RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.12□□□□□ -1.27
MSH6-211ENST00000606499 ACACAQ13085 2346 aa7.12□□□□□ -1.27
MSH6-211ENST00000606499 CLIC1O00299 241 aa7.11□□□□□ -1.27
MSH6-211ENST00000606499 WWP2O00308 870 aa7.11□□□□□ -1.27
MSH6-211ENST00000606499 ZNF354AO60765 605 aaPredicted RBP7.11□□□□□ -1.27
MSH6-211ENST00000606499 BCAS2O75934 225 aaPredicted RBP7.11□□□□□ -1.27
MSH6-211ENST00000606499 OR2J2O76002 312 aa7.11□□□□□ -1.27
MSH6-211ENST00000606499 ZFAND5O76080 213 aa7.11□□□□□ -1.27
MSH6-211ENST00000606499 UNC5CO95185 931 aa7.11□□□□□ -1.27
MSH6-211ENST00000606499 CT45A8P0DMV1 189 aa7.11□□□□□ -1.27
MSH6-211ENST00000606499 CT45A9P0DMV2 189 aa7.11□□□□□ -1.27
MSH6-211ENST00000606499 ICAM2P13598 275 aa7.11□□□□□ -1.27
MSH6-211ENST00000606499 ETFAP13804 333 aa7.11□□□□□ -1.27
MSH6-211ENST00000606499 MAP3K8P41279 467 aa7.11□□□□□ -1.27
MSH6-211ENST00000606499 MAN2A2P49641 1150 aa7.11□□□□□ -1.27
MSH6-211ENST00000606499 KHKP50053 298 aa7.11□□□□□ -1.27
MSH6-211ENST00000606499 CCL11P51671 97 aa7.11□□□□□ -1.27
MSH6-211ENST00000606499 NR0B1P51843 470 aaKnown RBP7.11□□□□□ -1.27
MSH6-211ENST00000606499 MVDP53602 400 aa7.11□□□□□ -1.27
MSH6-211ENST00000606499 MXRA7P84157 204 aa7.11□□□□□ -1.27
MSH6-211ENST00000606499 PSG6Q00889 435 aa7.11□□□□□ -1.27
MSH6-211ENST00000606499 FOXK2Q01167 660 aa7.11□□□□□ -1.27
MSH6-211ENST00000606499 DUSP5Q16690 384 aa7.11□□□□□ -1.27
MSH6-211ENST00000606499 RUNDC3AQ59EK9 446 aa7.11□□□□□ -1.27
MSH6-211ENST00000606499 CT45A2Q5DJT8 189 aa7.11□□□□□ -1.27
MSH6-211ENST00000606499 RABL3Q5HYI8 236 aa7.11□□□□□ -1.27
MSH6-211ENST00000606499 EXOSC6Q5RKV6 272 aaKnown RBP7.11□□□□□ -1.27
MSH6-211ENST00000606499 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.11□□□□□ -1.27
MSH6-211ENST00000606499 H3F3CQ6NXT2 135 aa7.11□□□□□ -1.27
MSH6-211ENST00000606499 JMJD6Q6NYC1 403 aaPredicted RBP7.11□□□□□ -1.27
MSH6-211ENST00000606499 C8orf82Q6P1X6 216 aaPredicted RBP7.11□□□□□ -1.27
MSH6-211ENST00000606499 TNFAIP8L2Q6P589 184 aaPredicted RBP7.11□□□□□ -1.27
MSH6-211ENST00000606499 BHLHB9Q6PI77 547 aa7.11□□□□□ -1.27
MSH6-211ENST00000606499 C6orf89Q6UWU4 347 aa7.11□□□□□ -1.27
MSH6-211ENST00000606499 RINLQ6ZS11 566 aa7.11□□□□□ -1.27
MSH6-211ENST00000606499 GPR155Q7Z3F1 870 aa7.11□□□□□ -1.27
MSH6-211ENST00000606499 GALNT10Q86SR1 603 aa7.11□□□□□ -1.27
MSH6-211ENST00000606499 APLFQ8IW19 511 aaPredicted RBP7.11□□□□□ -1.27
MSH6-211ENST00000606499 SLC44A2Q8IWA5 706 aaPredicted RBP7.11□□□□□ -1.27
MSH6-211ENST00000606499 PRR22Q8IZ63 422 aa7.11□□□□□ -1.27
MSH6-211ENST00000606499 HORMAD2Q8N7B1 307 aa7.11□□□□□ -1.27
MSH6-211ENST00000606499 ZNF441Q8N8Z8 693 aa7.11□□□□□ -1.27
MSH6-211ENST00000606499 CDRT4Q8N9R6 151 aa7.11□□□□□ -1.27
MSH6-211ENST00000606499 SLC16A11Q8NCK7 471 aa7.11□□□□□ -1.27
MSH6-211ENST00000606499 OR4N2Q8NGD1 307 aa7.11□□□□□ -1.27
MSH6-211ENST00000606499 OR8K3Q8NH51 312 aa7.11□□□□□ -1.27
MSH6-211ENST00000606499 DNAJB8Q8NHS0 232 aa7.11□□□□□ -1.27
MSH6-211ENST00000606499 PIK3R3Q92569 461 aa7.11□□□□□ -1.27
MSH6-211ENST00000606499 CDS1Q92903 461 aa7.11□□□□□ -1.27
MSH6-211ENST00000606499 RAB8BQ92930 207 aa7.11□□□□□ -1.27
MSH6-211ENST00000606499 ADIPOR1Q96A54 375 aa7.11□□□□□ -1.27
MSH6-211ENST00000606499 ROPN1LQ96C74 230 aa7.11□□□□□ -1.27
MSH6-211ENST00000606499 LRRC58Q96CX6 371 aa7.11□□□□□ -1.27
MSH6-211ENST00000606499 NSL1Q96IY1 281 aa7.11□□□□□ -1.27
MSH6-211ENST00000606499 ANKRD27Q96NW4 1050 aa7.11□□□□□ -1.27
MSH6-211ENST00000606499 BTBD9Q96Q07 612 aa7.11□□□□□ -1.27
MSH6-211ENST00000606499 OR7D2Q96RA2 312 aa7.11□□□□□ -1.27
MSH6-211ENST00000606499 ACTRT3Q9BYD9 372 aa7.11□□□□□ -1.27
MSH6-211ENST00000606499 OR51I1Q9H343 314 aa7.11□□□□□ -1.27
MSH6-211ENST00000606499 EFCAB1Q9HAE3 211 aa7.11□□□□□ -1.27
MSH6-211ENST00000606499 TPT1P8Q9HAU6 139 aa7.11□□□□□ -1.27
MSH6-211ENST00000606499 GID8Q9NWU2 228 aa7.11□□□□□ -1.27
MSH6-211ENST00000606499 GPR83Q9NYM4 423 aa7.11□□□□□ -1.27
MSH6-211ENST00000606499 PRODH2Q9UF12 536 aa7.11□□□□□ -1.27
MSH6-211ENST00000606499 FAF1Q9UNN5 650 aaPredicted RBP7.11□□□□□ -1.27
MSH6-211ENST00000606499 KCNE3Q9Y6H6 103 aa7.11□□□□□ -1.27
MSH6-211ENST00000606499 TNRC6AQ8NDV7 1962 aaKnown RBP7.11□□□□□ -1.27
MSH6-211ENST00000606499 CFAP46Q8IYW2 2715 aa7.11□□□□□ -1.27
MSH6-211ENST00000606499 DOCK10Q96BY6 2186 aa7.1□□□□□ -1.27
MSH6-211ENST00000606499 GXYLT2A0PJZ3 443 aa7.1□□□□□ -1.27
MSH6-211ENST00000606499 FRG2CA6NGY1 282 aa7.1□□□□□ -1.27
MSH6-211ENST00000606499 HMGN4O00479 90 aa7.1□□□□□ -1.27
MSH6-211ENST00000606499 ITGA10O75578 1167 aa7.1□□□□□ -1.27
MSH6-211ENST00000606499 NKX2-2O95096 273 aa7.1□□□□□ -1.27
MSH6-211ENST00000606499 NADKO95544 446 aaPredicted RBP7.1□□□□□ -1.27
MSH6-211ENST00000606499 KRT75O95678 551 aa7.1□□□□□ -1.27
MSH6-211ENST00000606499 F10P00742 488 aa7.1□□□□□ -1.27
MSH6-211ENST00000606499 NPPAP01160 153 aa7.1□□□□□ -1.27
MSH6-211ENST00000606499 ALOX5P09917 674 aa7.1□□□□□ -1.27
MSH6-211ENST00000606499 NUDT7P0C024 238 aa7.1□□□□□ -1.27
MSH6-211ENST00000606499 OR12D1P0DN82 309 aa7.1□□□□□ -1.27
MSH6-211ENST00000606499 MATN1P21941 496 aa7.1□□□□□ -1.27
MSH6-211ENST00000606499 CALB2P22676 271 aa7.1□□□□□ -1.27
MSH6-211ENST00000606499 SLC6A2P23975 617 aa7.1□□□□□ -1.27
MSH6-211ENST00000606499 GABRA3P34903 492 aa7.1□□□□□ -1.27
MSH6-211ENST00000606499 SOX11P35716 441 aa7.1□□□□□ -1.27
MSH6-211ENST00000606499 CPOXP36551 454 aa7.1□□□□□ -1.27
MSH6-211ENST00000606499 CRATP43155 626 aa7.1□□□□□ -1.27
MSH6-211ENST00000606499 PPICP45877 212 aa7.1□□□□□ -1.27
MSH6-211ENST00000606499 PRIM2P49643 509 aa7.1□□□□□ -1.27
MSH6-211ENST00000606499 SOX8P57073 446 aa7.1□□□□□ -1.27
MSH6-211ENST00000606499 AP2B1P63010 937 aa7.1□□□□□ -1.27
MSH6-211ENST00000606499 SLC25A3Q00325 362 aa7.1□□□□□ -1.27
MSH6-211ENST00000606499 GABPB1Q06547 395 aaPredicted RBP7.1□□□□□ -1.27
MSH6-211ENST00000606499 FUT5Q11128 374 aa7.1□□□□□ -1.27
MSH6-211ENST00000606499 ART3Q13508 389 aa7.1□□□□□ -1.27
MSH6-211ENST00000606499 RGNQ15493 299 aa7.1□□□□□ -1.27
MSH6-211ENST00000606499 ZNHIT3Q15649 155 aaPredicted RBP7.1□□□□□ -1.27
MSH6-211ENST00000606499 TBR1Q16650 682 aa7.1□□□□□ -1.27
MSH6-211ENST00000606499 ACER2Q5QJU3 275 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms