RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 PRR5P85299 388 aa18.13■□□□□ 0.49
SHKBP1-214ENST00000597396 ZNHIT3Q15649 155 aaPredicted RBP18.13■□□□□ 0.49
SHKBP1-214ENST00000597396 ZNF791Q3KP31 576 aaPredicted RBP18.13■□□□□ 0.49
SHKBP1-214ENST00000597396 SPANXN4Q5MJ08 99 aa18.13■□□□□ 0.49
SHKBP1-214ENST00000597396 VPS37AQ8NEZ2 397 aa18.13■□□□□ 0.49
SHKBP1-214ENST00000597396 NUP43Q8NFH3 380 aa18.13■□□□□ 0.49
SHKBP1-214ENST00000597396 OR8J2Q8NGG1 315 aa18.13■□□□□ 0.49
SHKBP1-214ENST00000597396 GRHL3Q8TE85 626 aa18.13■□□□□ 0.49
SHKBP1-214ENST00000597396 BTBD9Q96Q07 612 aa18.13■□□□□ 0.49
SHKBP1-214ENST00000597396 NEUROD4Q9HD90 331 aa18.13■□□□□ 0.49
SHKBP1-214ENST00000597396 NPHS2Q9NP85 383 aa18.13■□□□□ 0.49
SHKBP1-214ENST00000597396 EQTNQ9NQ60 294 aa18.13■□□□□ 0.49
SHKBP1-214ENST00000597396 PCDHGB4Q9UN71 923 aa18.13■□□□□ 0.49
SHKBP1-214ENST00000597396 NTNG1Q9Y2I2 539 aa18.13■□□□□ 0.49
SHKBP1-214ENST00000597396 GPR55Q9Y2T6 319 aaPredicted RBP18.13■□□□□ 0.49
SHKBP1-214ENST00000597396 ZGRF1Q86YA3 2104 aa18.13■□□□□ 0.49
SHKBP1-214ENST00000597396 KLRC4-KLRK1H3BQV0 150 aa18.12■□□□□ 0.49
SHKBP1-214ENST00000597396 TP53I11O14683 189 aa18.12■□□□□ 0.49
SHKBP1-214ENST00000597396 P04436 131 aa18.12■□□□□ 0.49
SHKBP1-214ENST00000597396 ABCD3P28288 659 aa18.12■□□□□ 0.49
SHKBP1-214ENST00000597396 SOAT1P35610 550 aa18.12■□□□□ 0.49
SHKBP1-214ENST00000597396 MDH1P40925 334 aaKnown RBP18.12■□□□□ 0.49
SHKBP1-214ENST00000597396 CORO7P57737 925 aa18.12■□□□□ 0.49
SHKBP1-214ENST00000597396 STX1BP61266 288 aa18.12■□□□□ 0.49
SHKBP1-214ENST00000597396 PMP22Q01453 160 aa18.12■□□□□ 0.49
SHKBP1-214ENST00000597396 PLCXD2Q0VAA5 305 aa18.12■□□□□ 0.49
SHKBP1-214ENST00000597396 NTRK2Q16620 822 aa18.12■□□□□ 0.49
SHKBP1-214ENST00000597396 FAM174BQ3ZCQ3 159 aa18.12■□□□□ 0.49
SHKBP1-214ENST00000597396 SPDYE7PQ495Y7 208 aa18.12■□□□□ 0.49
SHKBP1-214ENST00000597396 ANXA8L1Q5VT79 327 aa18.12■□□□□ 0.49
SHKBP1-214ENST00000597396 PNPLA5Q7Z6Z6 429 aaPredicted RBP18.12■□□□□ 0.49
SHKBP1-214ENST00000597396 SLC44A2Q8IWA5 706 aaPredicted RBP18.12■□□□□ 0.49
SHKBP1-214ENST00000597396 SLC34A3Q8N130 599 aa18.12■□□□□ 0.49
SHKBP1-214ENST00000597396 BCORP1Q8N888 145 aa18.12■□□□□ 0.49
SHKBP1-214ENST00000597396 OR5M3Q8NGP4 307 aa18.12■□□□□ 0.49
SHKBP1-214ENST00000597396 OMA1Q96E52 524 aa18.12■□□□□ 0.49
SHKBP1-214ENST00000597396 TEX37Q96LM6 180 aa18.12■□□□□ 0.49
SHKBP1-214ENST00000597396 MS4A4EQ96PG1 132 aa18.12■□□□□ 0.49
SHKBP1-214ENST00000597396 TAAR6Q96RI8 345 aa18.12■□□□□ 0.49
SHKBP1-214ENST00000597396 SIKE1Q9BRV8 207 aa18.12■□□□□ 0.49
SHKBP1-214ENST00000597396 SIRT3Q9NTG7 399 aaPredicted RBP18.12■□□□□ 0.49
SHKBP1-214ENST00000597396 SACM1LQ9NTJ5 587 aa18.12■□□□□ 0.49
SHKBP1-214ENST00000597396 ZCCHC3Q9NUD5 404 aaKnown RBP18.12■□□□□ 0.49
SHKBP1-214ENST00000597396 ZIM2Q9NZV7 527 aa18.12■□□□□ 0.49
SHKBP1-214ENST00000597396 DCTN4Q9UJW0 460 aa18.12■□□□□ 0.49
SHKBP1-214ENST00000597396 OR10H1Q9Y4A9 318 aa18.12■□□□□ 0.49
SHKBP1-214ENST00000597396 NBASA2RRP1 2371 aa18.11■□□□□ 0.49
SHKBP1-214ENST00000597396 HECTD1Q9ULT8 2610 aa18.11■□□□□ 0.49
SHKBP1-214ENST00000597396 C9JVG2 144 aa18.11■□□□□ 0.49
SHKBP1-214ENST00000597396 RNASET2O00584 256 aaKnown RBP18.11■□□□□ 0.49
SHKBP1-214ENST00000597396 PEX1O43933 1283 aa18.11■□□□□ 0.49
SHKBP1-214ENST00000597396 SLC22A3O75751 556 aa18.11■□□□□ 0.49
SHKBP1-214ENST00000597396 PSMG1O95456 288 aa18.11■□□□□ 0.49
SHKBP1-214ENST00000597396 CRYABP02511 175 aaKnown RBP18.11■□□□□ 0.49
SHKBP1-214ENST00000597396 CCL3P10147 92 aa18.11■□□□□ 0.49
SHKBP1-214ENST00000597396 TROVE2P10155 538 aaKnown RBP eCLIP18.11■□□□□ 0.49
SHKBP1-214ENST00000597396 KRT20P35900 424 aa18.11■□□□□ 0.49
SHKBP1-214ENST00000597396 MEOX1P50221 254 aa18.11■□□□□ 0.49
SHKBP1-214ENST00000597396 WNT3P56703 355 aa18.11■□□□□ 0.49
SHKBP1-214ENST00000597396 FBXW4P57775 412 aa18.11■□□□□ 0.49
SHKBP1-214ENST00000597396 GPR85P60893 370 aa18.11■□□□□ 0.49
SHKBP1-214ENST00000597396 SLC22A10Q63ZE4 541 aa18.11■□□□□ 0.49
SHKBP1-214ENST00000597396 NPSR1Q6W5P4 371 aa18.11■□□□□ 0.49
SHKBP1-214ENST00000597396 SULF2Q8IWU5 870 aa18.11■□□□□ 0.49
SHKBP1-214ENST00000597396 CLECL1Q8IZS7 167 aa18.11■□□□□ 0.49
SHKBP1-214ENST00000597396 MIER2Q8N344 545 aa18.11■□□□□ 0.49
SHKBP1-214ENST00000597396 GLB1L3Q8NCI6 653 aaPredicted RBP18.11■□□□□ 0.49
SHKBP1-214ENST00000597396 OR10G3Q8NGC4 313 aa18.11■□□□□ 0.49
SHKBP1-214ENST00000597396 RFWD2Q8NHY2 731 aa18.11■□□□□ 0.49
SHKBP1-214ENST00000597396 FAM120BQ96EK7 910 aaKnown RBP18.11■□□□□ 0.49
SHKBP1-214ENST00000597396 CCDC134Q9H6E4 229 aa18.11■□□□□ 0.49
SHKBP1-214ENST00000597396 CXorf36Q9H7Y0 433 aa18.11■□□□□ 0.49
SHKBP1-214ENST00000597396 FGFR1OP2Q9NVK5 253 aa18.11■□□□□ 0.49
SHKBP1-214ENST00000597396 FAM120CQ9NX05 1096 aaKnown RBP18.11■□□□□ 0.49
SHKBP1-214ENST00000597396 NTMQ9P121 344 aa18.11■□□□□ 0.49
SHKBP1-214ENST00000597396 TTC36A6NLP5 189 aa18.1■□□□□ 0.49
SHKBP1-214ENST00000597396 TO15178 435 aa18.1■□□□□ 0.49
SHKBP1-214ENST00000597396 REM1O75628 298 aa18.1■□□□□ 0.49
SHKBP1-214ENST00000597396 PPM1BO75688 479 aa18.1■□□□□ 0.49
SHKBP1-214ENST00000597396 CPSF4O95639 269 aaKnown RBP18.1■□□□□ 0.49
SHKBP1-214ENST00000597396 CT45A8P0DMV1 189 aa18.1■□□□□ 0.49
SHKBP1-214ENST00000597396 CT45A9P0DMV2 189 aa18.1■□□□□ 0.49
SHKBP1-214ENST00000597396 NAGAP17050 411 aa18.1■□□□□ 0.49
SHKBP1-214ENST00000597396 IL12AP29459 219 aa18.1■□□□□ 0.49
SHKBP1-214ENST00000597396 CCT3P49368 545 aaKnown RBP18.1■□□□□ 0.49
SHKBP1-214ENST00000597396 DGKQP52824 942 aa18.1■□□□□ 0.49
SHKBP1-214ENST00000597396 HBA1P69905 142 aa18.1■□□□□ 0.49
SHKBP1-214ENST00000597396 PSPHP78330 225 aa18.1■□□□□ 0.49
SHKBP1-214ENST00000597396 RPP38P78345 283 aaKnown RBP18.1■□□□□ 0.49
SHKBP1-214ENST00000597396 CT45A2Q5DJT8 189 aa18.1■□□□□ 0.49
SHKBP1-214ENST00000597396 WDR53Q7Z5U6 358 aaPredicted RBP18.1■□□□□ 0.49
SHKBP1-214ENST00000597396 ANKRD46Q86W74 232 aa18.1■□□□□ 0.49
SHKBP1-214ENST00000597396 CPSF7Q8N684 471 aaKnown RBP18.1■□□□□ 0.49
SHKBP1-214ENST00000597396 OR56A1Q8NGH5 318 aa18.1■□□□□ 0.49
SHKBP1-214ENST00000597396 OR4A15Q8NGL6 344 aa18.1■□□□□ 0.49
SHKBP1-214ENST00000597396 DNAJB8Q8NHS0 232 aa18.1■□□□□ 0.49
SHKBP1-214ENST00000597396 PSMA8Q8TAA3 256 aa18.1■□□□□ 0.49
SHKBP1-214ENST00000597396 SFXN5Q8TD22 340 aa18.1■□□□□ 0.49
SHKBP1-214ENST00000597396 FAR1Q8WVX9 515 aa18.1■□□□□ 0.49
SHKBP1-214ENST00000597396 TMBIM1Q969X1 311 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms