RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 PRSS53Q2L4Q9 553 aa9.63□□□□□ -0.87
CCDC9-203ENST00000596938 ERCC6LQ2NKX8 1250 aa9.63□□□□□ -0.87
CCDC9-203ENST00000596938 CT45A2Q5DJT8 189 aa9.63□□□□□ -0.87
CCDC9-203ENST00000596938 BICRALQ6AI39 1079 aa9.63□□□□□ -0.87
CCDC9-203ENST00000596938 CLEC6AQ6EIG7 209 aa9.63□□□□□ -0.87
CCDC9-203ENST00000596938 RTL6Q6ICC9 239 aa9.63□□□□□ -0.87
CCDC9-203ENST00000596938 SLC30A6Q6NXT4 461 aa9.63□□□□□ -0.87
CCDC9-203ENST00000596938 ZNF585AQ6P3V2 769 aa9.63□□□□□ -0.87
CCDC9-203ENST00000596938 MCEMP1Q8IX19 187 aa9.63□□□□□ -0.87
CCDC9-203ENST00000596938 FAM9CQ8IZT9 166 aa9.63□□□□□ -0.87
CCDC9-203ENST00000596938 CLYBLQ8N0X4 340 aa9.63□□□□□ -0.87
CCDC9-203ENST00000596938 RPRMLQ8N4K4 120 aa9.63□□□□□ -0.87
CCDC9-203ENST00000596938 MREGQ8N565 214 aa9.63□□□□□ -0.87
CCDC9-203ENST00000596938 ACBD4Q8NC06 268 aa9.63□□□□□ -0.87
CCDC9-203ENST00000596938 KAT2AQ92830 837 aa9.63□□□□□ -0.87
CCDC9-203ENST00000596938 OMA1Q96E52 524 aa9.63□□□□□ -0.87
CCDC9-203ENST00000596938 FCRL1Q96LA6 429 aa9.63□□□□□ -0.87
CCDC9-203ENST00000596938 VSTM2LQ96N03 204 aa9.63□□□□□ -0.87
CCDC9-203ENST00000596938 TTYH2Q9BSA4 534 aa9.63□□□□□ -0.87
CCDC9-203ENST00000596938 ENKD1Q9H0I2 346 aa9.63□□□□□ -0.87
CCDC9-203ENST00000596938 EXO5Q9H790 373 aa9.63□□□□□ -0.87
CCDC9-203ENST00000596938 METTL7AQ9H8H3 244 aa9.63□□□□□ -0.87
CCDC9-203ENST00000596938 LRTM1Q9HBL6 345 aa9.63□□□□□ -0.87
CCDC9-203ENST00000596938 MIEF1Q9NQG6 463 aa9.63□□□□□ -0.87
CCDC9-203ENST00000596938 C1orf109Q9NX04 203 aa9.63□□□□□ -0.87
CCDC9-203ENST00000596938 TAS2R9Q9NYW1 312 aa9.63□□□□□ -0.87
CCDC9-203ENST00000596938 SPRR3Q9UBC9 169 aa9.63□□□□□ -0.87
CCDC9-203ENST00000596938 EXO1Q9UQ84 846 aaKnown RBP9.63□□□□□ -0.87
CCDC9-203ENST00000596938 RNF6Q9Y252 685 aa9.63□□□□□ -0.87
CCDC9-203ENST00000596938 DCHS2Q6V1P9 2916 aa9.62□□□□□ -0.87
CCDC9-203ENST00000596938 AHRRA9YTQ3 701 aa9.62□□□□□ -0.87
CCDC9-203ENST00000596938 FAM47E-STBD1D6RA91 191 aa9.62□□□□□ -0.87
CCDC9-203ENST00000596938 TBX19O60806 448 aa9.62□□□□□ -0.87
CCDC9-203ENST00000596938 UGT2B11O75310 529 aa9.62□□□□□ -0.87
CCDC9-203ENST00000596938 ERN1O75460 977 aaKnown RBP9.62□□□□□ -0.87
CCDC9-203ENST00000596938 CHEK2O96017 543 aa9.62□□□□□ -0.87
CCDC9-203ENST00000596938 IFI6P09912 130 aa9.62□□□□□ -0.87
CCDC9-203ENST00000596938 GLI4P10075 376 aa9.62□□□□□ -0.87
CCDC9-203ENST00000596938 NEFHP12036 1026 aa9.62□□□□□ -0.87
CCDC9-203ENST00000596938 COX6B1P14854 86 aa9.62□□□□□ -0.87
CCDC9-203ENST00000596938 GDF1P27539 372 aa9.62□□□□□ -0.87
CCDC9-203ENST00000596938 SERPINB5P36952 375 aa9.62□□□□□ -0.87
CCDC9-203ENST00000596938 PTGDSP41222 190 aa9.62□□□□□ -0.87
CCDC9-203ENST00000596938 MASP1P48740 699 aa9.62□□□□□ -0.87
CCDC9-203ENST00000596938 CDK9P50750 372 aaKnown RBP9.62□□□□□ -0.87
CCDC9-203ENST00000596938 NUP107P57740 925 aa9.62□□□□□ -0.87
CCDC9-203ENST00000596938 UGT3A2Q3SY77 523 aa9.62□□□□□ -0.87
CCDC9-203ENST00000596938 ARL13AQ5H913 290 aaPredicted RBP9.62□□□□□ -0.87
CCDC9-203ENST00000596938 KANK2Q63ZY3 851 aa9.62□□□□□ -0.87
CCDC9-203ENST00000596938 B3GNT6Q6ZMB0 384 aa9.62□□□□□ -0.87
CCDC9-203ENST00000596938 SRRM1Q8IYB3 904 aaKnown RBP9.62□□□□□ -0.87
CCDC9-203ENST00000596938 LIX1Q8N485 282 aa9.62□□□□□ -0.87
CCDC9-203ENST00000596938 OR7G2Q8NG99 324 aa9.62□□□□□ -0.87
CCDC9-203ENST00000596938 TCP10LQ8TDR4 215 aa9.62□□□□□ -0.87
CCDC9-203ENST00000596938 TMBIM1Q969X1 311 aa9.62□□□□□ -0.87
CCDC9-203ENST00000596938 TMCO6Q96DC7 493 aa9.62□□□□□ -0.87
CCDC9-203ENST00000596938 SLC35A4Q96G79 324 aa9.62□□□□□ -0.87
CCDC9-203ENST00000596938 ZNF764Q96H86 408 aaPredicted RBP9.62□□□□□ -0.87
CCDC9-203ENST00000596938 EGLN2Q96KS0 407 aa9.62□□□□□ -0.87
CCDC9-203ENST00000596938 COL21A1Q96P44 957 aa9.62□□□□□ -0.87
CCDC9-203ENST00000596938 FAM111AQ96PZ2 611 aa9.62□□□□□ -0.87
CCDC9-203ENST00000596938 NODALQ96S42 347 aa9.62□□□□□ -0.87
CCDC9-203ENST00000596938 TIMP4Q99727 224 aa9.62□□□□□ -0.87
CCDC9-203ENST00000596938 TREX2Q9BQ50 279 aaPredicted RBP9.62□□□□□ -0.87
CCDC9-203ENST00000596938 PARD6BQ9BYG5 372 aa9.62□□□□□ -0.87
CCDC9-203ENST00000596938 TUBB1Q9H4B7 451 aa9.62□□□□□ -0.87
CCDC9-203ENST00000596938 ANKRA2Q9H9E1 313 aa9.62□□□□□ -0.87
CCDC9-203ENST00000596938 EML4Q9HC35 981 aaKnown RBP9.62□□□□□ -0.87
CCDC9-203ENST00000596938 SLC17A7Q9P2U7 560 aa9.62□□□□□ -0.87
CCDC9-203ENST00000596938 TNFRSF10DQ9UBN6 386 aa9.62□□□□□ -0.87
CCDC9-203ENST00000596938 C19orf53Q9UNZ5 99 aaPredicted RBP9.62□□□□□ -0.87
CCDC9-203ENST00000596938 C15orf41Q9Y2V0 281 aa9.62□□□□□ -0.87
CCDC9-203ENST00000596938 TMED5Q9Y3A6 229 aa9.62□□□□□ -0.87
CCDC9-203ENST00000596938 TRAF6Q9Y4K3 522 aa9.62□□□□□ -0.87
CCDC9-203ENST00000596938 POLR3HQ9Y535 204 aaPredicted RBP9.62□□□□□ -0.87
CCDC9-203ENST00000596938 FAM215AQ9Y5M1 114 aa9.62□□□□□ -0.87
CCDC9-203ENST00000596938 DNAJC15Q9Y5T4 150 aa9.62□□□□□ -0.87
CCDC9-203ENST00000596938 APCP25054 2843 aa9.62□□□□□ -0.87
CCDC9-203ENST00000596938 FBN2P35556 2912 aa9.62□□□□□ -0.87
CCDC9-203ENST00000596938 C19orf84I3L1E1 186 aa9.61□□□□□ -0.87
CCDC9-203ENST00000596938 UPK1AO00322 258 aa9.61□□□□□ -0.87
CCDC9-203ENST00000596938 TYROBPO43914 113 aa9.61□□□□□ -0.87
CCDC9-203ENST00000596938 TSPAN2O60636 221 aa9.61□□□□□ -0.87
CCDC9-203ENST00000596938 COQ9O75208 318 aa9.61□□□□□ -0.87
CCDC9-203ENST00000596938 SPAG7O75391 227 aa9.61□□□□□ -0.87
CCDC9-203ENST00000596938 REM1O75628 298 aa9.61□□□□□ -0.87
CCDC9-203ENST00000596938 CBR3O75828 277 aa9.61□□□□□ -0.87
CCDC9-203ENST00000596938 TRAPPC6AO75865 159 aa9.61□□□□□ -0.87
CCDC9-203ENST00000596938 PSMG1O95456 288 aa9.61□□□□□ -0.87
CCDC9-203ENST00000596938 JUNP05412 331 aaKnown RBP9.61□□□□□ -0.87
CCDC9-203ENST00000596938 TUBBP07437 444 aa9.61□□□□□ -0.87
CCDC9-203ENST00000596938 CHRNGP07510 517 aa9.61□□□□□ -0.87
CCDC9-203ENST00000596938 LINC00032P0C843 101 aa9.61□□□□□ -0.87
CCDC9-203ENST00000596938 TACR1P25103 407 aa9.61□□□□□ -0.87
CCDC9-203ENST00000596938 PTPN6P29350 595 aa9.61□□□□□ -0.87
CCDC9-203ENST00000596938 TRPC1P48995 793 aa9.61□□□□□ -0.87
CCDC9-203ENST00000596938 NCBP2P52298 156 aaKnown RBP eCLIP9.61□□□□□ -0.87
CCDC9-203ENST00000596938 PNLIPRP2P54317 469 aa9.61□□□□□ -0.87
CCDC9-203ENST00000596938 CORO7P57737 925 aa9.61□□□□□ -0.87
CCDC9-203ENST00000596938 EFR3AQ14156 821 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms