RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 GFRA1P56159 465 aa19.23■□□□□ 0.67
PNKP-212ENST00000599454 NKX6-1P78426 367 aaPredicted RBP19.23■□□□□ 0.67
PNKP-212ENST00000599454 AAGABQ6PD74 315 aa19.23■□□□□ 0.67
PNKP-212ENST00000599454 LUZP2Q86TE4 346 aa19.23■□□□□ 0.67
PNKP-212ENST00000599454 KRTAP1-3Q8IUG1 177 aa19.23■□□□□ 0.67
PNKP-212ENST00000599454 WDSUB1Q8N9V3 476 aa19.23■□□□□ 0.67
PNKP-212ENST00000599454 SLC44A1Q8WWI5 657 aa19.23■□□□□ 0.67
PNKP-212ENST00000599454 INTS12Q96CB8 462 aaKnown RBP19.23■□□□□ 0.67
PNKP-212ENST00000599454 TMCO6Q96DC7 493 aa19.23■□□□□ 0.67
PNKP-212ENST00000599454 ELOVL6Q9H5J4 265 aa19.23■□□□□ 0.67
PNKP-212ENST00000599454 PCTPQ9UKL6 214 aa19.23■□□□□ 0.67
PNKP-212ENST00000599454 EIF3LQ9Y262 564 aaKnown RBP19.23■□□□□ 0.67
PNKP-212ENST00000599454 OR6C70A6NIJ9 312 aa19.22■□□□□ 0.67
PNKP-212ENST00000599454 A8MXE2 369 aa19.22■□□□□ 0.67
PNKP-212ENST00000599454 ARHGEF9O43307 516 aa19.22■□□□□ 0.67
PNKP-212ENST00000599454 ABCB7O75027 752 aa19.22■□□□□ 0.67
PNKP-212ENST00000599454 ERAL1O75616 437 aaKnown RBP19.22■□□□□ 0.67
PNKP-212ENST00000599454 CBX7O95931 251 aa19.22■□□□□ 0.67
PNKP-212ENST00000599454 ALDOAP04075 364 aaKnown RBP19.22■□□□□ 0.67
PNKP-212ENST00000599454 CNTFP26441 200 aa19.22■□□□□ 0.67
PNKP-212ENST00000599454 SRD5A2P31213 254 aa19.22■□□□□ 0.67
PNKP-212ENST00000599454 FEN1P39748 380 aaKnown RBP19.22■□□□□ 0.67
PNKP-212ENST00000599454 SRYQ05066 204 aa19.22■□□□□ 0.67
PNKP-212ENST00000599454 C2orf54Q08AI8 447 aa19.22■□□□□ 0.67
PNKP-212ENST00000599454 TRAF3Q13114 568 aa19.22■□□□□ 0.67
PNKP-212ENST00000599454 EXOSC7Q15024 291 aaKnown RBP19.22■□□□□ 0.67
PNKP-212ENST00000599454 POU4F3Q15319 338 aa19.22■□□□□ 0.67
PNKP-212ENST00000599454 DESI1Q6ICB0 168 aa19.22■□□□□ 0.67
PNKP-212ENST00000599454 ZDHHC24Q6UX98 284 aa19.22■□□□□ 0.67
PNKP-212ENST00000599454 COMMD6Q7Z4G1 85 aa19.22■□□□□ 0.67
PNKP-212ENST00000599454 PLCZ1Q86YW0 608 aa19.22■□□□□ 0.67
PNKP-212ENST00000599454 GBP7Q8N8V2 638 aaPredicted RBP19.22■□□□□ 0.67
PNKP-212ENST00000599454 FAIM2Q9BWQ8 316 aa19.22■□□□□ 0.67
PNKP-212ENST00000599454 VPS11Q9H270 941 aa19.22■□□□□ 0.67
PNKP-212ENST00000599454 TAS2R10Q9NYW0 307 aa19.22■□□□□ 0.67
PNKP-212ENST00000599454 PACSIN3Q9UKS6 424 aa19.22■□□□□ 0.67
PNKP-212ENST00000599454 PLLPQ9Y342 182 aa19.22■□□□□ 0.67
PNKP-212ENST00000599454 MRPS18CQ9Y3D5 142 aaKnown RBP19.22■□□□□ 0.67
PNKP-212ENST00000599454 FN1P02751 2386 aaKnown RBP19.22■□□□□ 0.67
PNKP-212ENST00000599454 TLN2Q9Y4G6 2542 aa19.21■□□□□ 0.67
PNKP-212ENST00000599454 C2orf72A6NCS6 295 aa19.21■□□□□ 0.67
PNKP-212ENST00000599454 FRG2CA6NGY1 282 aa19.21■□□□□ 0.67
PNKP-212ENST00000599454 BCAS2O75934 225 aaPredicted RBP19.21■□□□□ 0.67
PNKP-212ENST00000599454 TRA2BP62995 288 aaKnown RBP19.21■□□□□ 0.67
PNKP-212ENST00000599454 PSPHP78330 225 aa19.21■□□□□ 0.67
PNKP-212ENST00000599454 HMGCS1Q01581 520 aa19.21■□□□□ 0.67
PNKP-212ENST00000599454 UAP1Q16222 522 aaPredicted RBP19.21■□□□□ 0.67
PNKP-212ENST00000599454 MILR1Q7Z6M3 343 aa19.21■□□□□ 0.67
PNKP-212ENST00000599454 CXorf67Q86X51 503 aaPredicted RBP19.21■□□□□ 0.67
PNKP-212ENST00000599454 GRAMD2AQ8IUY3 354 aa19.21■□□□□ 0.67
PNKP-212ENST00000599454 OR52R1Q8NGF1 315 aa19.21■□□□□ 0.67
PNKP-212ENST00000599454 KLHL29Q96CT2 875 aa19.21■□□□□ 0.67
PNKP-212ENST00000599454 MRRFQ96E11 262 aaKnown RBP19.21■□□□□ 0.67
PNKP-212ENST00000599454 PHF21BQ96EK2 531 aa19.21■□□□□ 0.67
PNKP-212ENST00000599454 COL21A1Q96P44 957 aa19.21■□□□□ 0.67
PNKP-212ENST00000599454 PIP5K1AQ99755 562 aa19.21■□□□□ 0.67
PNKP-212ENST00000599454 G6PC3Q9BUM1 346 aa19.21■□□□□ 0.67
PNKP-212ENST00000599454 BRF2Q9HAW0 419 aa19.21■□□□□ 0.67
PNKP-212ENST00000599454 ZBTB26Q9HCK0 441 aa19.21■□□□□ 0.67
PNKP-212ENST00000599454 NMRK1Q9NWW6 199 aa19.21■□□□□ 0.67
PNKP-212ENST00000599454 SLC12A4Q9UP95 1085 aa19.21■□□□□ 0.67
PNKP-212ENST00000599454 DLGAP4Q9Y2H0 992 aa19.21■□□□□ 0.67
PNKP-212ENST00000599454 ZNF780BQ9Y6R6 833 aa19.21■□□□□ 0.67
PNKP-212ENST00000599454 JMJD1CQ15652 2540 aa19.21■□□□□ 0.67
PNKP-212ENST00000599454 VPS13CQ709C8 3753 aa19.21■□□□□ 0.67
PNKP-212ENST00000599454 A0A1W2PPR1 153 aa19.2■□□□□ 0.66
PNKP-212ENST00000599454 SMIM24O75264 130 aa19.2■□□□□ 0.66
PNKP-212ENST00000599454 CRHP06850 196 aa19.2■□□□□ 0.66
PNKP-212ENST00000599454 EMDP50402 254 aa19.2■□□□□ 0.66
PNKP-212ENST00000599454 LHX2P50458 406 aa19.2■□□□□ 0.66
PNKP-212ENST00000599454 CLEC9AQ6UXN8 241 aa19.2■□□□□ 0.66
PNKP-212ENST00000599454 GCNT2Q8N0V5 402 aa19.2■□□□□ 0.66
PNKP-212ENST00000599454 LRRC75A-AS1Q8N1F1 130 aa19.2■□□□□ 0.66
PNKP-212ENST00000599454 PLD6Q8N2A8 252 aaKnown RBP19.2■□□□□ 0.66
PNKP-212ENST00000599454 ADCY4Q8NFM4 1077 aa19.2■□□□□ 0.66
PNKP-212ENST00000599454 OR4F6Q8NGB9 312 aa19.2■□□□□ 0.66
PNKP-212ENST00000599454 RDH11Q8TC12 318 aa19.2■□□□□ 0.66
PNKP-212ENST00000599454 TM4SF18Q96CE8 201 aa19.2■□□□□ 0.66
PNKP-212ENST00000599454 ERP27Q96DN0 273 aa19.2■□□□□ 0.66
PNKP-212ENST00000599454 SLC35A4Q96G79 324 aa19.2■□□□□ 0.66
PNKP-212ENST00000599454 SFXN2Q96NB2 322 aa19.2■□□□□ 0.66
PNKP-212ENST00000599454 SMR3AQ99954 134 aa19.2■□□□□ 0.66
PNKP-212ENST00000599454 GRPEL1Q9HAV7 217 aa19.2■□□□□ 0.66
PNKP-212ENST00000599454 EHD3Q9NZN3 535 aa19.2■□□□□ 0.66
PNKP-212ENST00000599454 GPR55Q9Y2T6 319 aaPredicted RBP19.2■□□□□ 0.66
PNKP-212ENST00000599454 TESMINQ9Y4I5 508 aa19.2■□□□□ 0.66
PNKP-212ENST00000599454 WIF1Q9Y5W5 379 aa19.2■□□□□ 0.66
PNKP-212ENST00000599454 PCNX3Q9H6A9 2034 aa19.2■□□□□ 0.66
PNKP-212ENST00000599454 TNFSF12-TNFSF13A0A0A6YY99 330 aa19.19■□□□□ 0.66
PNKP-212ENST00000599454 PLOD2O00469 737 aa19.19■□□□□ 0.66
PNKP-212ENST00000599454 MSTNO14793 375 aa19.19■□□□□ 0.66
PNKP-212ENST00000599454 HCRTR2O43614 444 aa19.19■□□□□ 0.66
PNKP-212ENST00000599454 REM1O75628 298 aa19.19■□□□□ 0.66
PNKP-212ENST00000599454 TNFSF13O75888 250 aa19.19■□□□□ 0.66
PNKP-212ENST00000599454 HEXAP06865 529 aa19.19■□□□□ 0.66
PNKP-212ENST00000599454 ZNF708P17019 499 aa19.19■□□□□ 0.66
PNKP-212ENST00000599454 PHBP35232 272 aa19.19■□□□□ 0.66
PNKP-212ENST00000599454 CLDN18P56856 261 aa19.19■□□□□ 0.66
PNKP-212ENST00000599454 GALNT1Q10472 559 aaPredicted RBP19.19■□□□□ 0.66
PNKP-212ENST00000599454 EFR3AQ14156 821 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms