RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 SERPINB4P48594 390 aa17.15■□□□□ 0.34
PNKP-213ENST00000599543 HSPB2Q16082 182 aa17.15■□□□□ 0.34
PNKP-213ENST00000599543 CROCCP2Q86T23 111 aa17.15■□□□□ 0.34
PNKP-213ENST00000599543 AGR3Q8TD06 166 aa17.15■□□□□ 0.34
PNKP-213ENST00000599543 KLHL29Q96CT2 875 aa17.15■□□□□ 0.34
PNKP-213ENST00000599543 PAIP2Q9BPZ3 127 aaKnown RBP17.15■□□□□ 0.34
PNKP-213ENST00000599543 ANGPTL4Q9BY76 406 aa17.15■□□□□ 0.34
PNKP-213ENST00000599543 PSME2Q9UL46 239 aa17.15■□□□□ 0.34
PNKP-213ENST00000599543 C15orf41Q9Y2V0 281 aa17.15■□□□□ 0.34
PNKP-213ENST00000599543 PTGDR2Q9Y5Y4 395 aa17.15■□□□□ 0.34
PNKP-213ENST00000599543 AHRRA9YTQ3 701 aa17.14■□□□□ 0.33
PNKP-213ENST00000599543 TMEM233B4DJY2 109 aa17.14■□□□□ 0.33
PNKP-213ENST00000599543 CRCPO75575 148 aa17.14■□□□□ 0.33
PNKP-213ENST00000599543 KRT6AP02538 564 aa17.14■□□□□ 0.33
PNKP-213ENST00000599543 KRT6BP04259 564 aa17.14■□□□□ 0.33
PNKP-213ENST00000599543 ATP1B1P05026 303 aa17.14■□□□□ 0.33
PNKP-213ENST00000599543 CSNK2A2P19784 350 aaPredicted RBP17.14■□□□□ 0.33
PNKP-213ENST00000599543 FEN1P39748 380 aaKnown RBP17.14■□□□□ 0.33
PNKP-213ENST00000599543 CASP3P42574 277 aa17.14■□□□□ 0.33
PNKP-213ENST00000599543 KRT6CP48668 564 aa17.14■□□□□ 0.33
PNKP-213ENST00000599543 HMGCS1Q01581 520 aa17.14■□□□□ 0.33
PNKP-213ENST00000599543 BTKQ06187 659 aa17.14■□□□□ 0.33
PNKP-213ENST00000599543 CRYZQ08257 329 aaKnown RBP17.14■□□□□ 0.33
PNKP-213ENST00000599543 GALNT1Q10472 559 aaPredicted RBP17.14■□□□□ 0.33
PNKP-213ENST00000599543 TOMM20Q15388 145 aa17.14■□□□□ 0.33
PNKP-213ENST00000599543 TESK1Q15569 626 aa17.14■□□□□ 0.33
PNKP-213ENST00000599543 NNATQ16517 81 aa17.14■□□□□ 0.33
PNKP-213ENST00000599543 PRICKLE4Q2TBC4 344 aa17.14■□□□□ 0.33
PNKP-213ENST00000599543 GNRHR2Q96P88 292 aa17.14■□□□□ 0.33
PNKP-213ENST00000599543 FAIM2Q9BWQ8 316 aa17.14■□□□□ 0.33
PNKP-213ENST00000599543 NXF5Q9H1B4 397 aaKnown RBP17.14■□□□□ 0.33
PNKP-213ENST00000599543 UBQLN3Q9H347 655 aa17.14■□□□□ 0.33
PNKP-213ENST00000599543 METTL7AQ9H8H3 244 aa17.14■□□□□ 0.33
PNKP-213ENST00000599543 ZNF395Q9H8N7 513 aaPredicted RBP17.14■□□□□ 0.33
PNKP-213ENST00000599543 ARGLU1Q9NWB6 273 aaPredicted RBP17.14■□□□□ 0.33
PNKP-213ENST00000599543 BCAP29Q9UHQ4 241 aa17.14■□□□□ 0.33
PNKP-213ENST00000599543 CES1P1Q9UKY3 287 aa17.14■□□□□ 0.33
PNKP-213ENST00000599543 DTX4Q9Y2E6 619 aa17.14■□□□□ 0.33
PNKP-213ENST00000599543 STK38LQ9Y2H1 464 aa17.14■□□□□ 0.33
PNKP-213ENST00000599543 L3MBTL1Q9Y468 752 aa17.14■□□□□ 0.33
PNKP-213ENST00000599543 MTORP42345 2549 aa17.14■□□□□ 0.33
PNKP-213ENST00000599543 SETD2Q9BYW2 2564 aaPredicted RBP17.14■□□□□ 0.33
PNKP-213ENST00000599543 ZFHX3Q15911 3703 aa17.13■□□□□ 0.33
PNKP-213ENST00000599543 LYPLA1O75608 230 aaPredicted RBP17.13■□□□□ 0.33
PNKP-213ENST00000599543 PPM1BO75688 479 aa17.13■□□□□ 0.33
PNKP-213ENST00000599543 HPNP05981 417 aa17.13■□□□□ 0.33
PNKP-213ENST00000599543 ENO1P06733 434 aaKnown RBP17.13■□□□□ 0.33
PNKP-213ENST00000599543 S1PR1P21453 382 aa17.13■□□□□ 0.33
PNKP-213ENST00000599543 ALDH9A1P49189 494 aa17.13■□□□□ 0.33
PNKP-213ENST00000599543 CDK9P50750 372 aaKnown RBP17.13■□□□□ 0.33
PNKP-213ENST00000599543 ACSF3Q4G176 576 aaPredicted RBP17.13■□□□□ 0.33
PNKP-213ENST00000599543 ARL13AQ5H913 290 aaPredicted RBP17.13■□□□□ 0.33
PNKP-213ENST00000599543 FNDC7Q5VTL7 733 aa17.13■□□□□ 0.33
PNKP-213ENST00000599543 ARSKQ6UWY0 536 aa17.13■□□□□ 0.33
PNKP-213ENST00000599543 SPNS3Q6ZMD2 512 aa17.13■□□□□ 0.33
PNKP-213ENST00000599543 NUDCD3Q8IVD9 361 aa17.13■□□□□ 0.33
PNKP-213ENST00000599543 PM20D2Q8IYS1 436 aa17.13■□□□□ 0.33
PNKP-213ENST00000599543 MMP21Q8N119 569 aa17.13■□□□□ 0.33
PNKP-213ENST00000599543 C1orf52Q8N6N3 182 aaKnown RBP17.13■□□□□ 0.33
PNKP-213ENST00000599543 TM4SF18Q96CE8 201 aa17.13■□□□□ 0.33
PNKP-213ENST00000599543 TLCD1Q96CP7 247 aa17.13■□□□□ 0.33
PNKP-213ENST00000599543 TMEM41AQ96HV5 264 aa17.13■□□□□ 0.33
PNKP-213ENST00000599543 ITPAQ9BY32 194 aa17.13■□□□□ 0.33
PNKP-213ENST00000599543 ACPTQ9BZG2 426 aa17.13■□□□□ 0.33
PNKP-213ENST00000599543 SSU72Q9NP77 194 aaKnown RBP17.13■□□□□ 0.33
PNKP-213ENST00000599543 MAT2BQ9NZL9 334 aa17.13■□□□□ 0.33
PNKP-213ENST00000599543 ZNF780BQ9Y6R6 833 aa17.13■□□□□ 0.33
PNKP-213ENST00000599543 MED12Q93074 2177 aa17.13■□□□□ 0.33
PNKP-213ENST00000599543 DOCK7Q96N67 2140 aa17.12■□□□□ 0.33
PNKP-213ENST00000599543 TMEM120BA0PK00 339 aa17.12■□□□□ 0.33
PNKP-213ENST00000599543 DVL2O14641 736 aa17.12■□□□□ 0.33
PNKP-213ENST00000599543 ULK1O75385 1050 aa17.12■□□□□ 0.33
PNKP-213ENST00000599543 ABCB1P08183 1280 aaPredicted RBP17.12■□□□□ 0.33
PNKP-213ENST00000599543 BMP5P22003 454 aa17.12■□□□□ 0.33
PNKP-213ENST00000599543 PEX19P40855 299 aa17.12■□□□□ 0.33
PNKP-213ENST00000599543 DLX5P56178 289 aa17.12■□□□□ 0.33
PNKP-213ENST00000599543 PLCXD2Q0VAA5 305 aa17.12■□□□□ 0.33
PNKP-213ENST00000599543 MAP4K2Q12851 820 aa17.12■□□□□ 0.33
PNKP-213ENST00000599543 EXOSC7Q15024 291 aaKnown RBP17.12■□□□□ 0.33
PNKP-213ENST00000599543 SF3B4Q15427 424 aaKnown RBP eCLIP17.12■□□□□ 0.33
PNKP-213ENST00000599543 CHI3L2Q15782 390 aa17.12■□□□□ 0.33
PNKP-213ENST00000599543 FAM111BQ6SJ93 734 aa17.12■□□□□ 0.33
PNKP-213ENST00000599543 SEM1Q6ZVN7 128 aa17.12■□□□□ 0.33
PNKP-213ENST00000599543 LACC1Q8IV20 430 aa17.12■□□□□ 0.33
PNKP-213ENST00000599543 ADCY4Q8NFM4 1077 aa17.12■□□□□ 0.33
PNKP-213ENST00000599543 PPP1R14CQ8TAE6 165 aa17.12■□□□□ 0.33
PNKP-213ENST00000599543 HSPBAP1Q96EW2 488 aa17.12■□□□□ 0.33
PNKP-213ENST00000599543 LRRC46Q96FV0 321 aa17.12■□□□□ 0.33
PNKP-213ENST00000599543 TIMP4Q99727 224 aa17.12■□□□□ 0.33
PNKP-213ENST00000599543 PRDM14Q9GZV8 571 aa17.12■□□□□ 0.33
PNKP-213ENST00000599543 STMN4Q9H169 189 aaPredicted RBP17.12■□□□□ 0.33
PNKP-213ENST00000599543 VPS29Q9UBQ0 182 aa17.12■□□□□ 0.33
PNKP-213ENST00000599543 CAMK2AQ9UQM7 478 aa17.12■□□□□ 0.33
PNKP-213ENST00000599543 SLC6A5Q9Y345 797 aa17.12■□□□□ 0.33
PNKP-213ENST00000599543 ACTL7BQ9Y614 415 aa17.12■□□□□ 0.33
PNKP-213ENST00000599543 ITPR3Q14573 2671 aa17.12■□□□□ 0.33
PNKP-213ENST00000599543 GNB5O14775 395 aa17.11■□□□□ 0.33
PNKP-213ENST00000599543 ACOX3O15254 700 aa17.11■□□□□ 0.33
PNKP-213ENST00000599543 ITM2AO43736 263 aa17.11■□□□□ 0.33
PNKP-213ENST00000599543 NPHS1O60500 1241 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms