RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 PRDX6P30041 224 aa18.51■□□□□ 0.55
SHKBP1-222ENST00000600320 MAP3K8P41279 467 aa18.51■□□□□ 0.55
SHKBP1-222ENST00000600320 PPICP45877 212 aa18.51■□□□□ 0.55
SHKBP1-222ENST00000600320 PRIM2P49643 509 aa18.51■□□□□ 0.55
SHKBP1-222ENST00000600320 NFYCQ13952 458 aa18.51■□□□□ 0.55
SHKBP1-222ENST00000600320 MEP1AQ16819 746 aa18.51■□□□□ 0.55
SHKBP1-222ENST00000600320 CT45A2Q5DJT8 189 aa18.51■□□□□ 0.55
SHKBP1-222ENST00000600320 COQ5Q5HYK3 327 aa18.51■□□□□ 0.55
SHKBP1-222ENST00000600320 ACER2Q5QJU3 275 aa18.51■□□□□ 0.55
SHKBP1-222ENST00000600320 HLA-DQA1Q5Y7H0 255 aa18.51■□□□□ 0.55
SHKBP1-222ENST00000600320 LINC00696Q6ZRV3 163 aa18.51■□□□□ 0.55
SHKBP1-222ENST00000600320 DHDDSQ86SQ9 333 aa18.51■□□□□ 0.55
SHKBP1-222ENST00000600320 LGI4Q8N135 537 aa18.51■□□□□ 0.55
SHKBP1-222ENST00000600320 BEST3Q8N1M1 668 aa18.51■□□□□ 0.55
SHKBP1-222ENST00000600320 PNPT1Q8TCS8 783 aaKnown RBP18.51■□□□□ 0.55
SHKBP1-222ENST00000600320 NEURL3Q96EH8 262 aa18.51■□□□□ 0.55
SHKBP1-222ENST00000600320 SLC35G5Q96KT7 338 aa18.51■□□□□ 0.55
SHKBP1-222ENST00000600320 ZNF354BQ96LW1 612 aa18.51■□□□□ 0.55
SHKBP1-222ENST00000600320 BTBD9Q96Q07 612 aa18.51■□□□□ 0.55
SHKBP1-222ENST00000600320 LMF1Q96S06 567 aa18.51■□□□□ 0.55
SHKBP1-222ENST00000600320 IL1RL2Q9HB29 575 aa18.51■□□□□ 0.55
SHKBP1-222ENST00000600320 K7EM74 188 aa18.5■□□□□ 0.55
SHKBP1-222ENST00000600320 FXYD1O00168 92 aa18.5■□□□□ 0.55
SHKBP1-222ENST00000600320 ITGA10O75578 1167 aa18.5■□□□□ 0.55
SHKBP1-222ENST00000600320 OR2J2O76002 312 aa18.5■□□□□ 0.55
SHKBP1-222ENST00000600320 PDGFAP04085 211 aa18.5■□□□□ 0.55
SHKBP1-222ENST00000600320 DRD5P21918 477 aa18.5■□□□□ 0.55
SHKBP1-222ENST00000600320 CHI3L1P36222 383 aaPredicted RBP18.5■□□□□ 0.55
SHKBP1-222ENST00000600320 CPA2P48052 419 aa18.5■□□□□ 0.55
SHKBP1-222ENST00000600320 STX5Q13190 355 aa18.5■□□□□ 0.55
SHKBP1-222ENST00000600320 DUSP5Q16690 384 aa18.5■□□□□ 0.55
SHKBP1-222ENST00000600320 MMEL1Q495T6 779 aa18.5■□□□□ 0.55
SHKBP1-222ENST00000600320 PIGGQ5H8A4 983 aa18.5■□□□□ 0.55
SHKBP1-222ENST00000600320 ZNF468Q5VIY5 522 aaPredicted RBP18.5■□□□□ 0.55
SHKBP1-222ENST00000600320 AGAP7PQ5VUJ5 663 aa18.5■□□□□ 0.55
SHKBP1-222ENST00000600320 CDC73Q6P1J9 531 aa18.5■□□□□ 0.55
SHKBP1-222ENST00000600320 LYPD8Q6UX82 237 aa18.5■□□□□ 0.55
SHKBP1-222ENST00000600320 ISLR2Q6UXK2 745 aa18.5■□□□□ 0.55
SHKBP1-222ENST00000600320 TRIML2Q8N7C3 387 aa18.5■□□□□ 0.55
SHKBP1-222ENST00000600320 CDRT4Q8N9R6 151 aa18.5■□□□□ 0.55
SHKBP1-222ENST00000600320 SLC16A11Q8NCK7 471 aa18.5■□□□□ 0.55
SHKBP1-222ENST00000600320 TP53INP1Q96A56 240 aa18.5■□□□□ 0.55
SHKBP1-222ENST00000600320 LCORQ96JN0 433 aaPredicted RBP18.5■□□□□ 0.55
SHKBP1-222ENST00000600320 AGAP4Q96P64 663 aa18.5■□□□□ 0.55
SHKBP1-222ENST00000600320 RASL10BQ96S79 203 aa18.5■□□□□ 0.55
SHKBP1-222ENST00000600320 ACTRT3Q9BYD9 372 aa18.5■□□□□ 0.55
SHKBP1-222ENST00000600320 TPT1P8Q9HAU6 139 aa18.5■□□□□ 0.55
SHKBP1-222ENST00000600320 CPAMD8Q8IZJ3 1885 aa18.5■□□□□ 0.55
SHKBP1-222ENST00000600320 GXYLT2A0PJZ3 443 aa18.49■□□□□ 0.55
SHKBP1-222ENST00000600320 FRG2CA6NGY1 282 aa18.49■□□□□ 0.55
SHKBP1-222ENST00000600320 NKX2-2O95096 273 aa18.49■□□□□ 0.55
SHKBP1-222ENST00000600320 UNC5CO95185 931 aa18.49■□□□□ 0.55
SHKBP1-222ENST00000600320 MATN1P21941 496 aa18.49■□□□□ 0.55
SHKBP1-222ENST00000600320 MAN2A2P49641 1150 aa18.49■□□□□ 0.55
SHKBP1-222ENST00000600320 MVDP53602 400 aa18.49■□□□□ 0.55
SHKBP1-222ENST00000600320 DCAF7P61962 342 aa18.49■□□□□ 0.55
SHKBP1-222ENST00000600320 MFAP5Q13361 173 aa18.49■□□□□ 0.55
SHKBP1-222ENST00000600320 CAPRIN1Q14444 709 aaKnown RBP18.49■□□□□ 0.55
SHKBP1-222ENST00000600320 COX20Q5RI15 118 aa18.49■□□□□ 0.55
SHKBP1-222ENST00000600320 ABHD17BQ5VST6 288 aa18.49■□□□□ 0.55
SHKBP1-222ENST00000600320 ZCCHC12Q6PEW1 402 aa18.49■□□□□ 0.55
SHKBP1-222ENST00000600320 BHLHB9Q6PI77 547 aa18.49■□□□□ 0.55
SHKBP1-222ENST00000600320 RNF130Q86XS8 419 aa18.49■□□□□ 0.55
SHKBP1-222ENST00000600320 SLC44A2Q8IWA5 706 aaPredicted RBP18.49■□□□□ 0.55
SHKBP1-222ENST00000600320 PRR22Q8IZ63 422 aa18.49■□□□□ 0.55
SHKBP1-222ENST00000600320 C17orf47Q8NEP4 570 aa18.49■□□□□ 0.55
SHKBP1-222ENST00000600320 OR4N2Q8NGD1 307 aa18.49■□□□□ 0.55
SHKBP1-222ENST00000600320 OR5D16Q8NGK9 328 aa18.49■□□□□ 0.55
SHKBP1-222ENST00000600320 SLC9A6Q92581 669 aa18.49■□□□□ 0.55
SHKBP1-222ENST00000600320 CMTM5Q96DZ9 223 aa18.49■□□□□ 0.55
SHKBP1-222ENST00000600320 OR7D2Q96RA2 312 aa18.49■□□□□ 0.55
SHKBP1-222ENST00000600320 SMAD5Q99717 465 aaKnown RBP18.49■□□□□ 0.55
SHKBP1-222ENST00000600320 CPPED1Q9BRF8 314 aaPredicted RBP18.49■□□□□ 0.55
SHKBP1-222ENST00000600320 TRIM8Q9BZR9 551 aa18.49■□□□□ 0.55
SHKBP1-222ENST00000600320 IKZF5Q9H5V7 419 aa18.49■□□□□ 0.55
SHKBP1-222ENST00000600320 PLA2G3Q9NZ20 509 aa18.49■□□□□ 0.55
SHKBP1-222ENST00000600320 STMN3Q9NZ72 180 aa18.49■□□□□ 0.55
SHKBP1-222ENST00000600320 PCDHGA9Q9Y5G4 932 aaKnown RBP18.49■□□□□ 0.55
SHKBP1-222ENST00000600320 KCNE3Q9Y6H6 103 aa18.49■□□□□ 0.55
SHKBP1-222ENST00000600320 CLIC1O00299 241 aa18.48■□□□□ 0.55
SHKBP1-222ENST00000600320 AIM2O14862 343 aa18.48■□□□□ 0.55
SHKBP1-222ENST00000600320 TO15178 435 aa18.48■□□□□ 0.55
SHKBP1-222ENST00000600320 CBX6O95503 412 aa18.48■□□□□ 0.55
SHKBP1-222ENST00000600320 F10P00742 488 aa18.48■□□□□ 0.55
SHKBP1-222ENST00000600320 FAM87AP0C7U9 286 aa18.48■□□□□ 0.55
SHKBP1-222ENST00000600320 GABRA3P34903 492 aa18.48■□□□□ 0.55
SHKBP1-222ENST00000600320 KRT72Q14CN4 511 aa18.48■□□□□ 0.55
SHKBP1-222ENST00000600320 TRMT5Q32P41 509 aaKnown RBP18.48■□□□□ 0.55
SHKBP1-222ENST00000600320 RUNDC3AQ59EK9 446 aa18.48■□□□□ 0.55
SHKBP1-222ENST00000600320 TNFAIP8L2Q6P589 184 aaPredicted RBP18.48■□□□□ 0.55
SHKBP1-222ENST00000600320 TRPM8Q7Z2W7 1104 aa18.48■□□□□ 0.55
SHKBP1-222ENST00000600320 C10orf111Q8N326 155 aa18.48■□□□□ 0.55
SHKBP1-222ENST00000600320 HORMAD2Q8N7B1 307 aa18.48■□□□□ 0.55
SHKBP1-222ENST00000600320 PIK3R3Q92569 461 aa18.48■□□□□ 0.55
SHKBP1-222ENST00000600320 JADE3Q92613 823 aa18.48■□□□□ 0.55
SHKBP1-222ENST00000600320 LRRC58Q96CX6 371 aa18.48■□□□□ 0.55
SHKBP1-222ENST00000600320 SLC35A4Q96G79 324 aa18.48■□□□□ 0.55
SHKBP1-222ENST00000600320 CGREF1Q99674 301 aa18.48■□□□□ 0.55
SHKBP1-222ENST00000600320 SLC39A3Q9BRY0 314 aa18.48■□□□□ 0.55
SHKBP1-222ENST00000600320 OR51I1Q9H343 314 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms