RNA–Protein interactions for RNA: ENST00000611963.4

TARDBP-213, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-213ENST00000611963 TMEM19Q96HH6 336 aa7.55□□□□□ -1.2
TARDBP-213ENST00000611963 RNF145Q96MT1 663 aa7.55□□□□□ -1.2
TARDBP-213ENST00000611963 PTCHD1Q96NR3 888 aa7.55□□□□□ -1.2
TARDBP-213ENST00000611963 DGAT2Q96PD7 388 aa7.55□□□□□ -1.2
TARDBP-213ENST00000611963 MS4A4EQ96PG1 132 aa7.55□□□□□ -1.2
TARDBP-213ENST00000611963 OR1F2PQ96R84 312 aa7.55□□□□□ -1.2
TARDBP-213ENST00000611963 OR7D2Q96RA2 312 aa7.55□□□□□ -1.2
TARDBP-213ENST00000611963 EFHD1Q9BUP0 239 aa7.55□□□□□ -1.2
TARDBP-213ENST00000611963 CXorf21Q9HAI6 301 aa7.55□□□□□ -1.2
TARDBP-213ENST00000611963 A4GALTQ9NPC4 353 aa7.55□□□□□ -1.2
TARDBP-213ENST00000611963 PNO1Q9NRX1 252 aaKnown RBP7.55□□□□□ -1.2
TARDBP-213ENST00000611963 OLAHQ9NV23 265 aa7.55□□□□□ -1.2
TARDBP-213ENST00000611963 SLC39A1Q9NY26 324 aa7.55□□□□□ -1.2
TARDBP-213ENST00000611963 NTMQ9P121 344 aa7.55□□□□□ -1.2
TARDBP-213ENST00000611963 PTGFRNQ9P2B2 879 aa7.55□□□□□ -1.2
TARDBP-213ENST00000611963 STOML1Q9UBI4 398 aa7.55□□□□□ -1.2
TARDBP-213ENST00000611963 C19orf53Q9UNZ5 99 aaPredicted RBP7.55□□□□□ -1.2
TARDBP-213ENST00000611963 MMACHCQ9Y4U1 282 aa7.55□□□□□ -1.2
TARDBP-213ENST00000611963 CFAP47Q6ZTR5 3102 aa7.55□□□□□ -1.2
TARDBP-213ENST00000611963 DMXL2Q8TDJ6 3036 aa7.54□□□□□ -1.2
TARDBP-213ENST00000611963 HEATR5AQ86XA9 2040 aa7.54□□□□□ -1.2
TARDBP-213ENST00000611963 A0A087WV62 115 aa7.54□□□□□ -1.2
TARDBP-213ENST00000611963 TMEM8BA6NDV4 472 aa7.54□□□□□ -1.2
TARDBP-213ENST00000611963 TMEM229AB2RXF0 380 aa7.54□□□□□ -1.2
TARDBP-213ENST00000611963 C5orf58C9J3I9 102 aa7.54□□□□□ -1.2
TARDBP-213ENST00000611963 POLR1CO15160 346 aaPredicted RBP7.54□□□□□ -1.2
TARDBP-213ENST00000611963 CSO75390 466 aaKnown RBP7.54□□□□□ -1.2
TARDBP-213ENST00000611963 CHRM4P08173 479 aa7.54□□□□□ -1.2
TARDBP-213ENST00000611963 HBQ1P09105 142 aa7.54□□□□□ -1.2
TARDBP-213ENST00000611963 TFPTP0C1Z6 253 aa7.54□□□□□ -1.2
TARDBP-213ENST00000611963 NR2F1P10589 423 aa7.54□□□□□ -1.2
TARDBP-213ENST00000611963 UMPSP11172 480 aa7.54□□□□□ -1.2
TARDBP-213ENST00000611963 ZNF28P17035 718 aa7.54□□□□□ -1.2
TARDBP-213ENST00000611963 ITIH1P19827 911 aa7.54□□□□□ -1.2
TARDBP-213ENST00000611963 S1PR1P21453 382 aa7.54□□□□□ -1.2
TARDBP-213ENST00000611963 PEX2P28328 305 aa7.54□□□□□ -1.2
TARDBP-213ENST00000611963 SSTR4P31391 388 aa7.54□□□□□ -1.2
TARDBP-213ENST00000611963 CCKBRP32239 447 aa7.54□□□□□ -1.2
TARDBP-213ENST00000611963 STT3AP46977 705 aa7.54□□□□□ -1.2
TARDBP-213ENST00000611963 PGDP52209 483 aa7.54□□□□□ -1.2
TARDBP-213ENST00000611963 HSD17B7P56937 341 aa7.54□□□□□ -1.2
TARDBP-213ENST00000611963 PCBP3P57721 371 aaKnown RBP7.54□□□□□ -1.2
TARDBP-213ENST00000611963 CHRNB3Q05901 458 aa7.54□□□□□ -1.2
TARDBP-213ENST00000611963 VEZF1Q14119 521 aa7.54□□□□□ -1.2
TARDBP-213ENST00000611963 ZNF267Q14586 743 aaPredicted RBP7.54□□□□□ -1.2
TARDBP-213ENST00000611963 TRIP10Q15642 601 aa7.54□□□□□ -1.2
TARDBP-213ENST00000611963 LRRC36Q1X8D7 754 aa7.54□□□□□ -1.2
TARDBP-213ENST00000611963 FAM98BQ52LJ0 330 aaKnown RBP7.54□□□□□ -1.2
TARDBP-213ENST00000611963 IRAK1BP1Q5VVH5 260 aa7.54□□□□□ -1.2
TARDBP-213ENST00000611963 LPCAT4Q643R3 524 aa7.54□□□□□ -1.2
TARDBP-213ENST00000611963 ZNF385CQ66K41 422 aaPredicted RBP7.54□□□□□ -1.2
TARDBP-213ENST00000611963 FAAH2Q6GMR7 532 aa7.54□□□□□ -1.2
TARDBP-213ENST00000611963 REEP3Q6NUK4 255 aa7.54□□□□□ -1.2
TARDBP-213ENST00000611963 CDC73Q6P1J9 531 aa7.54□□□□□ -1.2
TARDBP-213ENST00000611963 QSOX2Q6ZRP7 698 aa7.54□□□□□ -1.2
TARDBP-213ENST00000611963 CBLL1Q75N03 491 aa7.54□□□□□ -1.2
TARDBP-213ENST00000611963 EIF3MQ7L2H7 374 aaKnown RBP7.54□□□□□ -1.2
TARDBP-213ENST00000611963 HMGN2P46Q86SG4 172 aa7.54□□□□□ -1.2
TARDBP-213ENST00000611963 GALNT12Q8IXK2 581 aa7.54□□□□□ -1.2
TARDBP-213ENST00000611963 LGI4Q8N135 537 aa7.54□□□□□ -1.2
TARDBP-213ENST00000611963 TMEM102Q8N9M5 508 aaPredicted RBP7.54□□□□□ -1.2
TARDBP-213ENST00000611963 PAPD5Q8NDF8 572 aaKnown RBP7.54□□□□□ -1.2
TARDBP-213ENST00000611963 OR52R1Q8NGF1 315 aa7.54□□□□□ -1.2
TARDBP-213ENST00000611963 OR52E4Q8NGH9 312 aa7.54□□□□□ -1.2
TARDBP-213ENST00000611963 MIPOL1Q8TD10 442 aa7.54□□□□□ -1.2
TARDBP-213ENST00000611963 SLC38A5Q8WUX1 472 aa7.54□□□□□ -1.2
TARDBP-213ENST00000611963 ZCCHC14Q8WYQ9 949 aaKnown RBP7.54□□□□□ -1.2
TARDBP-213ENST00000611963 SLC9A6Q92581 669 aa7.54□□□□□ -1.2
TARDBP-213ENST00000611963 CDS1Q92903 461 aa7.54□□□□□ -1.2
TARDBP-213ENST00000611963 RIT1Q92963 219 aa7.54□□□□□ -1.2
TARDBP-213ENST00000611963 CTHRC1Q96CG8 243 aa7.54□□□□□ -1.2
TARDBP-213ENST00000611963 SLC35A4Q96G79 324 aa7.54□□□□□ -1.2
TARDBP-213ENST00000611963 TPD52L3Q96J77 140 aa7.54□□□□□ -1.2
TARDBP-213ENST00000611963 HSH2DQ96JZ2 352 aa7.54□□□□□ -1.2
TARDBP-213ENST00000611963 CNPPD1Q9BV87 410 aa7.54□□□□□ -1.2
TARDBP-213ENST00000611963 CHID1Q9BWS9 393 aa7.54□□□□□ -1.2
TARDBP-213ENST00000611963 ACTRT3Q9BYD9 372 aa7.54□□□□□ -1.2
TARDBP-213ENST00000611963 VN1R1Q9GZP7 353 aa7.54□□□□□ -1.2
TARDBP-213ENST00000611963 SEMA6AQ9H2E6 1030 aa7.54□□□□□ -1.2
TARDBP-213ENST00000611963 SOX17Q9H6I2 414 aaPredicted RBP7.54□□□□□ -1.2
TARDBP-213ENST00000611963 AKIRIN1Q9H9L7 192 aaPredicted RBP7.54□□□□□ -1.2
TARDBP-213ENST00000611963 MKKSQ9NPJ1 570 aaPredicted RBP7.54□□□□□ -1.2
TARDBP-213ENST00000611963 ARMC1Q9NVT9 282 aa7.54□□□□□ -1.2
TARDBP-213ENST00000611963 C6orf203Q9P0P8 240 aaPredicted RBP7.54□□□□□ -1.2
TARDBP-213ENST00000611963 P2RX2Q9UBL9 471 aa7.54□□□□□ -1.2
TARDBP-213ENST00000611963 MKL2Q9ULH7 1088 aa7.54□□□□□ -1.2
TARDBP-213ENST00000611963 ERVK-19Q9WJR5 959 aa7.54□□□□□ -1.2
TARDBP-213ENST00000611963 LOXL2Q9Y4K0 774 aa7.54□□□□□ -1.2
TARDBP-213ENST00000611963 AK5Q9Y6K8 562 aa7.54□□□□□ -1.2
TARDBP-213ENST00000611963 EXPH5Q8NEV8 1989 aa7.53□□□□□ -1.2
TARDBP-213ENST00000611963 CELSR3Q9NYQ7 3312 aa7.53□□□□□ -1.2
TARDBP-213ENST00000611963 IGKV3D-11A0A0A0MRZ8 115 aa7.53□□□□□ -1.2
TARDBP-213ENST00000611963 TEX51A0A1B0GUA7 166 aa7.53□□□□□ -1.2
TARDBP-213ENST00000611963 GXYLT2A0PJZ3 443 aa7.53□□□□□ -1.2
TARDBP-213ENST00000611963 TMEM247A6NEH6 219 aa7.53□□□□□ -1.2
TARDBP-213ENST00000611963 TRABD2BA6NFA1 517 aa7.53□□□□□ -1.2
TARDBP-213ENST00000611963 SAC3D1A6NKF1 404 aa7.53□□□□□ -1.2
TARDBP-213ENST00000611963 C17orf105B2RV13 164 aa7.53□□□□□ -1.2
TARDBP-213ENST00000611963 B4E171 279 aa7.53□□□□□ -1.2
TARDBP-213ENST00000611963 M0QX08 132 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms