RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 PPICP45877 212 aa11.98□□□□□ -0.49
RPS28-204ENST00000602140 SLCO1A2P46721 670 aa11.98□□□□□ -0.49
RPS28-204ENST00000602140 EMDP50402 254 aa11.98□□□□□ -0.49
RPS28-204ENST00000602140 DCAF7P61962 342 aa11.98□□□□□ -0.49
RPS28-204ENST00000602140 MRPS35P82673 323 aaKnown RBP11.98□□□□□ -0.49
RPS28-204ENST00000602140 SRYQ05066 204 aa11.98□□□□□ -0.49
RPS28-204ENST00000602140 SNTA1Q13424 505 aa11.98□□□□□ -0.49
RPS28-204ENST00000602140 C1orf52Q8N6N3 182 aaKnown RBP11.98□□□□□ -0.49
RPS28-204ENST00000602140 WDSUB1Q8N9V3 476 aa11.98□□□□□ -0.49
RPS28-204ENST00000602140 OR14L1PQ8NHC6 308 aa11.98□□□□□ -0.49
RPS28-204ENST00000602140 RDH11Q8TC12 318 aa11.98□□□□□ -0.49
RPS28-204ENST00000602140 CNRIP1Q96F85 164 aaPredicted RBP11.98□□□□□ -0.49
RPS28-204ENST00000602140 ZNF681Q96N22 645 aa11.98□□□□□ -0.49
RPS28-204ENST00000602140 TUBA1CQ9BQE3 449 aa11.98□□□□□ -0.49
RPS28-204ENST00000602140 FAIM2Q9BWQ8 316 aa11.98□□□□□ -0.49
RPS28-204ENST00000602140 NMRK1Q9NWW6 199 aa11.98□□□□□ -0.49
RPS28-204ENST00000602140 JKAMPQ9P055 326 aa11.98□□□□□ -0.49
RPS28-204ENST00000602140 PRODH2Q9UF12 536 aa11.98□□□□□ -0.49
RPS28-204ENST00000602140 ZNF225Q9UK10 706 aa11.98□□□□□ -0.49
RPS28-204ENST00000602140 EXO1Q9UQ84 846 aaKnown RBP11.98□□□□□ -0.49
RPS28-204ENST00000602140 FRG2CA6NGY1 282 aa11.97□□□□□ -0.49
RPS28-204ENST00000602140 TRIM49D1C9J1S8 452 aa11.97□□□□□ -0.49
RPS28-204ENST00000602140 H0Y3Z8 333 aa11.97□□□□□ -0.49
RPS28-204ENST00000602140 ESRRBO95718 433 aa11.97□□□□□ -0.49
RPS28-204ENST00000602140 SBK3P0C264 359 aa11.97□□□□□ -0.49
RPS28-204ENST00000602140 CPN1P15169 458 aa11.97□□□□□ -0.49
RPS28-204ENST00000602140 HSD17B3P37058 310 aa11.97□□□□□ -0.49
RPS28-204ENST00000602140 TRA2BP62995 288 aaKnown RBP11.97□□□□□ -0.49
RPS28-204ENST00000602140 SORDQ00796 357 aa11.97□□□□□ -0.49
RPS28-204ENST00000602140 FOXF2Q12947 444 aa11.97□□□□□ -0.49
RPS28-204ENST00000602140 FOXD4Q12950 439 aaPredicted RBP11.97□□□□□ -0.49
RPS28-204ENST00000602140 KRTAP21-3Q3LHN1 58 aa11.97□□□□□ -0.49
RPS28-204ENST00000602140 TCHHL1Q5QJ38 904 aaPredicted RBP11.97□□□□□ -0.49
RPS28-204ENST00000602140 TEX35Q5T0J7 233 aa11.97□□□□□ -0.49
RPS28-204ENST00000602140 ENPP6Q6UWR7 440 aa11.97□□□□□ -0.49
RPS28-204ENST00000602140 PAMR1Q6UXH9 720 aa11.97□□□□□ -0.49
RPS28-204ENST00000602140 TRIM42Q8IWZ5 723 aa11.97□□□□□ -0.49
RPS28-204ENST00000602140 TMEM151AQ8N4L1 468 aa11.97□□□□□ -0.49
RPS28-204ENST00000602140 UHMK1Q8TAS1 419 aaKnown RBP11.97□□□□□ -0.49
RPS28-204ENST00000602140 DCAKDQ8WVC6 231 aa11.97□□□□□ -0.49
RPS28-204ENST00000602140 TMBIM1Q969X1 311 aa11.97□□□□□ -0.49
RPS28-204ENST00000602140 POM121Q96HA1 1249 aa11.97□□□□□ -0.49
RPS28-204ENST00000602140 COL21A1Q96P44 957 aa11.97□□□□□ -0.49
RPS28-204ENST00000602140 ALPK1Q96QP1 1244 aa11.97□□□□□ -0.49
RPS28-204ENST00000602140 C1QTNF3Q9BXJ4 246 aa11.97□□□□□ -0.49
RPS28-204ENST00000602140 OR2B2Q9GZK3 357 aa11.97□□□□□ -0.49
RPS28-204ENST00000602140 ANKRA2Q9H9E1 313 aa11.97□□□□□ -0.49
RPS28-204ENST00000602140 PFDN4Q9NQP4 134 aa11.97□□□□□ -0.49
RPS28-204ENST00000602140 HEY2Q9UBP5 337 aa11.97□□□□□ -0.49
RPS28-204ENST00000602140 VPS29Q9UBQ0 182 aa11.97□□□□□ -0.49
RPS28-204ENST00000602140 TRPS1Q9UHF7 1281 aa11.97□□□□□ -0.49
RPS28-204ENST00000602140 DMGDHQ9UI17 866 aaKnown RBP11.97□□□□□ -0.49
RPS28-204ENST00000602140 ZNF180Q9UJW8 692 aa11.97□□□□□ -0.49
RPS28-204ENST00000602140 UTS2RQ9UKP6 389 aa11.97□□□□□ -0.49
RPS28-204ENST00000602140 ZNF469Q96JG9 3925 aaPredicted RBP11.97□□□□□ -0.49
RPS28-204ENST00000602140 NIPBLQ6KC79 2804 aaeCLIP11.96□□□□□ -0.49
RPS28-204ENST00000602140 OR6C70A6NIJ9 312 aa11.96□□□□□ -0.49
RPS28-204ENST00000602140 MANBAO00462 879 aa11.96□□□□□ -0.49
RPS28-204ENST00000602140 TO15178 435 aa11.96□□□□□ -0.49
RPS28-204ENST00000602140 NME6O75414 186 aaPredicted RBP11.96□□□□□ -0.49
RPS28-204ENST00000602140 ERN1O75460 977 aaKnown RBP11.96□□□□□ -0.49
RPS28-204ENST00000602140 REM1O75628 298 aa11.96□□□□□ -0.49
RPS28-204ENST00000602140 URI1O94763 535 aaPredicted RBP11.96□□□□□ -0.49
RPS28-204ENST00000602140 RAF1P04049 648 aa11.96□□□□□ -0.49
RPS28-204ENST00000602140 CHN1P15882 459 aa11.96□□□□□ -0.49
RPS28-204ENST00000602140 HMGCS1Q01581 520 aa11.96□□□□□ -0.49
RPS28-204ENST00000602140 CLCQ05315 142 aa11.96□□□□□ -0.49
RPS28-204ENST00000602140 PLXDC2Q6UX71 529 aa11.96□□□□□ -0.49
RPS28-204ENST00000602140 CAMKMTQ7Z624 323 aa11.96□□□□□ -0.49
RPS28-204ENST00000602140 LUZP2Q86TE4 346 aa11.96□□□□□ -0.49
RPS28-204ENST00000602140 IFNEQ86WN2 208 aa11.96□□□□□ -0.49
RPS28-204ENST00000602140 PLCZ1Q86YW0 608 aa11.96□□□□□ -0.49
RPS28-204ENST00000602140 CCDC116Q8IYX3 515 aa11.96□□□□□ -0.49
RPS28-204ENST00000602140 CDYL2Q8N8U2 506 aa11.96□□□□□ -0.49
RPS28-204ENST00000602140 IFT81Q8WYA0 676 aa11.96□□□□□ -0.49
RPS28-204ENST00000602140 TMCO6Q96DC7 493 aa11.96□□□□□ -0.49
RPS28-204ENST00000602140 MBD6Q96DN6 1003 aa11.96□□□□□ -0.49
RPS28-204ENST00000602140 FMO2Q99518 471 aa11.96□□□□□ -0.49
RPS28-204ENST00000602140 TM9SF2Q99805 663 aa11.96□□□□□ -0.49
RPS28-204ENST00000602140 RBM24Q9BX46 236 aaKnown RBP11.96□□□□□ -0.49
RPS28-204ENST00000602140 TSPYL1Q9H0U9 437 aa11.96□□□□□ -0.49
RPS28-204ENST00000602140 TAS2R10Q9NYW0 307 aa11.96□□□□□ -0.49
RPS28-204ENST00000602140 DLGAP4Q9Y2H0 992 aa11.96□□□□□ -0.49
RPS28-204ENST00000602140 GPR55Q9Y2T6 319 aaPredicted RBP11.96□□□□□ -0.49
RPS28-204ENST00000602140 CLCA1A8K7I4 914 aa11.95□□□□□ -0.5
RPS28-204ENST00000602140 SUPT7LO94864 414 aa11.95□□□□□ -0.5
RPS28-204ENST00000602140 RCBTB2O95199 551 aa11.95□□□□□ -0.5
RPS28-204ENST00000602140 KRT6AP02538 564 aa11.95□□□□□ -0.5
RPS28-204ENST00000602140 KRT6BP04259 564 aa11.95□□□□□ -0.5
RPS28-204ENST00000602140 IL3P08700 152 aa11.95□□□□□ -0.5
RPS28-204ENST00000602140 SNRPAP09012 282 aaKnown RBP11.95□□□□□ -0.5
RPS28-204ENST00000602140 CT45A8P0DMV1 189 aa11.95□□□□□ -0.5
RPS28-204ENST00000602140 CT45A9P0DMV2 189 aa11.95□□□□□ -0.5
RPS28-204ENST00000602140 HSD3B1P14060 373 aa11.95□□□□□ -0.5
RPS28-204ENST00000602140 DRD2P14416 443 aa11.95□□□□□ -0.5
RPS28-204ENST00000602140 HSD3B2P26439 372 aa11.95□□□□□ -0.5
RPS28-204ENST00000602140 KRT6CP48668 564 aa11.95□□□□□ -0.5
RPS28-204ENST00000602140 STARP49675 285 aa11.95□□□□□ -0.5
RPS28-204ENST00000602140 GFRA1P56159 465 aa11.95□□□□□ -0.5
RPS28-204ENST00000602140 CORO7P57737 925 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms