RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 LIPGQ9Y5X9 500 aa13.24□□□□□ -0.29
TUBE1-208ENST00000604743 FRG2CA6NGY1 282 aa13.23□□□□□ -0.29
TUBE1-208ENST00000604743 TMEM114B3SHH9 223 aa13.23□□□□□ -0.29
TUBE1-208ENST00000604743 NPIPA2E9PIF3 369 aa13.23□□□□□ -0.29
TUBE1-208ENST00000604743 NPIPA3F8WFD2 350 aa13.23□□□□□ -0.29
TUBE1-208ENST00000604743 PDPK1O15530 556 aa13.23□□□□□ -0.29
TUBE1-208ENST00000604743 PLOD3O60568 738 aa13.23□□□□□ -0.29
TUBE1-208ENST00000604743 ERN1O75460 977 aaKnown RBP13.23□□□□□ -0.29
TUBE1-208ENST00000604743 REM1O75628 298 aa13.23□□□□□ -0.29
TUBE1-208ENST00000604743 PPM1BO75688 479 aa13.23□□□□□ -0.29
TUBE1-208ENST00000604743 ABCB1P08183 1280 aaPredicted RBP13.23□□□□□ -0.29
TUBE1-208ENST00000604743 RFPL3SP0C7P2 107 aa13.23□□□□□ -0.29
TUBE1-208ENST00000604743 DHRS4L1P0CG22 281 aa13.23□□□□□ -0.29
TUBE1-208ENST00000604743 BCKDHAP12694 445 aa13.23□□□□□ -0.29
TUBE1-208ENST00000604743 DRD5P21918 477 aa13.23□□□□□ -0.29
TUBE1-208ENST00000604743 COL8A1P27658 744 aa13.23□□□□□ -0.29
TUBE1-208ENST00000604743 MAPK1P28482 360 aa13.23□□□□□ -0.29
TUBE1-208ENST00000604743 GPC1P35052 558 aa13.23□□□□□ -0.29
TUBE1-208ENST00000604743 SLC1A6P48664 564 aa13.23□□□□□ -0.29
TUBE1-208ENST00000604743 MASP1P48740 699 aa13.23□□□□□ -0.29
TUBE1-208ENST00000604743 CORO7P57737 925 aa13.23□□□□□ -0.29
TUBE1-208ENST00000604743 RPP38P78345 283 aaKnown RBP13.23□□□□□ -0.29
TUBE1-208ENST00000604743 HSPB3Q12988 150 aa13.23□□□□□ -0.29
TUBE1-208ENST00000604743 SLC10A1Q14973 349 aa13.23□□□□□ -0.29
TUBE1-208ENST00000604743 ATP6AP1LQ52LC2 224 aa13.23□□□□□ -0.29
TUBE1-208ENST00000604743 ZNF385BQ569K4 471 aa13.23□□□□□ -0.29
TUBE1-208ENST00000604743 XKR7Q5GH72 579 aa13.23□□□□□ -0.29
TUBE1-208ENST00000604743 TMEM198Q66K66 360 aa13.23□□□□□ -0.29
TUBE1-208ENST00000604743 ARHGAP11AQ6P4F7 1023 aa13.23□□□□□ -0.29
TUBE1-208ENST00000604743 Q6ZPB1 254 aaPredicted RBP13.23□□□□□ -0.29
TUBE1-208ENST00000604743 NCCRP1Q6ZVX7 275 aaPredicted RBP13.23□□□□□ -0.29
TUBE1-208ENST00000604743 CD163Q86VB7 1156 aa13.23□□□□□ -0.29
TUBE1-208ENST00000604743 DOLPP1Q86YN1 238 aa13.23□□□□□ -0.29
TUBE1-208ENST00000604743 SLC34A3Q8N130 599 aa13.23□□□□□ -0.29
TUBE1-208ENST00000604743 FNDC5Q8NAU1 212 aa13.23□□□□□ -0.29
TUBE1-208ENST00000604743 FAM57AQ8TBR7 257 aa13.23□□□□□ -0.29
TUBE1-208ENST00000604743 TMBIM1Q969X1 311 aa13.23□□□□□ -0.29
TUBE1-208ENST00000604743 ERP27Q96DN0 273 aa13.23□□□□□ -0.29
TUBE1-208ENST00000604743 RILPQ96NA2 401 aa13.23□□□□□ -0.29
TUBE1-208ENST00000604743 AMDHD1Q96NU7 426 aa13.23□□□□□ -0.29
TUBE1-208ENST00000604743 C20orf27Q9GZN8 174 aa13.23□□□□□ -0.29
TUBE1-208ENST00000604743 METTL7AQ9H8H3 244 aa13.23□□□□□ -0.29
TUBE1-208ENST00000604743 ZDHHC11Q9H8X9 412 aa13.23□□□□□ -0.29
TUBE1-208ENST00000604743 ZFP64Q9NPA5 681 aa13.23□□□□□ -0.29
TUBE1-208ENST00000604743 RYDENQ9NUL5 291 aaKnown RBP13.23□□□□□ -0.29
TUBE1-208ENST00000604743 DDX18Q9NVP1 670 aaKnown RBP13.23□□□□□ -0.29
TUBE1-208ENST00000604743 TAS2R9Q9NYW1 312 aa13.23□□□□□ -0.29
TUBE1-208ENST00000604743 TNFRSF10DQ9UBN6 386 aa13.23□□□□□ -0.29
TUBE1-208ENST00000604743 GPR55Q9Y2T6 319 aaPredicted RBP13.23□□□□□ -0.29
TUBE1-208ENST00000604743 TMEM120BA0PK00 339 aa13.22□□□□□ -0.29
TUBE1-208ENST00000604743 C2orf72A6NCS6 295 aa13.22□□□□□ -0.29
TUBE1-208ENST00000604743 ACOX3O15254 700 aa13.22□□□□□ -0.29
TUBE1-208ENST00000604743 COQ9O75208 318 aa13.22□□□□□ -0.29
TUBE1-208ENST00000604743 EFNA1P20827 205 aaPredicted RBP13.22□□□□□ -0.29
TUBE1-208ENST00000604743 KRT20P35900 424 aa13.22□□□□□ -0.29
TUBE1-208ENST00000604743 CASP3P42574 277 aa13.22□□□□□ -0.29
TUBE1-208ENST00000604743 ASMTP46597 345 aa13.22□□□□□ -0.29
TUBE1-208ENST00000604743 MAGOHP61326 146 aaKnown RBP13.22□□□□□ -0.29
TUBE1-208ENST00000604743 STX3Q13277 289 aa13.22□□□□□ -0.29
TUBE1-208ENST00000604743 TBCELQ5QJ74 424 aa13.22□□□□□ -0.29
TUBE1-208ENST00000604743 C6orf136Q5SQH8 315 aa13.22□□□□□ -0.29
TUBE1-208ENST00000604743 IL23RQ5VWK5 629 aa13.22□□□□□ -0.29
TUBE1-208ENST00000604743 MTFR2Q6P444 385 aa13.22□□□□□ -0.29
TUBE1-208ENST00000604743 MAMDC2Q7Z304 686 aaPredicted RBP13.22□□□□□ -0.29
TUBE1-208ENST00000604743 NUP54Q7Z3B4 507 aa13.22□□□□□ -0.29
TUBE1-208ENST00000604743 WDR53Q7Z5U6 358 aaPredicted RBP13.22□□□□□ -0.29
TUBE1-208ENST00000604743 MRGPRGQ86SM5 289 aa13.22□□□□□ -0.29
TUBE1-208ENST00000604743 SLC44A2Q8IWA5 706 aaPredicted RBP13.22□□□□□ -0.29
TUBE1-208ENST00000604743 ZNF597Q96LX8 424 aa13.22□□□□□ -0.29
TUBE1-208ENST00000604743 PHF12Q96QT6 1004 aa13.22□□□□□ -0.29
TUBE1-208ENST00000604743 NODALQ96S42 347 aa13.22□□□□□ -0.29
TUBE1-208ENST00000604743 TMBIM4Q9HC24 238 aa13.22□□□□□ -0.29
TUBE1-208ENST00000604743 MEMO1Q9Y316 297 aa13.22□□□□□ -0.29
TUBE1-208ENST00000604743 OR10H1Q9Y4A9 318 aa13.22□□□□□ -0.29
TUBE1-208ENST00000604743 NCOA6Q14686 2063 aaPredicted RBP13.22□□□□□ -0.29
TUBE1-208ENST00000604743 ANKRD33BA6NCL7 494 aa13.21□□□□□ -0.29
TUBE1-208ENST00000604743 LRRC3CA6NJW4 275 aa13.21□□□□□ -0.29
TUBE1-208ENST00000604743 CYSRT1A8MQ03 144 aa13.21□□□□□ -0.29
TUBE1-208ENST00000604743 UPK1AO00322 258 aa13.21□□□□□ -0.29
TUBE1-208ENST00000604743 GNB5O14775 395 aa13.21□□□□□ -0.29
TUBE1-208ENST00000604743 UGT2B11O75310 529 aa13.21□□□□□ -0.29
TUBE1-208ENST00000604743 TRAPPC6AO75865 159 aa13.21□□□□□ -0.29
TUBE1-208ENST00000604743 CT45A8P0DMV1 189 aa13.21□□□□□ -0.29
TUBE1-208ENST00000604743 CT45A9P0DMV2 189 aa13.21□□□□□ -0.29
TUBE1-208ENST00000604743 NAGAP17050 411 aa13.21□□□□□ -0.29
TUBE1-208ENST00000604743 GRK2P25098 689 aa13.21□□□□□ -0.29
TUBE1-208ENST00000604743 GDF1P27539 372 aa13.21□□□□□ -0.29
TUBE1-208ENST00000604743 IL12BP29460 328 aa13.21□□□□□ -0.29
TUBE1-208ENST00000604743 TRPC1P48995 793 aa13.21□□□□□ -0.29
TUBE1-208ENST00000604743 MAN2A2P49641 1150 aa13.21□□□□□ -0.29
TUBE1-208ENST00000604743 RPL14P50914 215 aaKnown RBP13.21□□□□□ -0.29
TUBE1-208ENST00000604743 MANFP55145 182 aaKnown RBP13.21□□□□□ -0.29
TUBE1-208ENST00000604743 CASP8Q14790 479 aa13.21□□□□□ -0.29
TUBE1-208ENST00000604743 PTGR1Q14914 329 aa13.21□□□□□ -0.29
TUBE1-208ENST00000604743 TOMM20Q15388 145 aa13.21□□□□□ -0.29
TUBE1-208ENST00000604743 HYAL4Q2M3T9 481 aa13.21□□□□□ -0.29
TUBE1-208ENST00000604743 CT45A2Q5DJT8 189 aa13.21□□□□□ -0.29
TUBE1-208ENST00000604743 NPSR1Q6W5P4 371 aa13.21□□□□□ -0.29
TUBE1-208ENST00000604743 TRILQ7L0X0 811 aa13.21□□□□□ -0.29
TUBE1-208ENST00000604743 SZRD1Q7Z422 152 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms