□ -0.29
PCDHGA3-202ENST00000612467 ETV1P50549 477 aa13.21□□□□□ -0.29
PCDHGA3-202ENST00000612467 PPP5CP53041 499 aa13.21□□□□□ -0.29
PCDHGA3-202ENST00000612467 PRRT3Q5FWE3 981 aa13.21□□□□□ -0.29
PCDHGA3-202ENST00000612467 ZNF425Q6IV72 752 aa13.21□□□□□ -0.29
PCDHGA3-202ENST00000612467 CDS1Q92903 461 aa13.21□□□□□ -0.29
PCDHGA3-202ENST00000612467 SLC35A4Q96G79 324 aa13.21□□□□□ -0.29
PCDHGA3-202ENST00000612467 STARD5Q9NSY2 213 aa13.21□□□□□ -0.29
PCDHGA3-202ENST00000612467 LSM2Q9Y333 95 aaKnown RBP13.21□□□□□ -0.29
PCDHGA3-202ENST00000612467 CCRL2O00421 344 aa13.21□□□□□ -0.29
PCDHGA3-202ENST00000612467 THY1P04216 161 aa13.21□□□□□ -0.29
PCDHGA3-202ENST00000612467 CMPK1P30085 196 aa13.21□□□□□ -0.29
PCDHGA3-202ENST00000612467 SERPINB1P30740 379 aa13.21□□□□□ -0.29
PCDHGA3-202ENST00000612467 UGT2B10P36537 528 aa13.21□□□□□ -0.29
PCDHGA3-202ENST00000612467 RPS19P39019 145 aaKnown RBP13.21□□□□□ -0.29
PCDHGA3-202ENST00000612467 GPR4P46093 362 aa13.21□□□□□ -0.29
PCDHGA3-202ENST00000612467 TAS2R41P59536 307 aa13.21□□□□□ -0.29
PCDHGA3-202ENST00000612467 PPP1CAP62136 330 aa13.21□□□□□ -0.29
PCDHGA3-202ENST00000612467 MLC1Q15049 377 aa13.21□□□□□ -0.29
PCDHGA3-202ENST00000612467 TMEM35AQ53FP2 167 aa13.21□□□□□ -0.29
PCDHGA3-202ENST00000612467 SYT14P1Q58G82 188 aa13.21□□□□□ -0.29
PCDHGA3-202ENST00000612467 FBXO42Q6P3S6 717 aa13.21□□□□□ -0.29
PCDHGA3-202ENST00000612467 KLHL6Q8WZ60 621 aa13.21□□□□□ -0.29
PCDHGA3-202ENST00000612467 BMFQ96LC9 184 aa13.21□□□□□ -0.29
PCDHGA3-202ENST00000612467 BARHL1Q9BZE3 327 aa13.21□□□□□ -0.29
PCDHGA3-202ENST00000612467 TCEAL2Q9H3H9 227 aaPredicted RBP13.21□□□□□ -0.29
PCDHGA3-202ENST00000612467 CAPN10Q9HC96 672 aa13.21□□□□□ -0.29
PCDHGA3-202ENST00000612467 FBXO34Q9NWN3 711 aa13.21□□□□□ -0.29
PCDHGA3-202ENST00000612467 ERVK13-1Q9NX77 482 aa13.21□□□□□ -0.29
PCDHGA3-202ENST00000612467 SLC9A8Q9Y2E8 581 aa13.21□□□□□ -0.29
PCDHGA3-202ENST00000612467 WBP11Q9Y2W2 641 aaKnown RBP13.21□□□□□ -0.29
PCDHGA3-202ENST00000612467 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.2□□□□□ -0.3
PCDHGA3-202ENST00000612467 A0A1W2PRQ8 180 aa13.2□□□□□ -0.3
PCDHGA3-202ENST00000612467 GSAPA4D1B5 854 aa13.2□□□□□ -0.3
PCDHGA3-202ENST00000612467 SH3D21A4FU49 640 aa13.2□□□□□ -0.3
PCDHGA3-202ENST00000612467 SYNDIG1LA6NDD5 238 aa13.2□□□□□ -0.3
PCDHGA3-202ENST00000612467 LDB3O75112 727 aa13.2□□□□□ -0.3
PCDHGA3-202ENST00000612467 CTSBP07858 339 aa13.2□□□□□ -0.3
PCDHGA3-202ENST00000612467 FHP07954 510 aa13.2□□□□□ -0.3
PCDHGA3-202ENST00000612467 CELA2BP08218 269 aaPredicted RBP13.2□□□□□ -0.3
PCDHGA3-202ENST00000612467 GIPRP48546 466 aa13.2□□□□□ -0.3
PCDHGA3-202ENST00000612467 SNAPC1Q16533 368 aa13.2□□□□□ -0.3
PCDHGA3-202ENST00000612467 SPATC1Q76KD6 591 aa13.2□□□□□ -0.3
PCDHGA3-202ENST00000612467 MFSD9Q8NBP5 474 aa13.2□□□□□ -0.3
PCDHGA3-202ENST00000612467 OR5T3Q8NGG3 340 aa13.2□□□□□ -0.3
PCDHGA3-202ENST00000612467 GIMAP5Q96F15 307 aa13.2□□□□□ -0.3
PCDHGA3-202ENST00000612467 TMEM80Q96HE8 168 aa13.2□□□□□ -0.3
PCDHGA3-202ENST00000612467 GAS2L1Q99501 681 aaPredicted RBP13.2□□□□□ -0.3
PCDHGA3-202ENST00000612467 TAPBPLQ9BX59 468 aa13.2□□□□□ -0.3
PCDHGA3-202ENST00000612467 POLR2J2Q9GZM3 115 aaKnown RBP13.2□□□□□ -0.3
PCDHGA3-202ENST00000612467 MMP27Q9H306 513 aa13.2□□□□□ -0.3
PCDHGA3-202ENST00000612467 SRMSQ9H3Y6 488 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms