RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 UBQLN3Q9H347 655 aa11.97□□□□□ -0.49
USE1-207ENST00000596136 TP63Q9H3D4 680 aaPredicted RBP11.97□□□□□ -0.49
USE1-207ENST00000596136 PFDN4Q9NQP4 134 aa11.97□□□□□ -0.49
USE1-207ENST00000596136 LIPGQ9Y5X9 500 aa11.97□□□□□ -0.49
USE1-207ENST00000596136 ATP6AP2A0A1C7CYW4 349 aa11.96□□□□□ -0.49
USE1-207ENST00000596136 TMEM233B4DJY2 109 aa11.96□□□□□ -0.49
USE1-207ENST00000596136 BCKDKO14874 412 aa11.96□□□□□ -0.49
USE1-207ENST00000596136 RGS16O15492 202 aaPredicted RBP11.96□□□□□ -0.49
USE1-207ENST00000596136 CTIFO43310 598 aaKnown RBP11.96□□□□□ -0.49
USE1-207ENST00000596136 ATP6AP2O75787 350 aa11.96□□□□□ -0.49
USE1-207ENST00000596136 PSMG1O95456 288 aa11.96□□□□□ -0.49
USE1-207ENST00000596136 LINC00032P0C843 101 aa11.96□□□□□ -0.49
USE1-207ENST00000596136 DHRS4L1P0CG22 281 aa11.96□□□□□ -0.49
USE1-207ENST00000596136 SDC1P18827 310 aa11.96□□□□□ -0.49
USE1-207ENST00000596136 SNTA1Q13424 505 aa11.96□□□□□ -0.49
USE1-207ENST00000596136 GXYLT1Q4G148 440 aa11.96□□□□□ -0.49
USE1-207ENST00000596136 XKR7Q5GH72 579 aa11.96□□□□□ -0.49
USE1-207ENST00000596136 TMEM198Q66K66 360 aa11.96□□□□□ -0.49
USE1-207ENST00000596136 BICRALQ6AI39 1079 aa11.96□□□□□ -0.49
USE1-207ENST00000596136 SP5Q6BEB4 398 aaPredicted RBP11.96□□□□□ -0.49
USE1-207ENST00000596136 ZCCHC23Q6ZST2 131 aa11.96□□□□□ -0.49
USE1-207ENST00000596136 PRR22Q8IZ63 422 aa11.96□□□□□ -0.49
USE1-207ENST00000596136 OR2L13Q8N349 312 aa11.96□□□□□ -0.49
USE1-207ENST00000596136 MARVELD2Q8N4S9 558 aa11.96□□□□□ -0.49
USE1-207ENST00000596136 RNF138Q8WVD3 245 aa11.96□□□□□ -0.49
USE1-207ENST00000596136 TWIST2Q8WVJ9 160 aa11.96□□□□□ -0.49
USE1-207ENST00000596136 OMA1Q96E52 524 aa11.96□□□□□ -0.49
USE1-207ENST00000596136 SLC35A4Q96G79 324 aa11.96□□□□□ -0.49
USE1-207ENST00000596136 TMEM41AQ96HV5 264 aa11.96□□□□□ -0.49
USE1-207ENST00000596136 ZNF597Q96LX8 424 aa11.96□□□□□ -0.49
USE1-207ENST00000596136 RILPQ96NA2 401 aa11.96□□□□□ -0.49
USE1-207ENST00000596136 AMDHD1Q96NU7 426 aa11.96□□□□□ -0.49
USE1-207ENST00000596136 GLIPR2Q9H4G4 154 aa11.96□□□□□ -0.49
USE1-207ENST00000596136 ANKRA2Q9H9E1 313 aa11.96□□□□□ -0.49
USE1-207ENST00000596136 MIEF1Q9NQG6 463 aa11.96□□□□□ -0.49
USE1-207ENST00000596136 TAS2R9Q9NYW1 312 aa11.96□□□□□ -0.49
USE1-207ENST00000596136 ZDHHC2Q9UIJ5 367 aa11.96□□□□□ -0.49
USE1-207ENST00000596136 C19orf53Q9UNZ5 99 aaPredicted RBP11.96□□□□□ -0.49
USE1-207ENST00000596136 PCDHGB3Q9Y5G1 929 aa11.96□□□□□ -0.49
USE1-207ENST00000596136 ACTL7BQ9Y614 415 aa11.96□□□□□ -0.49
USE1-207ENST00000596136 PKDREJQ9NTG1 2253 aa11.96□□□□□ -0.49
USE1-207ENST00000596136 TRGV5A0A0B4J1U4 118 aa11.95□□□□□ -0.5
USE1-207ENST00000596136 OR6C70A6NIJ9 312 aa11.95□□□□□ -0.5
USE1-207ENST00000596136 NPIPA2E9PIF3 369 aa11.95□□□□□ -0.5
USE1-207ENST00000596136 NPIPA3F8WFD2 350 aa11.95□□□□□ -0.5
USE1-207ENST00000596136 PIP5K1BO14986 540 aa11.95□□□□□ -0.5
USE1-207ENST00000596136 TM9SF1O15321 606 aa11.95□□□□□ -0.5
USE1-207ENST00000596136 BIRC5O15392 142 aa11.95□□□□□ -0.5
USE1-207ENST00000596136 TSPAN2O60636 221 aa11.95□□□□□ -0.5
USE1-207ENST00000596136 ABCB7O75027 752 aa11.95□□□□□ -0.5
USE1-207ENST00000596136 UGT2B11O75310 529 aa11.95□□□□□ -0.5
USE1-207ENST00000596136 LRATO95237 230 aa11.95□□□□□ -0.5
USE1-207ENST00000596136 JUNP05412 331 aaKnown RBP11.95□□□□□ -0.5
USE1-207ENST00000596136 ENDOUP21128 410 aaKnown RBP11.95□□□□□ -0.5
USE1-207ENST00000596136 PTGDSP41222 190 aa11.95□□□□□ -0.5
USE1-207ENST00000596136 FRKP42685 505 aaPredicted RBP11.95□□□□□ -0.5
USE1-207ENST00000596136 SERPINB4P48594 390 aa11.95□□□□□ -0.5
USE1-207ENST00000596136 MAN2A2P49641 1150 aa11.95□□□□□ -0.5
USE1-207ENST00000596136 NCBP2P52298 156 aaKnown RBP eCLIP11.95□□□□□ -0.5
USE1-207ENST00000596136 PLCXD2Q0VAA5 305 aa11.95□□□□□ -0.5
USE1-207ENST00000596136 PDE7AQ13946 482 aa11.95□□□□□ -0.5
USE1-207ENST00000596136 NNATQ16517 81 aa11.95□□□□□ -0.5
USE1-207ENST00000596136 ZNF630Q2M218 657 aaPredicted RBP11.95□□□□□ -0.5
USE1-207ENST00000596136 SH2D4BQ5SQS7 431 aa11.95□□□□□ -0.5
USE1-207ENST00000596136 CES4AQ5XG92 561 aa11.95□□□□□ -0.5
USE1-207ENST00000596136 TIGD3Q6B0B8 471 aa11.95□□□□□ -0.5
USE1-207ENST00000596136 ZNF787Q6DD87 383 aa11.95□□□□□ -0.5
USE1-207ENST00000596136 TMEM211Q6ICI0 200 aa11.95□□□□□ -0.5
USE1-207ENST00000596136 SLC30A6Q6NXT4 461 aa11.95□□□□□ -0.5
USE1-207ENST00000596136 LRIG3Q6UXM1 1119 aa11.95□□□□□ -0.5
USE1-207ENST00000596136 NPSR1Q6W5P4 371 aa11.95□□□□□ -0.5
USE1-207ENST00000596136 C3P1Q6ZMU1 363 aa11.95□□□□□ -0.5
USE1-207ENST00000596136 CROCCP2Q86T23 111 aa11.95□□□□□ -0.5
USE1-207ENST00000596136 PACS2Q86VP3 889 aa11.95□□□□□ -0.5
USE1-207ENST00000596136 NEIL3Q8TAT5 605 aa11.95□□□□□ -0.5
USE1-207ENST00000596136 ELP4Q96EB1 424 aa11.95□□□□□ -0.5
USE1-207ENST00000596136 PGM2Q96G03 612 aa11.95□□□□□ -0.5
USE1-207ENST00000596136 ZIM3Q96PE6 472 aa11.95□□□□□ -0.5
USE1-207ENST00000596136 NODALQ96S42 347 aa11.95□□□□□ -0.5
USE1-207ENST00000596136 REEP4Q9H6H4 257 aa11.95□□□□□ -0.5
USE1-207ENST00000596136 FOLH1BQ9HBA9 442 aa11.95□□□□□ -0.5
USE1-207ENST00000596136 B4GALT7Q9UBV7 327 aa11.95□□□□□ -0.5
USE1-207ENST00000596136 FIS1Q9Y3D6 152 aa11.95□□□□□ -0.5
USE1-207ENST00000596136 PRSS44E7EML9 344 aa11.94□□□□□ -0.5
USE1-207ENST00000596136 UPK1AO00322 258 aa11.94□□□□□ -0.5
USE1-207ENST00000596136 COQ9O75208 318 aa11.94□□□□□ -0.5
USE1-207ENST00000596136 ERN1O75460 977 aaKnown RBP11.94□□□□□ -0.5
USE1-207ENST00000596136 CLDN14O95500 239 aa11.94□□□□□ -0.5
USE1-207ENST00000596136 HPNP05981 417 aa11.94□□□□□ -0.5
USE1-207ENST00000596136 HOXD4P09016 255 aaPredicted RBP11.94□□□□□ -0.5
USE1-207ENST00000596136 BCKDHAP12694 445 aa11.94□□□□□ -0.5
USE1-207ENST00000596136 ELAVL4P26378 380 aaKnown RBP11.94□□□□□ -0.5
USE1-207ENST00000596136 NTSP30990 170 aa11.94□□□□□ -0.5
USE1-207ENST00000596136 PNLIPRP2P54317 469 aa11.94□□□□□ -0.5
USE1-207ENST00000596136 CORO7P57737 925 aa11.94□□□□□ -0.5
USE1-207ENST00000596136 PSG6Q00889 435 aa11.94□□□□□ -0.5
USE1-207ENST00000596136 MPP2Q14168 576 aa11.94□□□□□ -0.5
USE1-207ENST00000596136 CDSNQ15517 529 aa11.94□□□□□ -0.5
USE1-207ENST00000596136 CEP85LQ5SZL2 805 aa11.94□□□□□ -0.5
USE1-207ENST00000596136 DESI1Q6ICB0 168 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 351.1 ms