RNA–Protein interactions for RNA: ENST00000604967.1

TUBE1-210, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-210ENST00000604967 ARHGAP11AQ6P4F7 1023 aa9.76□□□□□ -0.85
TUBE1-210ENST00000604967 RNF165Q6ZSG1 346 aa9.76□□□□□ -0.85
TUBE1-210ENST00000604967 ZNF551Q7Z340 670 aaPredicted RBP9.76□□□□□ -0.85
TUBE1-210ENST00000604967 SLC22A16Q86VW1 577 aa9.76□□□□□ -0.85
TUBE1-210ENST00000604967 LIX1LQ8IVB5 337 aa9.76□□□□□ -0.85
TUBE1-210ENST00000604967 ZNF295-AS1Q8N0V1 137 aa9.76□□□□□ -0.85
TUBE1-210ENST00000604967 WDSUB1Q8N9V3 476 aa9.76□□□□□ -0.85
TUBE1-210ENST00000604967 C7orf57Q8NEG2 295 aa9.76□□□□□ -0.85
TUBE1-210ENST00000604967 AGR3Q8TD06 166 aa9.76□□□□□ -0.85
TUBE1-210ENST00000604967 PHF10Q8WUB8 498 aaKnown RBP9.76□□□□□ -0.85
TUBE1-210ENST00000604967 TWIST2Q8WVJ9 160 aa9.76□□□□□ -0.85
TUBE1-210ENST00000604967 DIO2Q92813 273 aa9.76□□□□□ -0.85
TUBE1-210ENST00000604967 TMBIM1Q969X1 311 aa9.76□□□□□ -0.85
TUBE1-210ENST00000604967 LCORQ96JN0 433 aaPredicted RBP9.76□□□□□ -0.85
TUBE1-210ENST00000604967 AMDHD1Q96NU7 426 aa9.76□□□□□ -0.85
TUBE1-210ENST00000604967 ZIM3Q96PE6 472 aa9.76□□□□□ -0.85
TUBE1-210ENST00000604967 SMC6Q96SB8 1091 aa9.76□□□□□ -0.85
TUBE1-210ENST00000604967 FAIM2Q9BWQ8 316 aa9.76□□□□□ -0.85
TUBE1-210ENST00000604967 FOLH1BQ9HBA9 442 aa9.76□□□□□ -0.85
TUBE1-210ENST00000604967 LRTM1Q9HBL6 345 aa9.76□□□□□ -0.85
TUBE1-210ENST00000604967 CNIH4Q9P003 139 aa9.76□□□□□ -0.85
TUBE1-210ENST00000604967 ENTPD4Q9Y227 616 aa9.76□□□□□ -0.85
TUBE1-210ENST00000604967 ZNF780BQ9Y6R6 833 aa9.76□□□□□ -0.85
TUBE1-210ENST00000604967 CACNA1CQ13936 2221 aa9.76□□□□□ -0.85
TUBE1-210ENST00000604967 FREM3P0C091 2139 aa9.76□□□□□ -0.85
TUBE1-210ENST00000604967 OTOGQ6ZRI0 2925 aa9.75□□□□□ -0.85
TUBE1-210ENST00000604967 FRG2CA6NGY1 282 aa9.75□□□□□ -0.85
TUBE1-210ENST00000604967 AQP7O14520 342 aa9.75□□□□□ -0.85
TUBE1-210ENST00000604967 AKAP10O43572 662 aa9.75□□□□□ -0.85
TUBE1-210ENST00000604967 ICOSLGO75144 302 aa9.75□□□□□ -0.85
TUBE1-210ENST00000604967 TOXO94900 526 aa9.75□□□□□ -0.85
TUBE1-210ENST00000604967 IGKV1D-16P01601 117 aa9.75□□□□□ -0.85
TUBE1-210ENST00000604967 DHRS4L1P0CG22 281 aa9.75□□□□□ -0.85
TUBE1-210ENST00000604967 GLI4P10075 376 aa9.75□□□□□ -0.85
TUBE1-210ENST00000604967 BCKDHAP12694 445 aa9.75□□□□□ -0.85
TUBE1-210ENST00000604967 PTPN6P29350 595 aa9.75□□□□□ -0.85
TUBE1-210ENST00000604967 SERPINB4P48594 390 aa9.75□□□□□ -0.85
TUBE1-210ENST00000604967 CDK9P50750 372 aaKnown RBP9.75□□□□□ -0.85
TUBE1-210ENST00000604967 KCNJ2P63252 427 aa9.75□□□□□ -0.85
TUBE1-210ENST00000604967 IFFO1Q0D2I5 559 aa9.75□□□□□ -0.85
TUBE1-210ENST00000604967 PDE7AQ13946 482 aa9.75□□□□□ -0.85
TUBE1-210ENST00000604967 SLC10A1Q14973 349 aa9.75□□□□□ -0.85
TUBE1-210ENST00000604967 KRT71Q3SY84 523 aa9.75□□□□□ -0.85
TUBE1-210ENST00000604967 EIPR1Q53HC9 387 aa9.75□□□□□ -0.85
TUBE1-210ENST00000604967 TMEM107Q6UX40 140 aa9.75□□□□□ -0.85
TUBE1-210ENST00000604967 RGS9BPQ6ZS82 235 aa9.75□□□□□ -0.85
TUBE1-210ENST00000604967 TAGAPQ8N103 731 aa9.75□□□□□ -0.85
TUBE1-210ENST00000604967 FAM76AQ8TAV0 307 aa9.75□□□□□ -0.85
TUBE1-210ENST00000604967 JSRP1Q96MG2 331 aaPredicted RBP9.75□□□□□ -0.85
TUBE1-210ENST00000604967 TSSK3Q96PN8 268 aa9.75□□□□□ -0.85
TUBE1-210ENST00000604967 SORT1Q99523 831 aa9.75□□□□□ -0.85
TUBE1-210ENST00000604967 KLHDC3Q9BQ90 382 aa9.75□□□□□ -0.85
TUBE1-210ENST00000604967 DOHHQ9BU89 302 aa9.75□□□□□ -0.85
TUBE1-210ENST00000604967 UCK2Q9BZX2 261 aa9.75□□□□□ -0.85
TUBE1-210ENST00000604967 ACKR4Q9NPB9 350 aa9.75□□□□□ -0.85
TUBE1-210ENST00000604967 NPDC1Q9NQX5 325 aaPredicted RBP9.75□□□□□ -0.85
TUBE1-210ENST00000604967 SIRT3Q9NTG7 399 aaPredicted RBP9.75□□□□□ -0.85
TUBE1-210ENST00000604967 C1orf109Q9NX04 203 aa9.75□□□□□ -0.85
TUBE1-210ENST00000604967 PSME2Q9UL46 239 aa9.75□□□□□ -0.85
TUBE1-210ENST00000604967 C19orf53Q9UNZ5 99 aaPredicted RBP9.75□□□□□ -0.85
TUBE1-210ENST00000604967 C15orf41Q9Y2V0 281 aa9.75□□□□□ -0.85
TUBE1-210ENST00000604967 SLC6A5Q9Y345 797 aa9.75□□□□□ -0.85
TUBE1-210ENST00000604967 KLF2Q9Y5W3 355 aaPredicted RBP9.75□□□□□ -0.85
TUBE1-210ENST00000604967 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.74□□□□□ -0.85
TUBE1-210ENST00000604967 TRGV5A0A0B4J1U4 118 aa9.74□□□□□ -0.85
TUBE1-210ENST00000604967 A0A0G2JNJ9 132 aa9.74□□□□□ -0.85
TUBE1-210ENST00000604967 WDR91A4D1P6 747 aa9.74□□□□□ -0.85
TUBE1-210ENST00000604967 ACOT7O00154 380 aa9.74□□□□□ -0.85
TUBE1-210ENST00000604967 PLOD2O00469 737 aa9.74□□□□□ -0.85
TUBE1-210ENST00000604967 PRRG2O14669 202 aa9.74□□□□□ -0.85
TUBE1-210ENST00000604967 GNB5O14775 395 aa9.74□□□□□ -0.85
TUBE1-210ENST00000604967 SUSD5O60279 629 aa9.74□□□□□ -0.85
TUBE1-210ENST00000604967 ERN1O75460 977 aaKnown RBP9.74□□□□□ -0.85
TUBE1-210ENST00000604967 SNRPB2P08579 225 aaKnown RBP9.74□□□□□ -0.85
TUBE1-210ENST00000604967 ESRRAP11474 423 aaPredicted RBP9.74□□□□□ -0.85
TUBE1-210ENST00000604967 MAP3K8P41279 467 aa9.74□□□□□ -0.85
TUBE1-210ENST00000604967 FRKP42685 505 aaPredicted RBP9.74□□□□□ -0.85
TUBE1-210ENST00000604967 NCBP2P52298 156 aaKnown RBP eCLIP9.74□□□□□ -0.85
TUBE1-210ENST00000604967 NAA20P61599 178 aa9.74□□□□□ -0.85
TUBE1-210ENST00000604967 RPL38P63173 70 aaKnown RBP9.74□□□□□ -0.85
TUBE1-210ENST00000604967 CRYZQ08257 329 aaKnown RBP9.74□□□□□ -0.85
TUBE1-210ENST00000604967 PMPCAQ10713 525 aa9.74□□□□□ -0.85
TUBE1-210ENST00000604967 HEPACAMQ14CZ8 416 aa9.74□□□□□ -0.85
TUBE1-210ENST00000604967 IMPG1Q17R60 797 aa9.74□□□□□ -0.85
TUBE1-210ENST00000604967 GALNTL6Q49A17 601 aa9.74□□□□□ -0.85
TUBE1-210ENST00000604967 EXOSC6Q5RKV6 272 aaKnown RBP9.74□□□□□ -0.85
TUBE1-210ENST00000604967 SH2D4BQ5SQS7 431 aa9.74□□□□□ -0.85
TUBE1-210ENST00000604967 HLA-DQA1Q5Y7H0 255 aa9.74□□□□□ -0.85
TUBE1-210ENST00000604967 TIGD3Q6B0B8 471 aa9.74□□□□□ -0.85
TUBE1-210ENST00000604967 PLXDC2Q6UX71 529 aa9.74□□□□□ -0.85
TUBE1-210ENST00000604967 RPTNQ6XPR3 784 aa9.74□□□□□ -0.85
TUBE1-210ENST00000604967 ZAR1Q86SH2 424 aa9.74□□□□□ -0.85
TUBE1-210ENST00000604967 SLC34A3Q8N130 599 aa9.74□□□□□ -0.85
TUBE1-210ENST00000604967 OR2L13Q8N349 312 aa9.74□□□□□ -0.85
TUBE1-210ENST00000604967 NEIL3Q8TAT5 605 aa9.74□□□□□ -0.85
TUBE1-210ENST00000604967 HOXB13Q92826 284 aaPredicted RBP9.74□□□□□ -0.85
TUBE1-210ENST00000604967 MARVELD3Q96A59 401 aa9.74□□□□□ -0.85
TUBE1-210ENST00000604967 EFHD2Q96C19 240 aaPredicted RBP9.74□□□□□ -0.85
TUBE1-210ENST00000604967 ELP4Q96EB1 424 aa9.74□□□□□ -0.85
TUBE1-210ENST00000604967 HSPBAP1Q96EW2 488 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms