RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 IL12AP29459 219 aa13.16□□□□□ -0.3
CTSA-219ENST00000607841 KRT20P35900 424 aa13.16□□□□□ -0.3
CTSA-219ENST00000607841 CCT3P49368 545 aaKnown RBP13.16□□□□□ -0.3
CTSA-219ENST00000607841 PRIM2P49643 509 aa13.16□□□□□ -0.3
CTSA-219ENST00000607841 POLR2JP52435 117 aaKnown RBP13.16□□□□□ -0.3
CTSA-219ENST00000607841 HBA1P69905 142 aa13.16□□□□□ -0.3
CTSA-219ENST00000607841 RPP38P78345 283 aaKnown RBP13.16□□□□□ -0.3
CTSA-219ENST00000607841 SQLEQ14534 574 aa13.16□□□□□ -0.3
CTSA-219ENST00000607841 MAPKAPK3Q16644 382 aa13.16□□□□□ -0.3
CTSA-219ENST00000607841 ZNF791Q3KP31 576 aaPredicted RBP13.16□□□□□ -0.3
CTSA-219ENST00000607841 PAOXQ6QHF9 649 aa13.16□□□□□ -0.3
CTSA-219ENST00000607841 CDRT4Q8N9R6 151 aa13.16□□□□□ -0.3
CTSA-219ENST00000607841 OR56A1Q8NGH5 318 aa13.16□□□□□ -0.3
CTSA-219ENST00000607841 OR4A15Q8NGL6 344 aa13.16□□□□□ -0.3
CTSA-219ENST00000607841 SFXN5Q8TD22 340 aa13.16□□□□□ -0.3
CTSA-219ENST00000607841 FAM120BQ96EK7 910 aaKnown RBP13.16□□□□□ -0.3
CTSA-219ENST00000607841 ZNF317Q96PQ6 595 aaPredicted RBP13.16□□□□□ -0.3
CTSA-219ENST00000607841 OR52E6Q96RD3 313 aa13.16□□□□□ -0.3
CTSA-219ENST00000607841 TMEM120AQ9BXJ8 343 aa13.16□□□□□ -0.3
CTSA-219ENST00000607841 RMND5AQ9H871 391 aa13.16□□□□□ -0.3
CTSA-219ENST00000607841 Q9N2J8 555 aa13.16□□□□□ -0.3
CTSA-219ENST00000607841 KLHL1Q9NR64 748 aa13.16□□□□□ -0.3
CTSA-219ENST00000607841 SIRT3Q9NTG7 399 aaPredicted RBP13.16□□□□□ -0.3
CTSA-219ENST00000607841 KLHL14Q9P2G3 628 aa13.16□□□□□ -0.3
CTSA-219ENST00000607841 BTNL2Q9UIR0 455 aa13.16□□□□□ -0.3
CTSA-219ENST00000607841 MRTO4Q9UKD2 239 aaKnown RBP13.16□□□□□ -0.3
CTSA-219ENST00000607841 OR10H1Q9Y4A9 318 aa13.16□□□□□ -0.3
CTSA-219ENST00000607841 KLRC4-KLRK1H3BQV0 150 aa13.15□□□□□ -0.3
CTSA-219ENST00000607841 NME2P1O60361 137 aa13.15□□□□□ -0.3
CTSA-219ENST00000607841 ZNF354AO60765 605 aaPredicted RBP13.15□□□□□ -0.3
CTSA-219ENST00000607841 SCN2BO60939 215 aa13.15□□□□□ -0.3
CTSA-219ENST00000607841 CPSF4O95639 269 aaKnown RBP13.15□□□□□ -0.3
CTSA-219ENST00000607841 P04436 131 aa13.15□□□□□ -0.3
CTSA-219ENST00000607841 KRT16P08779 473 aa13.15□□□□□ -0.3
CTSA-219ENST00000607841 CT45A8P0DMV1 189 aa13.15□□□□□ -0.3
CTSA-219ENST00000607841 CT45A9P0DMV2 189 aa13.15□□□□□ -0.3
CTSA-219ENST00000607841 NME2P22392 152 aa13.15□□□□□ -0.3
CTSA-219ENST00000607841 ABCD3P28288 659 aa13.15□□□□□ -0.3
CTSA-219ENST00000607841 SOAT1P35610 550 aa13.15□□□□□ -0.3
CTSA-219ENST00000607841 DGKQP52824 942 aa13.15□□□□□ -0.3
CTSA-219ENST00000607841 KCNK10P57789 538 aa13.15□□□□□ -0.3
CTSA-219ENST00000607841 PLCXD2Q0VAA5 305 aa13.15□□□□□ -0.3
CTSA-219ENST00000607841 NNATQ16517 81 aa13.15□□□□□ -0.3
CTSA-219ENST00000607841 NTRK2Q16620 822 aa13.15□□□□□ -0.3
CTSA-219ENST00000607841 CYP27C1Q4G0S4 372 aa13.15□□□□□ -0.3
CTSA-219ENST00000607841 CT45A2Q5DJT8 189 aa13.15□□□□□ -0.3
CTSA-219ENST00000607841 SLC22A10Q63ZE4 541 aa13.15□□□□□ -0.3
CTSA-219ENST00000607841 LYPD8Q6UX82 237 aa13.15□□□□□ -0.3
CTSA-219ENST00000607841 MSANTD1Q6ZTZ1 278 aa13.15□□□□□ -0.3
CTSA-219ENST00000607841 PRICKLE2Q7Z3G6 844 aa13.15□□□□□ -0.3
CTSA-219ENST00000607841 GALNTL5Q7Z4T8 443 aa13.15□□□□□ -0.3
CTSA-219ENST00000607841 ANKRD46Q86W74 232 aa13.15□□□□□ -0.3
CTSA-219ENST00000607841 ZNF227Q86WZ6 799 aa13.15□□□□□ -0.3
CTSA-219ENST00000607841 SLC44A2Q8IWA5 706 aaPredicted RBP13.15□□□□□ -0.3
CTSA-219ENST00000607841 CLECL1Q8IZS7 167 aa13.15□□□□□ -0.3
CTSA-219ENST00000607841 SLC34A3Q8N130 599 aa13.15□□□□□ -0.3
CTSA-219ENST00000607841 TRIML2Q8N7C3 387 aa13.15□□□□□ -0.3
CTSA-219ENST00000607841 PSD4Q8NDX1 1056 aa13.15□□□□□ -0.3
CTSA-219ENST00000607841 CCDC115Q96NT0 180 aa13.15□□□□□ -0.3
CTSA-219ENST00000607841 PANX1Q96RD7 426 aa13.15□□□□□ -0.3
CTSA-219ENST00000607841 SECISBP2Q96T21 854 aaKnown RBP13.15□□□□□ -0.3
CTSA-219ENST00000607841 LMF2Q9BU23 707 aaKnown RBP13.15□□□□□ -0.3
CTSA-219ENST00000607841 CXorf36Q9H7Y0 433 aa13.15□□□□□ -0.3
CTSA-219ENST00000607841 EQTNQ9NQ60 294 aa13.15□□□□□ -0.3
CTSA-219ENST00000607841 AGPAT4Q9NRZ5 378 aa13.15□□□□□ -0.3
CTSA-219ENST00000607841 CNIH4Q9P003 139 aa13.15□□□□□ -0.3
CTSA-219ENST00000607841 FAF1Q9UNN5 650 aaPredicted RBP13.15□□□□□ -0.3
CTSA-219ENST00000607841 COPG1Q9Y678 874 aaKnown RBP13.15□□□□□ -0.3
CTSA-219ENST00000607841 PIEZO2Q9H5I5 2752 aa13.15□□□□□ -0.3
CTSA-219ENST00000607841 C9JVG2 144 aa13.14□□□□□ -0.31
CTSA-219ENST00000607841 SLC28A2O43868 658 aa13.14□□□□□ -0.31
CTSA-219ENST00000607841 ABCB7O75027 752 aa13.14□□□□□ -0.31
CTSA-219ENST00000607841 PPM1BO75688 479 aa13.14□□□□□ -0.31
CTSA-219ENST00000607841 CRYABP02511 175 aaKnown RBP13.14□□□□□ -0.31
CTSA-219ENST00000607841 UQCRC2P22695 453 aa13.14□□□□□ -0.31
CTSA-219ENST00000607841 PSMD4P55036 377 aaKnown RBP13.14□□□□□ -0.31
CTSA-219ENST00000607841 CORO7P57737 925 aa13.14□□□□□ -0.31
CTSA-219ENST00000607841 PHC1P78364 1004 aa13.14□□□□□ -0.31
CTSA-219ENST00000607841 MRPS22P82650 360 aaKnown RBP13.14□□□□□ -0.31
CTSA-219ENST00000607841 PSG6Q00889 435 aa13.14□□□□□ -0.31
CTSA-219ENST00000607841 TP53BP2Q13625 1128 aa13.14□□□□□ -0.31
CTSA-219ENST00000607841 INPP5JQ15735 1006 aaPredicted RBP13.14□□□□□ -0.31
CTSA-219ENST00000607841 COLEC12Q5KU26 742 aa13.14□□□□□ -0.31
CTSA-219ENST00000607841 MFSD12Q6NUT3 480 aa13.14□□□□□ -0.31
CTSA-219ENST00000607841 FAM180AQ6UWF9 173 aa13.14□□□□□ -0.31
CTSA-219ENST00000607841 NUP54Q7Z3B4 507 aa13.14□□□□□ -0.31
CTSA-219ENST00000607841 MDGA2Q7Z553 956 aa13.14□□□□□ -0.31
CTSA-219ENST00000607841 ZNF605Q86T29 641 aa13.14□□□□□ -0.31
CTSA-219ENST00000607841 CISD2Q8N5K1 135 aaKnown RBP13.14□□□□□ -0.31
CTSA-219ENST00000607841 FAM13CQ8NE31 585 aa13.14□□□□□ -0.31
CTSA-219ENST00000607841 PAQR8Q8TEZ7 354 aa13.14□□□□□ -0.31
CTSA-219ENST00000607841 OMA1Q96E52 524 aa13.14□□□□□ -0.31
CTSA-219ENST00000607841 NSRP1Q9H0G5 558 aaKnown RBP13.14□□□□□ -0.31
CTSA-219ENST00000607841 EPN3Q9H201 632 aa13.14□□□□□ -0.31
CTSA-219ENST00000607841 SACM1LQ9NTJ5 587 aa13.14□□□□□ -0.31
CTSA-219ENST00000607841 CCDC167Q9P0B6 97 aa13.14□□□□□ -0.31
CTSA-219ENST00000607841 MAP10Q9P2G4 905 aa13.14□□□□□ -0.31
CTSA-219ENST00000607841 BSNQ9UPA5 3926 aa13.14□□□□□ -0.31
CTSA-219ENST00000607841 DOCK10Q96BY6 2186 aa13.13□□□□□ -0.31
CTSA-219ENST00000607841 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms