RNA–Protein interactions for RNA: ENST00000607049.5

PKNOX1-210, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-210ENST00000607049 CASP3P42574 277 aa13.21□□□□□ -0.29
PKNOX1-210ENST00000607049 EMDP50402 254 aa13.21□□□□□ -0.29
PKNOX1-210ENST00000607049 CEBPEQ15744 281 aa13.21□□□□□ -0.29
PKNOX1-210ENST00000607049 FAM71E1Q6IPT2 247 aa13.21□□□□□ -0.29
PKNOX1-210ENST00000607049 RNF165Q6ZSG1 346 aa13.21□□□□□ -0.29
PKNOX1-210ENST00000607049 CROCCP2Q86T23 111 aa13.21□□□□□ -0.29
PKNOX1-210ENST00000607049 PM20D2Q8IYS1 436 aa13.21□□□□□ -0.29
PKNOX1-210ENST00000607049 CLYBLQ8N0X4 340 aa13.21□□□□□ -0.29
PKNOX1-210ENST00000607049 ZFP28Q8NHY6 868 aa13.21□□□□□ -0.29
PKNOX1-210ENST00000607049 TCP10LQ8TDR4 215 aa13.21□□□□□ -0.29
PKNOX1-210ENST00000607049 TMEM41AQ96HV5 264 aa13.21□□□□□ -0.29
PKNOX1-210ENST00000607049 COL21A1Q96P44 957 aa13.21□□□□□ -0.29
PKNOX1-210ENST00000607049 BTBD9Q96Q07 612 aa13.21□□□□□ -0.29
PKNOX1-210ENST00000607049 KCNJ16Q9NPI9 418 aa13.21□□□□□ -0.29
PKNOX1-210ENST00000607049 DDX18Q9NVP1 670 aaKnown RBP13.21□□□□□ -0.29
PKNOX1-210ENST00000607049 DTX4Q9Y2E6 619 aa13.21□□□□□ -0.29
PKNOX1-210ENST00000607049 GPR55Q9Y2T6 319 aaPredicted RBP13.21□□□□□ -0.29
PKNOX1-210ENST00000607049 LIPGQ9Y5X9 500 aa13.21□□□□□ -0.29
PKNOX1-210ENST00000607049 A0A087WV62 115 aa13.2□□□□□ -0.3
PKNOX1-210ENST00000607049 OR6C70A6NIJ9 312 aa13.2□□□□□ -0.3
PKNOX1-210ENST00000607049 LRRC3CA6NJW4 275 aa13.2□□□□□ -0.3
PKNOX1-210ENST00000607049 MYO1GB0I1T2 1018 aa13.2□□□□□ -0.3
PKNOX1-210ENST00000607049 TMEM114B3SHH9 223 aa13.2□□□□□ -0.3
PKNOX1-210ENST00000607049 RGS16O15492 202 aaPredicted RBP13.2□□□□□ -0.3
PKNOX1-210ENST00000607049 JUNP05412 331 aaKnown RBP13.2□□□□□ -0.3
PKNOX1-210ENST00000607049 FGF4P08620 206 aa13.2□□□□□ -0.3
PKNOX1-210ENST00000607049 RFPL3SP0C7P2 107 aa13.2□□□□□ -0.3
PKNOX1-210ENST00000607049 ALDH3A1P30838 453 aa13.2□□□□□ -0.3
PKNOX1-210ENST00000607049 ASMTP46597 345 aa13.2□□□□□ -0.3
PKNOX1-210ENST00000607049 ZNF155Q12901 538 aaPredicted RBP13.2□□□□□ -0.3
PKNOX1-210ENST00000607049 KRT71Q3SY84 523 aa13.2□□□□□ -0.3
PKNOX1-210ENST00000607049 TIGD3Q6B0B8 471 aa13.2□□□□□ -0.3
PKNOX1-210ENST00000607049 TMEM81Q6P7N7 255 aa13.2□□□□□ -0.3
PKNOX1-210ENST00000607049 GDF7Q7Z4P5 450 aa13.2□□□□□ -0.3
PKNOX1-210ENST00000607049 MREGQ8N565 214 aa13.2□□□□□ -0.3
PKNOX1-210ENST00000607049 CCT7Q99832 543 aa13.2□□□□□ -0.3
PKNOX1-210ENST00000607049 TMEM109Q9BVC6 243 aa13.2□□□□□ -0.3
PKNOX1-210ENST00000607049 OSBPL11Q9BXB4 747 aa13.2□□□□□ -0.3
PKNOX1-210ENST00000607049 C3orf14Q9HBI5 128 aa13.2□□□□□ -0.3
PKNOX1-210ENST00000607049 PROK2Q9HC23 129 aa13.2□□□□□ -0.3
PKNOX1-210ENST00000607049 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.2□□□□□ -0.3
PKNOX1-210ENST00000607049 C15orf41Q9Y2V0 281 aa13.2□□□□□ -0.3
PKNOX1-210ENST00000607049 TRAF6Q9Y4K3 522 aa13.2□□□□□ -0.3
PKNOX1-210ENST00000607049 V9GYY5 206 aaPredicted RBP13.2□□□□□ -0.3
PKNOX1-210ENST00000607049 GTF3C1Q12789 2109 aa13.19□□□□□ -0.3
PKNOX1-210ENST00000607049 PRAMEF25A6NGN4 478 aa13.19□□□□□ -0.3
PKNOX1-210ENST00000607049 TTC36A6NLP5 189 aa13.19□□□□□ -0.3
PKNOX1-210ENST00000607049 NPIPB8E9PQR5 432 aa13.19□□□□□ -0.3
PKNOX1-210ENST00000607049 CTIFO43310 598 aaKnown RBP13.19□□□□□ -0.3
PKNOX1-210ENST00000607049 LINC00032P0C843 101 aa13.19□□□□□ -0.3
PKNOX1-210ENST00000607049 MYZAPP0CAP1 466 aa13.19□□□□□ -0.3
PKNOX1-210ENST00000607049 GRNP28799 593 aaKnown RBP13.19□□□□□ -0.3
PKNOX1-210ENST00000607049 GPC1P35052 558 aa13.19□□□□□ -0.3
PKNOX1-210ENST00000607049 RPL3P39023 403 aaKnown RBP13.19□□□□□ -0.3
PKNOX1-210ENST00000607049 TRPC1P48995 793 aa13.19□□□□□ -0.3
PKNOX1-210ENST00000607049 CLK3P49761 638 aaKnown RBP13.19□□□□□ -0.3
PKNOX1-210ENST00000607049 CDK9P50750 372 aaKnown RBP13.19□□□□□ -0.3
PKNOX1-210ENST00000607049 PSMD4P55036 377 aaKnown RBP13.19□□□□□ -0.3
PKNOX1-210ENST00000607049 DUSP2Q05923 314 aa13.19□□□□□ -0.3
PKNOX1-210ENST00000607049 ARL13AQ5H913 290 aaPredicted RBP13.19□□□□□ -0.3
PKNOX1-210ENST00000607049 SH2D4BQ5SQS7 431 aa13.19□□□□□ -0.3
PKNOX1-210ENST00000607049 C1orf185Q5T7R7 199 aa13.19□□□□□ -0.3
PKNOX1-210ENST00000607049 FAM219BQ5XKK7 198 aa13.19□□□□□ -0.3
PKNOX1-210ENST00000607049 KANK2Q63ZY3 851 aa13.19□□□□□ -0.3
PKNOX1-210ENST00000607049 ANGPTL8Q6UXH0 198 aa13.19□□□□□ -0.3
PKNOX1-210ENST00000607049 NCCRP1Q6ZVX7 275 aaPredicted RBP13.19□□□□□ -0.3
PKNOX1-210ENST00000607049 LARP4Q71RC2 724 aaKnown RBP eCLIP13.19□□□□□ -0.3
PKNOX1-210ENST00000607049 R3HCC1LQ7Z5L2 792 aaKnown RBP13.19□□□□□ -0.3
PKNOX1-210ENST00000607049 SLC44A2Q8IWA5 706 aaPredicted RBP13.19□□□□□ -0.3
PKNOX1-210ENST00000607049 MCEMP1Q8IX19 187 aa13.19□□□□□ -0.3
PKNOX1-210ENST00000607049 LILRB4Q8NHJ6 448 aa13.19□□□□□ -0.3
PKNOX1-210ENST00000607049 TMBIM1Q969X1 311 aa13.19□□□□□ -0.3
PKNOX1-210ENST00000607049 PPCDCQ96CD2 204 aa13.19□□□□□ -0.3
PKNOX1-210ENST00000607049 ZBED6CLQ96FA7 236 aaPredicted RBP13.19□□□□□ -0.3
PKNOX1-210ENST00000607049 PPP3R2Q96LZ3 170 aa13.19□□□□□ -0.3
PKNOX1-210ENST00000607049 GNRHR2Q96P88 292 aa13.19□□□□□ -0.3
PKNOX1-210ENST00000607049 ADOQ96SZ5 270 aa13.19□□□□□ -0.3
PKNOX1-210ENST00000607049 TTYH2Q9BSA4 534 aa13.19□□□□□ -0.3
PKNOX1-210ENST00000607049 PARD6BQ9BYG5 372 aa13.19□□□□□ -0.3
PKNOX1-210ENST00000607049 SLC6A15Q9H2J7 730 aa13.19□□□□□ -0.3
PKNOX1-210ENST00000607049 FOLH1BQ9HBA9 442 aa13.19□□□□□ -0.3
PKNOX1-210ENST00000607049 SLC24A3Q9HC58 644 aa13.19□□□□□ -0.3
PKNOX1-210ENST00000607049 Q9N2J8 555 aa13.19□□□□□ -0.3
PKNOX1-210ENST00000607049 RNF6Q9Y252 685 aa13.19□□□□□ -0.3
PKNOX1-210ENST00000607049 AHRRA9YTQ3 701 aa13.18□□□□□ -0.3
PKNOX1-210ENST00000607049 ESPNB1AK53 854 aa13.18□□□□□ -0.3
PKNOX1-210ENST00000607049 PLOD2O00469 737 aa13.18□□□□□ -0.3
PKNOX1-210ENST00000607049 GNB5O14775 395 aa13.18□□□□□ -0.3
PKNOX1-210ENST00000607049 PDPK1O15530 556 aa13.18□□□□□ -0.3
PKNOX1-210ENST00000607049 ICOSLGO75144 302 aa13.18□□□□□ -0.3
PKNOX1-210ENST00000607049 UGT2B11O75310 529 aa13.18□□□□□ -0.3
PKNOX1-210ENST00000607049 CBR3O75828 277 aa13.18□□□□□ -0.3
PKNOX1-210ENST00000607049 HPNP05981 417 aa13.18□□□□□ -0.3
PKNOX1-210ENST00000607049 SNRPB2P08579 225 aaKnown RBP13.18□□□□□ -0.3
PKNOX1-210ENST00000607049 PNLIPRP2P54317 469 aa13.18□□□□□ -0.3
PKNOX1-210ENST00000607049 NUP107P57740 925 aa13.18□□□□□ -0.3
PKNOX1-210ENST00000607049 RPL38P63173 70 aaKnown RBP13.18□□□□□ -0.3
PKNOX1-210ENST00000607049 DUSP8Q13202 625 aa13.18□□□□□ -0.3
PKNOX1-210ENST00000607049 DECR1Q16698 335 aa13.18□□□□□ -0.3
PKNOX1-210ENST00000607049 GALNTL6Q49A17 601 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms