RNA–Protein interactions for RNA: ENST00000608461.1

HDDC2-206, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-206ENST00000608461 CLHC1Q8NHS4 586 aa13.14□□□□□ -0.31
HDDC2-206ENST00000608461 SPPL2AQ8TCT8 520 aa13.14□□□□□ -0.31
HDDC2-206ENST00000608461 C1orf50Q9BV19 199 aa13.14□□□□□ -0.31
HDDC2-206ENST00000608461 NUF2Q9BZD4 464 aa13.14□□□□□ -0.31
HDDC2-206ENST00000608461 BHLHE41Q9C0J9 482 aaPredicted RBP13.14□□□□□ -0.31
HDDC2-206ENST00000608461 C3orf14Q9HBI5 128 aa13.14□□□□□ -0.31
HDDC2-206ENST00000608461 DEPPQ9NTK1 212 aa13.14□□□□□ -0.31
HDDC2-206ENST00000608461 PNPOQ9NVS9 261 aa13.14□□□□□ -0.31
HDDC2-206ENST00000608461 QPCTLQ9NXS2 382 aa13.14□□□□□ -0.31
HDDC2-206ENST00000608461 BOKQ9UMX3 212 aaPredicted RBP13.14□□□□□ -0.31
HDDC2-206ENST00000608461 A0A1B0GUH1 482 aa13.13□□□□□ -0.31
HDDC2-206ENST00000608461 NPIPA5E9PKD4 350 aa13.13□□□□□ -0.31
HDDC2-206ENST00000608461 GLSO94925 669 aaPredicted RBP13.13□□□□□ -0.31
HDDC2-206ENST00000608461 PTGER1P34995 402 aa13.13□□□□□ -0.31
HDDC2-206ENST00000608461 GPC1P35052 558 aa13.13□□□□□ -0.31
HDDC2-206ENST00000608461 KRT20P35900 424 aa13.13□□□□□ -0.31
HDDC2-206ENST00000608461 PNLIPRP2P54317 469 aa13.13□□□□□ -0.31
HDDC2-206ENST00000608461 PPP2R2AP63151 447 aa13.13□□□□□ -0.31
HDDC2-206ENST00000608461 PLCXD2Q0VAA5 305 aa13.13□□□□□ -0.31
HDDC2-206ENST00000608461 DPY19L1Q2PZI1 675 aa13.13□□□□□ -0.31
HDDC2-206ENST00000608461 VPS26BQ4G0F5 336 aa13.13□□□□□ -0.31
HDDC2-206ENST00000608461 ZNF385BQ569K4 471 aa13.13□□□□□ -0.31
HDDC2-206ENST00000608461 SPATA19Q7Z5L4 167 aa13.13□□□□□ -0.31
HDDC2-206ENST00000608461 SIMC1Q8NDZ2 872 aa13.13□□□□□ -0.31
HDDC2-206ENST00000608461 OR10G3Q8NGC4 313 aa13.13□□□□□ -0.31
HDDC2-206ENST00000608461 PSMA8Q8TAA3 256 aa13.13□□□□□ -0.31
HDDC2-206ENST00000608461 DIO2Q92813 273 aa13.13□□□□□ -0.31
HDDC2-206ENST00000608461 TMCO6Q96DC7 493 aa13.13□□□□□ -0.31
HDDC2-206ENST00000608461 OMA1Q96E52 524 aa13.13□□□□□ -0.31
HDDC2-206ENST00000608461 SLC35A4Q96G79 324 aa13.13□□□□□ -0.31
HDDC2-206ENST00000608461 C7orf26Q96N11 449 aa13.13□□□□□ -0.31
HDDC2-206ENST00000608461 ANGPTL4Q9BY76 406 aa13.13□□□□□ -0.31
HDDC2-206ENST00000608461 TTTY12Q9BZ98 90 aa13.13□□□□□ -0.31
HDDC2-206ENST00000608461 ZDHHC11Q9H8X9 412 aa13.13□□□□□ -0.31
HDDC2-206ENST00000608461 FOLH1BQ9HBA9 442 aa13.13□□□□□ -0.31
HDDC2-206ENST00000608461 NEUROD4Q9HD90 331 aa13.13□□□□□ -0.31
HDDC2-206ENST00000608461 PLSCR2Q9NRY7 297 aa13.13□□□□□ -0.31
HDDC2-206ENST00000608461 GIMAP2Q9UG22 337 aa13.13□□□□□ -0.31
HDDC2-206ENST00000608461 MRTO4Q9UKD2 239 aaKnown RBP13.13□□□□□ -0.31
HDDC2-206ENST00000608461 CNOT11Q9UKZ1 510 aaKnown RBP13.13□□□□□ -0.31
HDDC2-206ENST00000608461 NPIPA1Q9UND3 350 aa13.13□□□□□ -0.31
HDDC2-206ENST00000608461 SLC5A6Q9Y289 635 aa13.13□□□□□ -0.31
HDDC2-206ENST00000608461 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.13□□□□□ -0.31
HDDC2-206ENST00000608461 RELNP78509 3460 aa13.13□□□□□ -0.31
HDDC2-206ENST00000608461 POLEQ07864 2286 aa13.13□□□□□ -0.31
HDDC2-206ENST00000608461 A0A1W2PRB8 838 aa13.12□□□□□ -0.31
HDDC2-206ENST00000608461 EMC8O43402 210 aa13.12□□□□□ -0.31
HDDC2-206ENST00000608461 TGDSO95455 350 aa13.12□□□□□ -0.31
HDDC2-206ENST00000608461 CLNS1AP54105 237 aaKnown RBP13.12□□□□□ -0.31
HDDC2-206ENST00000608461 PSMD4P55036 377 aaKnown RBP13.12□□□□□ -0.31
HDDC2-206ENST00000608461 CASP6P55212 293 aa13.12□□□□□ -0.31
HDDC2-206ENST00000608461 PER3P56645 1201 aa13.12□□□□□ -0.31
HDDC2-206ENST00000608461 FBXW4P57775 412 aa13.12□□□□□ -0.31
HDDC2-206ENST00000608461 PPIAP62937 165 aaKnown RBP13.12□□□□□ -0.31
HDDC2-206ENST00000608461 KCNJ2P63252 427 aa13.12□□□□□ -0.31
HDDC2-206ENST00000608461 PRR5P85299 388 aa13.12□□□□□ -0.31
HDDC2-206ENST00000608461 PSG6Q00889 435 aa13.12□□□□□ -0.31
HDDC2-206ENST00000608461 PLGLB1Q02325 96 aa13.12□□□□□ -0.31
HDDC2-206ENST00000608461 FOXO1Q12778 655 aa13.12□□□□□ -0.31
HDDC2-206ENST00000608461 HSPB3Q12988 150 aa13.12□□□□□ -0.31
HDDC2-206ENST00000608461 EFR3AQ14156 821 aa13.12□□□□□ -0.31
HDDC2-206ENST00000608461 C4orf17Q53FE4 359 aa13.12□□□□□ -0.31
HDDC2-206ENST00000608461 RNFT1Q5M7Z0 435 aa13.12□□□□□ -0.31
HDDC2-206ENST00000608461 TMEM198Q66K66 360 aa13.12□□□□□ -0.31
HDDC2-206ENST00000608461 ANKRD26P1Q6NSI1 321 aa13.12□□□□□ -0.31
HDDC2-206ENST00000608461 SLC30A6Q6NXT4 461 aa13.12□□□□□ -0.31
HDDC2-206ENST00000608461 Q6ZPB1 254 aaPredicted RBP13.12□□□□□ -0.31
HDDC2-206ENST00000608461 ZNF551Q7Z340 670 aaPredicted RBP13.12□□□□□ -0.31
HDDC2-206ENST00000608461 PACS2Q86VP3 889 aa13.12□□□□□ -0.31
HDDC2-206ENST00000608461 WDR75Q8IWA0 830 aaKnown RBP13.12□□□□□ -0.31
HDDC2-206ENST00000608461 FAM109AQ8N4B1 249 aa13.12□□□□□ -0.31
HDDC2-206ENST00000608461 CDRT4Q8N9R6 151 aa13.12□□□□□ -0.31
HDDC2-206ENST00000608461 VPS37AQ8NEZ2 397 aa13.12□□□□□ -0.31
HDDC2-206ENST00000608461 OR7A2PQ8NGA2 310 aa13.12□□□□□ -0.31
HDDC2-206ENST00000608461 OR8J2Q8NGG1 315 aa13.12□□□□□ -0.31
HDDC2-206ENST00000608461 LRRC8CQ8TDW0 803 aa13.12□□□□□ -0.31
HDDC2-206ENST00000608461 DYDC1Q8WWB3 177 aa13.12□□□□□ -0.31
HDDC2-206ENST00000608461 OR5P2Q8WZ92 322 aa13.12□□□□□ -0.31
HDDC2-206ENST00000608461 HOXB13Q92826 284 aaPredicted RBP13.12□□□□□ -0.31
HDDC2-206ENST00000608461 RELTQ969Z4 430 aa13.12□□□□□ -0.31
HDDC2-206ENST00000608461 CIDECQ96AQ7 238 aaPredicted RBP13.12□□□□□ -0.31
HDDC2-206ENST00000608461 TESCQ96BS2 214 aa13.12□□□□□ -0.31
HDDC2-206ENST00000608461 MOAP1Q96BY2 351 aa13.12□□□□□ -0.31
HDDC2-206ENST00000608461 NTNG2Q96CW9 530 aa13.12□□□□□ -0.31
HDDC2-206ENST00000608461 DTNBP1Q96EV8 351 aa13.12□□□□□ -0.31
HDDC2-206ENST00000608461 MAELQ96JY0 434 aaKnown RBP13.12□□□□□ -0.31
HDDC2-206ENST00000608461 COL21A1Q96P44 957 aa13.12□□□□□ -0.31
HDDC2-206ENST00000608461 LMF2Q9BU23 707 aaKnown RBP13.12□□□□□ -0.31
HDDC2-206ENST00000608461 DOHHQ9BU89 302 aa13.12□□□□□ -0.31
HDDC2-206ENST00000608461 Q9N2J8 555 aa13.12□□□□□ -0.31
HDDC2-206ENST00000608461 ZFP64Q9NPA5 681 aa13.12□□□□□ -0.31
HDDC2-206ENST00000608461 B4GALT7Q9UBV7 327 aa13.12□□□□□ -0.31
HDDC2-206ENST00000608461 ZNF835Q9Y2P0 537 aa13.12□□□□□ -0.31
HDDC2-206ENST00000608461 EXPH5Q8NEV8 1989 aa13.12□□□□□ -0.31
HDDC2-206ENST00000608461 SDHDO14521 159 aa13.11□□□□□ -0.31
HDDC2-206ENST00000608461 TRIM3O75382 744 aaPredicted RBP13.11□□□□□ -0.31
HDDC2-206ENST00000608461 LAMP1P11279 417 aa13.11□□□□□ -0.31
HDDC2-206ENST00000608461 ELAVL4P26378 380 aaKnown RBP13.11□□□□□ -0.31
HDDC2-206ENST00000608461 PIGAP37287 484 aa13.11□□□□□ -0.31
HDDC2-206ENST00000608461 CASP3P42574 277 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms