RNA–Protein interactions for RNA: ENST00000604624.6

KCNMA1-223, Transcript of potassium calcium-activated channel subfamily M alpha 1, human

APPRIS ALT2 TSL 1 (best)

Gene KCNMA1, Length 11,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNMA1-223	ENST00000604624	SGPP2	Q8IWX5	399 aa		3.9	□□□□□ -1.78
KCNMA1-223	ENST00000604624	TC2N	Q8N9U0	490 aa		3.9	□□□□□ -1.78
KCNMA1-223	ENST00000604624	CCDC71L	Q8N9Z2	235 aa		3.9	□□□□□ -1.78
KCNMA1-223	ENST00000604624	OR52H1	Q8NGJ2	320 aa		3.9	□□□□□ -1.78
KCNMA1-223	ENST00000604624	RNF128	Q8TEB7	428 aa		3.9	□□□□□ -1.78
KCNMA1-223	ENST00000604624	SLC22A17	Q8WUG5	538 aa		3.9	□□□□□ -1.78
KCNMA1-223	ENST00000604624	TWIST2	Q8WVJ9	160 aa		3.9	□□□□□ -1.78
KCNMA1-223	ENST00000604624	HNRNPLL	Q8WVV9	542 aa	Known RBP	3.9	□□□□□ -1.78
KCNMA1-223	ENST00000604624	TUBA1C	Q9BQE3	449 aa		3.9	□□□□□ -1.78
KCNMA1-223	ENST00000604624	ELOVL4	Q9GZR5	314 aa		3.9	□□□□□ -1.78
KCNMA1-223	ENST00000604624	NXF5	Q9H1B4	397 aa	Known RBP	3.9	□□□□□ -1.78
KCNMA1-223	ENST00000604624	HES4	Q9HCC6	221 aa		3.9	□□□□□ -1.78
KCNMA1-223	ENST00000604624	POLL	Q9UGP5	575 aa		3.9	□□□□□ -1.78
KCNMA1-223	ENST00000604624	ZFP92	A6NM28	416 aa		3.9	□□□□□ -1.78
KCNMA1-223	ENST00000604624	DNPH1	O43598	174 aa		3.9	□□□□□ -1.78
KCNMA1-223	ENST00000604624	NPHS1	O60500	1241 aa		3.9	□□□□□ -1.78
KCNMA1-223	ENST00000604624	CBX7	O95931	251 aa		3.9	□□□□□ -1.78
KCNMA1-223	ENST00000604624	AMY2A	P04746	511 aa		3.9	□□□□□ -1.78
KCNMA1-223	ENST00000604624	HOXB6	P17509	224 aa	Known RBP	3.9	□□□□□ -1.78
KCNMA1-223	ENST00000604624	PBX2	P40425	430 aa		3.9	□□□□□ -1.78
KCNMA1-223	ENST00000604624	UQCRFS1	P47985	274 aa		3.9	□□□□□ -1.78
KCNMA1-223	ENST00000604624	ERVFC1	P60507	584 aa		3.9	□□□□□ -1.78
KCNMA1-223	ENST00000604624	MRPS10	P82664	201 aa	Known RBP	3.9	□□□□□ -1.78
KCNMA1-223	ENST00000604624	SHC4	Q6S5L8	630 aa		3.9	□□□□□ -1.78
KCNMA1-223	ENST00000604624	ENPP6	Q6UWR7	440 aa		3.9	□□□□□ -1.78
KCNMA1-223	ENST00000604624	SPATA19	Q7Z5L4	167 aa		3.9	□□□□□ -1.78
KCNMA1-223	ENST00000604624	LDB1	Q86U70	411 aa	Predicted RBP	3.9	□□□□□ -1.78
KCNMA1-223	ENST00000604624	CPA6	Q8N4T0	437 aa		3.9	□□□□□ -1.78
KCNMA1-223	ENST00000604624	RELL2	Q8NC24	303 aa	Predicted RBP	3.9	□□□□□ -1.78
KCNMA1-223	ENST00000604624	OR51G2	Q8NGK0	314 aa		3.9	□□□□□ -1.78
KCNMA1-223	ENST00000604624	OR56B4	Q8NH76	319 aa		3.9	□□□□□ -1.78
KCNMA1-223	ENST00000604624	RASD2	Q96D21	266 aa		3.9	□□□□□ -1.78
KCNMA1-223	ENST00000604624	ABCG5	Q9H222	651 aa		3.9	□□□□□ -1.78
KCNMA1-223	ENST00000604624	NT5DC2	Q9H857	520 aa		3.9	□□□□□ -1.78
KCNMA1-223	ENST00000604624	RXFP3	Q9NSD7	469 aa		3.9	□□□□□ -1.78
KCNMA1-223	ENST00000604624	PCDHA9	Q9Y5H5	950 aa		3.9	□□□□□ -1.78
KCNMA1-223	ENST00000604624	MAFB	Q9Y5Q3	323 aa	Predicted RBP	3.9	□□□□□ -1.78
KCNMA1-223	ENST00000604624	LTBP1	Q14766	1721 aa		3.9	□□□□□ -1.78
KCNMA1-223	ENST00000604624	LOC100130705	A0A1B0GUX0	176 aa		3.9	□□□□□ -1.79
KCNMA1-223	ENST00000604624	DRGX	A6NNA5	263 aa		3.9	□□□□□ -1.79
KCNMA1-223	ENST00000604624	FANCG	O15287	622 aa		3.9	□□□□□ -1.79
KCNMA1-223	ENST00000604624	SLC22A5	O76082	557 aa		3.9	□□□□□ -1.79
KCNMA1-223	ENST00000604624	YIF1A	O95070	293 aa		3.9	□□□□□ -1.79
KCNMA1-223	ENST00000604624	OXSR1	O95747	527 aa	Predicted RBP	3.9	□□□□□ -1.79
KCNMA1-223	ENST00000604624	SPP1	P10451	314 aa		3.9	□□□□□ -1.79
KCNMA1-223	ENST00000604624	GNS	P15586	552 aa		3.9	□□□□□ -1.79
KCNMA1-223	ENST00000604624	BST1	Q10588	318 aa		3.9	□□□□□ -1.79
KCNMA1-223	ENST00000604624	TRAM2	Q15035	370 aa		3.9	□□□□□ -1.79
KCNMA1-223	ENST00000604624	ATP6AP1	Q15904	470 aa		3.9	□□□□□ -1.79
KCNMA1-223	ENST00000604624	HYAL4	Q2M3T9	481 aa		3.9	□□□□□ -1.79
KCNMA1-223	ENST00000604624	VIT	Q6UXI7	678 aa		3.9	□□□□□ -1.79
KCNMA1-223	ENST00000604624	HIST2H3A	Q71DI3	136 aa		3.9	□□□□□ -1.79
KCNMA1-223	ENST00000604624	OVCH1	Q7RTY7	1134 aa		3.9	□□□□□ -1.79
KCNMA1-223	ENST00000604624	CARM1	Q86X55	608 aa		3.9	□□□□□ -1.79
KCNMA1-223	ENST00000604624	FBXO16	Q8IX29	292 aa	Predicted RBP	3.9	□□□□□ -1.79
KCNMA1-223	ENST00000604624	SVOPL	Q8N434	492 aa		3.9	□□□□□ -1.79
KCNMA1-223	ENST00000604624	KIAA0895	Q8NCT3	520 aa		3.9	□□□□□ -1.79
KCNMA1-223	ENST00000604624	SMPDL3A	Q92484	453 aa		3.9	□□□□□ -1.79
KCNMA1-223	ENST00000604624	DPF2	Q92785	391 aa		3.9	□□□□□ -1.79
KCNMA1-223	ENST00000604624	FAM46B	Q96A09	425 aa		3.9	□□□□□ -1.79
KCNMA1-223	ENST00000604624	SLC35G5	Q96KT7	338 aa		3.9	□□□□□ -1.79
KCNMA1-223	ENST00000604624	SORBS1	Q9BX66	1292 aa	Known RBP	3.9	□□□□□ -1.79
KCNMA1-223	ENST00000604624	ITPA	Q9BY32	194 aa		3.9	□□□□□ -1.79
KCNMA1-223	ENST00000604624	PITHD1	Q9GZP4	211 aa	Predicted RBP	3.9	□□□□□ -1.79
KCNMA1-223	ENST00000604624	CHST11	Q9NPF2	352 aa		3.9	□□□□□ -1.79
KCNMA1-223	ENST00000604624	ABCC13	Q9NSE7	274 aa		3.9	□□□□□ -1.79
KCNMA1-223	ENST00000604624	FKBPL	Q9UIM3	349 aa		3.9	□□□□□ -1.79
KCNMA1-223	ENST00000604624	GAB2	Q9UQC2	676 aa		3.9	□□□□□ -1.79
KCNMA1-223	ENST00000604624	TMX2	Q9Y320	296 aa		3.9	□□□□□ -1.79
KCNMA1-223	ENST00000604624	FAM96B	Q9Y3D0	163 aa		3.9	□□□□□ -1.79
KCNMA1-223	ENST00000604624	MATN3	O15232	486 aa		3.9	□□□□□ -1.79
KCNMA1-223	ENST00000604624	SLC22A2	O15244	555 aa		3.9	□□□□□ -1.79
KCNMA1-223	ENST00000604624	MED6	O75586	246 aa		3.9	□□□□□ -1.79
KCNMA1-223	ENST00000604624	TGDS	O95455	350 aa		3.9	□□□□□ -1.79
KCNMA1-223	ENST00000604624	SYNGR4	O95473	234 aa		3.9	□□□□□ -1.79
KCNMA1-223	ENST00000604624	SHBG	P04278	402 aa		3.9	□□□□□ -1.79
KCNMA1-223	ENST00000604624	BCKDHB	P21953	392 aa		3.9	□□□□□ -1.79
KCNMA1-223	ENST00000604624	HSPA7	P48741	367 aa		3.9	□□□□□ -1.79
KCNMA1-223	ENST00000604624	RAB8A	P61006	207 aa		3.9	□□□□□ -1.79
KCNMA1-223	ENST00000604624	GRB10	Q13322	594 aa		3.9	□□□□□ -1.79
KCNMA1-223	ENST00000604624	SNTB2	Q13425	540 aa	Known RBP	3.9	□□□□□ -1.79
KCNMA1-223	ENST00000604624	KIAA0319	Q5VV43	1072 aa		3.9	□□□□□ -1.79
KCNMA1-223	ENST00000604624	REM2	Q8IYK8	340 aa	Predicted RBP	3.9	□□□□□ -1.79
KCNMA1-223	ENST00000604624	NECAP1	Q8NC96	275 aa		3.9	□□□□□ -1.79
KCNMA1-223	ENST00000604624	ARRDC4	Q8NCT1	418 aa		3.9	□□□□□ -1.79
KCNMA1-223	ENST00000604624	PLPP5	Q8NEB5	264 aa		3.9	□□□□□ -1.79
KCNMA1-223	ENST00000604624	OR51T1	Q8NGJ9	327 aa		3.9	□□□□□ -1.79
KCNMA1-223	ENST00000604624	SYN2	Q92777	582 aa	Predicted RBP	3.9	□□□□□ -1.79
KCNMA1-223	ENST00000604624	SCPEP1	Q9HB40	452 aa		3.9	□□□□□ -1.79
KCNMA1-223	ENST00000604624	S100A14	Q9HCY8	104 aa		3.9	□□□□□ -1.79
KCNMA1-223	ENST00000604624	CNTN6	Q9UQ52	1028 aa		3.9	□□□□□ -1.79
KCNMA1-223	ENST00000604624	DNAJB6	O75190	326 aa		3.9	□□□□□ -1.79
KCNMA1-223	ENST00000604624	AK1	P00568	194 aa		3.9	□□□□□ -1.79
KCNMA1-223	ENST00000604624	ALDOB	P05062	364 aa		3.9	□□□□□ -1.79
KCNMA1-223	ENST00000604624	ADRB2	P07550	413 aa		3.9	□□□□□ -1.79
KCNMA1-223	ENST00000604624	H2BFM	P0C1H6	154 aa		3.9	□□□□□ -1.79
KCNMA1-223	ENST00000604624	CPN1	P15169	458 aa		3.9	□□□□□ -1.79
KCNMA1-223	ENST00000604624	GABRA2	P47869	451 aa		3.9	□□□□□ -1.79
KCNMA1-223	ENST00000604624	FCGRT	P55899	365 aa		3.9	□□□□□ -1.79
KCNMA1-223	ENST00000604624	ZNF280A	P59817	542 aa	Predicted RBP	3.9	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms