RNA–Protein interactions for RNA: ENST00000605847.5

NEDD8-MDP1-204, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-204ENST00000605847 PTMSP20962 102 aa13.84□□□□□ -0.19
NEDD8-MDP1-204ENST00000605847 ARFIP1P53367 373 aa13.84□□□□□ -0.19
NEDD8-MDP1-204ENST00000605847 TAS2R39P59534 338 aa13.84□□□□□ -0.19
NEDD8-MDP1-204ENST00000605847 PHEXP78562 749 aa13.84□□□□□ -0.19
NEDD8-MDP1-204ENST00000605847 HMGCS1Q01581 520 aa13.84□□□□□ -0.19
NEDD8-MDP1-204ENST00000605847 FAPQ12884 760 aa13.84□□□□□ -0.19
NEDD8-MDP1-204ENST00000605847 PON3Q15166 354 aa13.84□□□□□ -0.19
NEDD8-MDP1-204ENST00000605847 CYP1B1Q16678 543 aa13.84□□□□□ -0.19
NEDD8-MDP1-204ENST00000605847 OR5M10Q6IEU7 315 aa13.84□□□□□ -0.19
NEDD8-MDP1-204ENST00000605847 PPP4R4Q6NUP7 873 aa13.84□□□□□ -0.19
NEDD8-MDP1-204ENST00000605847 ADAM5Q6NVV9 412 aa13.84□□□□□ -0.19
NEDD8-MDP1-204ENST00000605847 LRRC70Q7Z2Q7 622 aa13.84□□□□□ -0.19
NEDD8-MDP1-204ENST00000605847 MYLK4Q86YV6 388 aaPredicted RBP13.84□□□□□ -0.19
NEDD8-MDP1-204ENST00000605847 TMEM139Q8IV31 216 aa13.84□□□□□ -0.19
NEDD8-MDP1-204ENST00000605847 GBP7Q8N8V2 638 aaPredicted RBP13.84□□□□□ -0.19
NEDD8-MDP1-204ENST00000605847 HUS1BQ8NHY5 278 aa13.84□□□□□ -0.19
NEDD8-MDP1-204ENST00000605847 FNDC9Q8TBE3 224 aa13.84□□□□□ -0.19
NEDD8-MDP1-204ENST00000605847 SMAP2Q8WU79 429 aaPredicted RBP13.84□□□□□ -0.19
NEDD8-MDP1-204ENST00000605847 MTERF1Q99551 399 aaKnown RBP13.84□□□□□ -0.19
NEDD8-MDP1-204ENST00000605847 NTMT1Q9BV86 223 aa13.84□□□□□ -0.19
NEDD8-MDP1-204ENST00000605847 ITPAQ9BY32 194 aa13.84□□□□□ -0.19
NEDD8-MDP1-204ENST00000605847 BRINP2Q9C0B6 783 aa13.84□□□□□ -0.19
NEDD8-MDP1-204ENST00000605847 STMN4Q9H169 189 aaPredicted RBP13.84□□□□□ -0.19
NEDD8-MDP1-204ENST00000605847 ALG2Q9H553 416 aa13.84□□□□□ -0.19
NEDD8-MDP1-204ENST00000605847 EMC9Q9Y3B6 208 aa13.84□□□□□ -0.19
NEDD8-MDP1-204ENST00000605847 ZNF175Q9Y473 711 aa13.84□□□□□ -0.19
NEDD8-MDP1-204ENST00000605847 RNF115Q9Y4L5 304 aa13.84□□□□□ -0.19
NEDD8-MDP1-204ENST00000605847 ASB4Q9Y574 426 aa13.84□□□□□ -0.19
NEDD8-MDP1-204ENST00000605847 MAGED1Q9Y5V3 778 aaPredicted RBP13.84□□□□□ -0.19
NEDD8-MDP1-204ENST00000605847 USF3Q68DE3 2245 aa13.84□□□□□ -0.19
NEDD8-MDP1-204ENST00000605847 CR1P17927 2039 aa13.83□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 A0A1W2PS29 197 aa13.83□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 DLX3O60479 287 aa13.83□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 EEDO75530 441 aaKnown RBP13.83□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 PLGP00747 810 aaPredicted RBP13.83□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 DANCRP0C864 163 aa13.83□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 FCGR2AP12318 317 aa13.83□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 EPORP19235 508 aa13.83□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 PTX3P26022 381 aaPredicted RBP13.83□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 THBS2P35442 1172 aa13.83□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 PIK3CBP42338 1070 aa13.83□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 XKP51811 444 aa13.83□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 ZNF75DP51815 510 aa13.83□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 CASP9P55211 416 aa13.83□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 RPS3AP61247 264 aaKnown RBP13.83□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 RNASEH2BQ5TBB1 312 aaKnown RBP13.83□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 RAET1LQ5VY80 246 aa13.83□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 MRM1Q6IN84 353 aaKnown RBP13.83□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 TRMT10BQ6PF06 316 aaKnown RBP13.83□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 STAC2Q6ZMT1 411 aa13.83□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 ZC3HC1Q86WB0 502 aaKnown RBP13.83□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 SPATA6LQ8N4H0 392 aa13.83□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 OR4K17Q8NGC6 315 aa13.83□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 OR4K14Q8NGD5 310 aa13.83□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 RAB3IL1Q8TBN0 382 aa13.83□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 EXT2Q93063 718 aa13.83□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 PRRG4Q9BZD6 226 aa13.83□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 CD244Q9BZW8 370 aa13.83□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 ACTR6Q9GZN1 396 aa13.83□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 POPDC3Q9HBV1 291 aa13.83□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 ANK2Q01484 3957 aa13.82□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 A0A0A6YYD5 115 aa13.82□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 UBFD1O14562 309 aaKnown RBP13.82□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 PGRMC2O15173 223 aa13.82□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 TMPRSS11DO60235 418 aa13.82□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 ZIC3O60481 467 aa13.82□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 REM1O75628 298 aa13.82□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 FESP07332 822 aa13.82□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 DSCR4P56555 118 aaPredicted RBP13.82□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 SRSF2Q01130 221 aaKnown RBP13.82□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 E2F2Q14209 437 aa13.82□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 SGCBQ16585 318 aa13.82□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 TMEM249Q2WGJ8 235 aa13.82□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 MSS51Q4VC12 460 aa13.82□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 HP1BP3Q5SSJ5 553 aaPredicted RBP13.82□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 GRHL2Q6ISB3 625 aa13.82□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 DNM1P46Q6ZS02 220 aa13.82□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 NUDT13Q86X67 352 aa13.82□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 IGDCC3Q8IVU1 814 aa13.82□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 PDPRQ8NCN5 879 aa13.82□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 OR6K3Q8NGY3 331 aa13.82□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 GRK7Q8WTQ7 553 aa13.82□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 GFM2Q969S9 779 aaKnown RBP13.82□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 COL21A1Q96P44 957 aa13.82□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 TNFRSF13CQ96RJ3 184 aa13.82□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 ESRP2Q9H6T0 727 aaKnown RBP13.82□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 PLSCR4Q9NRQ2 329 aa13.82□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 PSAT1Q9Y617 370 aa13.82□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 MED12Q93074 2177 aa13.81□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 OR6C70A6NIJ9 312 aa13.81□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 H0YC42 278 aa13.81□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 H3BML4 177 aa13.81□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 SSX4O60224 188 aa13.81□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 NDUFS7O75251 213 aa13.81□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 CD3EP07766 207 aa13.81□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 CCDC166P0CW27 439 aa13.81□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 CPMP14384 443 aa13.81□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 PORP16435 677 aaPredicted RBP13.81□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 SRD5A1P18405 259 aa13.81□□□□□ -0.2
NEDD8-MDP1-204ENST00000605847 GRK2P25098 689 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms