RNA–Protein interactions for RNA: ENST00000601373.5

IRF3-229, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-229ENST00000601373 MC2RQ01718 297 aa12.79□□□□□ -0.36
IRF3-229ENST00000601373 COL9A2Q14055 689 aaPredicted RBP12.79□□□□□ -0.36
IRF3-229ENST00000601373 MAPK11Q15759 364 aa12.79□□□□□ -0.36
IRF3-229ENST00000601373 SYPL1Q16563 259 aa12.79□□□□□ -0.36
IRF3-229ENST00000601373 GPAT3Q53EU6 434 aa12.79□□□□□ -0.36
IRF3-229ENST00000601373 CMPK2Q5EBM0 449 aa12.79□□□□□ -0.36
IRF3-229ENST00000601373 EXOSC6Q5RKV6 272 aaKnown RBP12.79□□□□□ -0.36
IRF3-229ENST00000601373 C1orf189Q5VU69 101 aa12.79□□□□□ -0.36
IRF3-229ENST00000601373 HEPHL1Q6MZM0 1159 aa12.79□□□□□ -0.36
IRF3-229ENST00000601373 PWWP2BQ6NUJ5 590 aa12.79□□□□□ -0.36
IRF3-229ENST00000601373 PPP4R4Q6NUP7 873 aa12.79□□□□□ -0.36
IRF3-229ENST00000601373 UNQ6494/PRO21346Q6UXR6 183 aa12.79□□□□□ -0.36
IRF3-229ENST00000601373 RBM44Q6ZP01 1051 aaKnown RBP12.79□□□□□ -0.36
IRF3-229ENST00000601373 ZBTB49Q6ZSB9 765 aa12.79□□□□□ -0.36
IRF3-229ENST00000601373 C16orf62Q7Z3J2 963 aa12.79□□□□□ -0.36
IRF3-229ENST00000601373 PLPP5Q8NEB5 264 aa12.79□□□□□ -0.36
IRF3-229ENST00000601373 OR7G1Q8NGA0 311 aa12.79□□□□□ -0.36
IRF3-229ENST00000601373 SLC35A4Q96G79 324 aa12.79□□□□□ -0.36
IRF3-229ENST00000601373 TREX2Q9BQ50 279 aaPredicted RBP12.79□□□□□ -0.36
IRF3-229ENST00000601373 NECTIN3Q9NQS3 549 aa12.79□□□□□ -0.36
IRF3-229ENST00000601373 DUSP22Q9NRW4 184 aa12.79□□□□□ -0.36
IRF3-229ENST00000601373 OCIAD1Q9NX40 245 aa12.79□□□□□ -0.36
IRF3-229ENST00000601373 PADI2Q9Y2J8 665 aa12.79□□□□□ -0.36
IRF3-229ENST00000601373 GPC6Q9Y625 555 aaPredicted RBP12.79□□□□□ -0.36
IRF3-229ENST00000601373 IGKV3D-11A0A0A0MRZ8 115 aa12.78□□□□□ -0.36
IRF3-229ENST00000601373 MYOCOSA0A1B0GUC4 107 aa12.78□□□□□ -0.36
IRF3-229ENST00000601373 PRAMEF27A3QJZ7 478 aa12.78□□□□□ -0.36
IRF3-229ENST00000601373 FAM149AA5PLN7 773 aa12.78□□□□□ -0.36
IRF3-229ENST00000601373 B4E171 279 aa12.78□□□□□ -0.36
IRF3-229ENST00000601373 TGFBR3LH3BV60 316 aa12.78□□□□□ -0.36
IRF3-229ENST00000601373 PRAMEF2O60811 474 aa12.78□□□□□ -0.36
IRF3-229ENST00000601373 CBFA2T3O75081 653 aa12.78□□□□□ -0.36
IRF3-229ENST00000601373 JRKO75564 520 aa12.78□□□□□ -0.36
IRF3-229ENST00000601373 MFN2O95140 757 aa12.78□□□□□ -0.36
IRF3-229ENST00000601373 CT62P0C5K7 136 aa12.78□□□□□ -0.36
IRF3-229ENST00000601373 ITGA2P17301 1181 aa12.78□□□□□ -0.36
IRF3-229ENST00000601373 S1PR1P21453 382 aa12.78□□□□□ -0.36
IRF3-229ENST00000601373 TSPAN7P41732 249 aa12.78□□□□□ -0.36
IRF3-229ENST00000601373 HSPA13P48723 471 aa12.78□□□□□ -0.36
IRF3-229ENST00000601373 KCNJ10P78508 379 aa12.78□□□□□ -0.36
IRF3-229ENST00000601373 DCDP81605 110 aaKnown RBP12.78□□□□□ -0.36
IRF3-229ENST00000601373 HPCAP84074 193 aa12.78□□□□□ -0.36
IRF3-229ENST00000601373 OCA2Q04671 838 aa12.78□□□□□ -0.36
IRF3-229ENST00000601373 FUT7Q11130 342 aa12.78□□□□□ -0.36
IRF3-229ENST00000601373 ZNF267Q14586 743 aaPredicted RBP12.78□□□□□ -0.36
IRF3-229ENST00000601373 TAF11Q15544 211 aa12.78□□□□□ -0.36
IRF3-229ENST00000601373 ZNHIT3Q15649 155 aaPredicted RBP12.78□□□□□ -0.36
IRF3-229ENST00000601373 ARHGAP11BQ3KRB8 267 aa12.78□□□□□ -0.36
IRF3-229ENST00000601373 MINDY4Q4G0A6 757 aa12.78□□□□□ -0.36
IRF3-229ENST00000601373 NKAIN1Q4KMZ8 207 aa12.78□□□□□ -0.36
IRF3-229ENST00000601373 WLSQ5T9L3 541 aa12.78□□□□□ -0.36
IRF3-229ENST00000601373 MFSD4BQ5TF39 518 aa12.78□□□□□ -0.36
IRF3-229ENST00000601373 VTCN1Q7Z7D3 282 aa12.78□□□□□ -0.36
IRF3-229ENST00000601373 B3GNT8Q7Z7M8 397 aa12.78□□□□□ -0.36
IRF3-229ENST00000601373 GALNT10Q86SR1 603 aa12.78□□□□□ -0.36
IRF3-229ENST00000601373 SVOPLQ8N434 492 aa12.78□□□□□ -0.36
IRF3-229ENST00000601373 BMPERQ8N8U9 685 aa12.78□□□□□ -0.36
IRF3-229ENST00000601373 SLC16A11Q8NCK7 471 aa12.78□□□□□ -0.36
IRF3-229ENST00000601373 OR52R1Q8NGF1 315 aa12.78□□□□□ -0.36
IRF3-229ENST00000601373 SPPL2AQ8TCT8 520 aa12.78□□□□□ -0.36
IRF3-229ENST00000601373 GEMIN6Q8WXD5 167 aaKnown RBP12.78□□□□□ -0.36
IRF3-229ENST00000601373 SLC9A6Q92581 669 aa12.78□□□□□ -0.36
IRF3-229ENST00000601373 HOXB13Q92826 284 aaPredicted RBP12.78□□□□□ -0.36
IRF3-229ENST00000601373 PMM1Q92871 262 aa12.78□□□□□ -0.36
IRF3-229ENST00000601373 VPS50Q96JG6 964 aa12.78□□□□□ -0.36
IRF3-229ENST00000601373 BTBD9Q96Q07 612 aa12.78□□□□□ -0.36
IRF3-229ENST00000601373 ZNF347Q96SE7 839 aa12.78□□□□□ -0.36
IRF3-229ENST00000601373 STRADBQ9C0K7 418 aa12.78□□□□□ -0.36
IRF3-229ENST00000601373 COQ10BQ9H8M1 238 aa12.78□□□□□ -0.36
IRF3-229ENST00000601373 ANKRA2Q9H9E1 313 aa12.78□□□□□ -0.36
IRF3-229ENST00000601373 C14orf105Q9NVL8 296 aa12.78□□□□□ -0.36
IRF3-229ENST00000601373 ZMIZ1Q9ULJ6 1067 aa12.78□□□□□ -0.36
IRF3-229ENST00000601373 SATB2Q9UPW6 733 aa12.78□□□□□ -0.36
IRF3-229ENST00000601373 PCDHGA8Q9Y5G5 932 aa12.78□□□□□ -0.36
IRF3-229ENST00000601373 ASCC3Q8N3C0 2202 aaKnown RBP12.78□□□□□ -0.36
IRF3-229ENST00000601373 SAC3D1A6NKF1 404 aa12.77□□□□□ -0.37
IRF3-229ENST00000601373 TMEM229AB2RXF0 380 aa12.77□□□□□ -0.37
IRF3-229ENST00000601373 HYAL3O43820 417 aaPredicted RBP12.77□□□□□ -0.37
IRF3-229ENST00000601373 CPNE3O75131 537 aaKnown RBP12.77□□□□□ -0.37
IRF3-229ENST00000601373 RFPL3O75679 317 aa12.77□□□□□ -0.37
IRF3-229ENST00000601373 CBX7O95931 251 aa12.77□□□□□ -0.37
IRF3-229ENST00000601373 ALBP02768 609 aa12.77□□□□□ -0.37
IRF3-229ENST00000601373 MT-ND1P03886 318 aa12.77□□□□□ -0.37
IRF3-229ENST00000601373 OPN1SWP03999 348 aa12.77□□□□□ -0.37
IRF3-229ENST00000601373 GUSBP08236 651 aa12.77□□□□□ -0.37
IRF3-229ENST00000601373 CYC1P08574 325 aa12.77□□□□□ -0.37
IRF3-229ENST00000601373 ACP2P11117 423 aa12.77□□□□□ -0.37
IRF3-229ENST00000601373 ZNF26P17031 533 aaPredicted RBP12.77□□□□□ -0.37
IRF3-229ENST00000601373 AGXTP21549 392 aa12.77□□□□□ -0.37
IRF3-229ENST00000601373 MAP3K8P41279 467 aa12.77□□□□□ -0.37
IRF3-229ENST00000601373 KCNJ5P48544 419 aa12.77□□□□□ -0.37
IRF3-229ENST00000601373 RHAGQ02094 409 aa12.77□□□□□ -0.37
IRF3-229ENST00000601373 KCNC4Q03721 635 aa12.77□□□□□ -0.37
IRF3-229ENST00000601373 EXOSC7Q15024 291 aaKnown RBP12.77□□□□□ -0.37
IRF3-229ENST00000601373 SFT2D3Q587I9 215 aa12.77□□□□□ -0.37
IRF3-229ENST00000601373 RPS26P11Q5JNZ5 115 aaPredicted RBP12.77□□□□□ -0.37
IRF3-229ENST00000601373 OR2T5Q6IEZ7 315 aa12.77□□□□□ -0.37
IRF3-229ENST00000601373 DGAT2L6Q6ZPD8 337 aa12.77□□□□□ -0.37
IRF3-229ENST00000601373 OVCH1Q7RTY7 1134 aa12.77□□□□□ -0.37
IRF3-229ENST00000601373 TMEM151BQ8IW70 566 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms